RNA–Protein interactions for RNA: ENST00000465415.1

CNKSR1-203, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-203ENST00000465415 BHMT2Q9H2M3 363 aa13.96□□□□□ -0.17
CNKSR1-203ENST00000465415 ZSCAN16Q9H4T2 348 aaPredicted RBP13.96□□□□□ -0.17
CNKSR1-203ENST00000465415 IFT122Q9HBG6 1241 aa13.96□□□□□ -0.17
CNKSR1-203ENST00000465415 RNF216Q9NWF9 866 aaPredicted RBP13.96□□□□□ -0.17
CNKSR1-203ENST00000465415 MTUS1Q9ULD2 1270 aa13.96□□□□□ -0.17
CNKSR1-203ENST00000465415 C9IYK1 514 aa13.95□□□□□ -0.18
CNKSR1-203ENST00000465415 DGKIO75912 1065 aa13.95□□□□□ -0.18
CNKSR1-203ENST00000465415 ARL2P36404 184 aa13.95□□□□□ -0.18
CNKSR1-203ENST00000465415 CAPSQ13938 189 aa13.95□□□□□ -0.18
CNKSR1-203ENST00000465415 ZRSR1Q15695 479 aaKnown RBP13.95□□□□□ -0.18
CNKSR1-203ENST00000465415 FAM173BQ6P4H8 233 aa13.95□□□□□ -0.18
CNKSR1-203ENST00000465415 MAEAQ7L5Y9 396 aa13.95□□□□□ -0.18
CNKSR1-203ENST00000465415 SRGAP1Q7Z6B7 1085 aa13.95□□□□□ -0.18
CNKSR1-203ENST00000465415 CRIPAKQ8N1N5 446 aa13.95□□□□□ -0.18
CNKSR1-203ENST00000465415 ASAP3Q8TDY4 903 aa13.95□□□□□ -0.18
CNKSR1-203ENST00000465415 AK8Q96MA6 479 aa13.95□□□□□ -0.18
CNKSR1-203ENST00000465415 MMTAG2Q9BU76 263 aaKnown RBP13.95□□□□□ -0.18
CNKSR1-203ENST00000465415 RC3H2Q9HBD1 1191 aaKnown RBP13.95□□□□□ -0.18
CNKSR1-203ENST00000465415 GPRC5CQ9NQ84 441 aa13.95□□□□□ -0.18
CNKSR1-203ENST00000465415 PIN4Q9Y237 131 aaKnown RBP13.95□□□□□ -0.18
CNKSR1-203ENST00000465415 PCDHB7Q9Y5E2 793 aa13.95□□□□□ -0.18
CNKSR1-203ENST00000465415 CLIC4Q9Y696 253 aa13.95□□□□□ -0.18
CNKSR1-203ENST00000465415 COL4A4P53420 1690 aaPredicted RBP13.95□□□□□ -0.18
CNKSR1-203ENST00000465415 EPOPA6NHQ4 379 aa13.94□□□□□ -0.18
CNKSR1-203ENST00000465415 CYP11B2P19099 503 aa13.94□□□□□ -0.18
CNKSR1-203ENST00000465415 GLRA2P23416 452 aa13.94□□□□□ -0.18
CNKSR1-203ENST00000465415 TTC3P53804 2025 aa13.94□□□□□ -0.18
CNKSR1-203ENST00000465415 ERVK-21P61565 698 aa13.94□□□□□ -0.18
CNKSR1-203ENST00000465415 BTG3Q14201 252 aaPredicted RBP13.94□□□□□ -0.18
CNKSR1-203ENST00000465415 FAM102BQ5T8I3 360 aa13.94□□□□□ -0.18
CNKSR1-203ENST00000465415 FIBCD1Q8N539 461 aa13.94□□□□□ -0.18
CNKSR1-203ENST00000465415 SPRYD3Q8NCJ5 442 aa13.94□□□□□ -0.18
CNKSR1-203ENST00000465415 MAFAQ8NHW3 353 aaPredicted RBP13.94□□□□□ -0.18
CNKSR1-203ENST00000465415 ZNF689Q96CS4 500 aaPredicted RBP13.94□□□□□ -0.18
CNKSR1-203ENST00000465415 CDK5RAP3Q96JB5 506 aa13.94□□□□□ -0.18
CNKSR1-203ENST00000465415 SAMD11Q96NU1 681 aa13.94□□□□□ -0.18
CNKSR1-203ENST00000465415 C17orf80Q9BSJ5 609 aa13.94□□□□□ -0.18
CNKSR1-203ENST00000465415 NT5C3AQ9H0P0 336 aa13.94□□□□□ -0.18
CNKSR1-203ENST00000465415 CHST12Q9NRB3 414 aa13.94□□□□□ -0.18
CNKSR1-203ENST00000465415 AGPAT5Q9NUQ2 364 aa13.94□□□□□ -0.18
CNKSR1-203ENST00000465415 TMEM161AQ9NX61 479 aa13.94□□□□□ -0.18
CNKSR1-203ENST00000465415 DACT1Q9NYF0 836 aa13.94□□□□□ -0.18
CNKSR1-203ENST00000465415 DNM3Q9UQ16 869 aa13.94□□□□□ -0.18
CNKSR1-203ENST00000465415 LRRIQ4A6NIV6 560 aa13.93□□□□□ -0.18
CNKSR1-203ENST00000465415 E9PMD0 336 aa13.93□□□□□ -0.18
CNKSR1-203ENST00000465415 RFXAPO00287 272 aa13.93□□□□□ -0.18
CNKSR1-203ENST00000465415 ERLIN2O94905 339 aa13.93□□□□□ -0.18
CNKSR1-203ENST00000465415 EYA4O95677 639 aa13.93□□□□□ -0.18
CNKSR1-203ENST00000465415 PDIA4P13667 645 aaKnown RBP13.93□□□□□ -0.18
CNKSR1-203ENST00000465415 IGFBP4P22692 258 aa13.93□□□□□ -0.18
CNKSR1-203ENST00000465415 LONP1P36776 959 aaKnown RBP13.93□□□□□ -0.18
CNKSR1-203ENST00000465415 PTENP60484 403 aa13.93□□□□□ -0.18
CNKSR1-203ENST00000465415 CEBPZQ03701 1054 aaKnown RBP13.93□□□□□ -0.18
CNKSR1-203ENST00000465415 POU5F1BQ06416 359 aa13.93□□□□□ -0.18
CNKSR1-203ENST00000465415 ADGRE1Q14246 886 aa13.93□□□□□ -0.18
CNKSR1-203ENST00000465415 PAN2Q504Q3 1202 aaKnown RBP13.93□□□□□ -0.18
CNKSR1-203ENST00000465415 HYIQ5T013 277 aa13.93□□□□□ -0.18
CNKSR1-203ENST00000465415 TWF2Q6IBS0 349 aaKnown RBP13.93□□□□□ -0.18
CNKSR1-203ENST00000465415 CABP7Q86V35 215 aa13.93□□□□□ -0.18
CNKSR1-203ENST00000465415 ECHDC2Q86YB7 292 aa13.93□□□□□ -0.18
CNKSR1-203ENST00000465415 CMTR2Q8IYT2 770 aaKnown RBP13.93□□□□□ -0.18
CNKSR1-203ENST00000465415 FBXO22Q8NEZ5 403 aa13.93□□□□□ -0.18
CNKSR1-203ENST00000465415 GDPD5Q8WTR4 605 aa13.93□□□□□ -0.18
CNKSR1-203ENST00000465415 ELAC1Q9H777 363 aaKnown RBP13.93□□□□□ -0.18
CNKSR1-203ENST00000465415 MINDY3Q9H8M7 445 aa13.93□□□□□ -0.18
CNKSR1-203ENST00000465415 A0A0U1RQF3 1178 aa13.92□□□□□ -0.18
CNKSR1-203ENST00000465415 INO80B-WBP1J3KQ70 363 aa13.92□□□□□ -0.18
CNKSR1-203ENST00000465415 SLC26A4O43511 780 aa13.92□□□□□ -0.18
CNKSR1-203ENST00000465415 GTPBP6O43824 516 aaPredicted RBP13.92□□□□□ -0.18
CNKSR1-203ENST00000465415 FGFR1P11362 822 aa13.92□□□□□ -0.18
CNKSR1-203ENST00000465415 CTNNB1P35222 781 aa13.92□□□□□ -0.18
CNKSR1-203ENST00000465415 UBA7P41226 1012 aa13.92□□□□□ -0.18
CNKSR1-203ENST00000465415 GATMP50440 423 aa13.92□□□□□ -0.18
CNKSR1-203ENST00000465415 FAM189BP81408 668 aa13.92□□□□□ -0.18
CNKSR1-203ENST00000465415 GRIN1Q05586 938 aa13.92□□□□□ -0.18
CNKSR1-203ENST00000465415 PTPAQ15257 358 aa13.92□□□□□ -0.18
CNKSR1-203ENST00000465415 PCBP1Q15365 356 aaKnown RBP eCLIP13.92□□□□□ -0.18
CNKSR1-203ENST00000465415 FOXD4L5Q5VV16 416 aaPredicted RBP13.92□□□□□ -0.18
CNKSR1-203ENST00000465415 KCNK18Q7Z418 384 aa13.92□□□□□ -0.18
CNKSR1-203ENST00000465415 IFNLR1Q8IU57 520 aaPredicted RBP13.92□□□□□ -0.18
CNKSR1-203ENST00000465415 KCTD17Q8N5Z5 321 aa13.92□□□□□ -0.18
CNKSR1-203ENST00000465415 RNF169Q8NCN4 708 aa13.92□□□□□ -0.18
CNKSR1-203ENST00000465415 RASSF8Q8NHQ8 419 aa13.92□□□□□ -0.18
CNKSR1-203ENST00000465415 FOXD4L4Q8WXT5 416 aaPredicted RBP13.92□□□□□ -0.18
CNKSR1-203ENST00000465415 CALML4Q96GE6 196 aa13.92□□□□□ -0.18
CNKSR1-203ENST00000465415 PNMA5Q96PV4 448 aa13.92□□□□□ -0.18
CNKSR1-203ENST00000465415 USP28Q96RU2 1077 aa13.92□□□□□ -0.18
CNKSR1-203ENST00000465415 PLIN2Q99541 437 aa13.92□□□□□ -0.18
CNKSR1-203ENST00000465415 NFKBIZQ9BYH8 718 aa13.92□□□□□ -0.18
CNKSR1-203ENST00000465415 COL6A3P12111 3177 aa13.91□□□□□ -0.18
CNKSR1-203ENST00000465415 TBKBP1A7MCY6 615 aa13.91□□□□□ -0.18
CNKSR1-203ENST00000465415 HOXA2O43364 376 aa13.91□□□□□ -0.18
CNKSR1-203ENST00000465415 SSBP05455 408 aaKnown RBP eCLIP13.91□□□□□ -0.18
CNKSR1-203ENST00000465415 ZSCAN22P10073 491 aaPredicted RBP13.91□□□□□ -0.18
CNKSR1-203ENST00000465415 SKIP12755 728 aa13.91□□□□□ -0.18
CNKSR1-203ENST00000465415 MARCKSP29966 332 aaPredicted RBP13.91□□□□□ -0.18
CNKSR1-203ENST00000465415 MBTD1Q05BQ5 628 aa13.91□□□□□ -0.18
CNKSR1-203ENST00000465415 GRB10Q13322 594 aa13.91□□□□□ -0.18
CNKSR1-203ENST00000465415 PPP2R5AQ15172 486 aa13.91□□□□□ -0.18
CNKSR1-203ENST00000465415 TMEM119Q4V9L6 283 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms