RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 FSIP1Q8NA03 581 aa13.18□□□□□ -0.3
APTX-213ENST00000465003 REEP2Q9BRK0 252 aa13.18□□□□□ -0.3
APTX-213ENST00000465003 ZHX3Q9H4I2 956 aa13.18□□□□□ -0.3
APTX-213ENST00000465003 PADI3Q9ULW8 664 aa13.18□□□□□ -0.3
APTX-213ENST00000465003 ADGRA3Q8IWK6 1321 aa13.18□□□□□ -0.3
APTX-213ENST00000465003 MYH11P35749 1972 aa13.17□□□□□ -0.3
APTX-213ENST00000465003 GRXCR1A8MXD5 290 aa13.17□□□□□ -0.3
APTX-213ENST00000465003 ARL2P36404 184 aa13.17□□□□□ -0.3
APTX-213ENST00000465003 PTPRSQ13332 1948 aa13.17□□□□□ -0.3
APTX-213ENST00000465003 E2F4Q16254 413 aa13.17□□□□□ -0.3
APTX-213ENST00000465003 ADALQ6DHV7 355 aa13.17□□□□□ -0.3
APTX-213ENST00000465003 FAM117BQ6P1L5 589 aa13.17□□□□□ -0.3
APTX-213ENST00000465003 NME8Q8N427 588 aa13.17□□□□□ -0.3
APTX-213ENST00000465003 RNPC3Q96LT9 517 aaKnown RBP13.17□□□□□ -0.3
APTX-213ENST00000465003 KCNH3Q9ULD8 1083 aa13.17□□□□□ -0.3
APTX-213ENST00000465003 MGEA5O60502 916 aa13.16□□□□□ -0.3
APTX-213ENST00000465003 CAND2O75155 1236 aa13.16□□□□□ -0.3
APTX-213ENST00000465003 RPS6KA5O75582 802 aa13.16□□□□□ -0.3
APTX-213ENST00000465003 FGBP02675 491 aa13.16□□□□□ -0.3
APTX-213ENST00000465003 CXCL10P02778 98 aa13.16□□□□□ -0.3
APTX-213ENST00000465003 CRYBB1P53674 252 aaPredicted RBP13.16□□□□□ -0.3
APTX-213ENST00000465003 DEFB103AP81534 67 aa13.16□□□□□ -0.3
APTX-213ENST00000465003 PAK2Q13177 524 aa13.16□□□□□ -0.3
APTX-213ENST00000465003 PLEKHG4Q58EX7 1191 aa13.16□□□□□ -0.3
APTX-213ENST00000465003 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.16□□□□□ -0.3
APTX-213ENST00000465003 TSHZ1Q6ZSZ6 1077 aa13.16□□□□□ -0.3
APTX-213ENST00000465003 CDR2LQ86X02 465 aaPredicted RBP13.16□□□□□ -0.3
APTX-213ENST00000465003 MCPH1Q8NEM0 835 aa13.16□□□□□ -0.3
APTX-213ENST00000465003 JPH2Q9BR39 696 aaPredicted RBP13.16□□□□□ -0.3
APTX-213ENST00000465003 PRO3102Q9H379 93 aa13.16□□□□□ -0.3
APTX-213ENST00000465003 TMX1Q9H3N1 280 aa13.16□□□□□ -0.3
APTX-213ENST00000465003 ST3GAL5Q9UNP4 418 aa13.16□□□□□ -0.3
APTX-213ENST00000465003 MICAL3Q7RTP6 2002 aa13.16□□□□□ -0.3
APTX-213ENST00000465003 MYMKA6NI61 221 aa13.16□□□□□ -0.3
APTX-213ENST00000465003 TTLL13PA6NNM8 815 aa13.16□□□□□ -0.3
APTX-213ENST00000465003 EDN1P05305 212 aa13.16□□□□□ -0.3
APTX-213ENST00000465003 KRT18P05783 430 aaKnown RBP13.16□□□□□ -0.3
APTX-213ENST00000465003 DARSP14868 501 aaKnown RBP13.16□□□□□ -0.3
APTX-213ENST00000465003 EIF4BP23588 611 aaKnown RBP13.16□□□□□ -0.3
APTX-213ENST00000465003 AFMP43652 599 aa13.16□□□□□ -0.3
APTX-213ENST00000465003 PEX3P56589 373 aa13.16□□□□□ -0.3
APTX-213ENST00000465003 LONRF3Q496Y0 759 aa13.16□□□□□ -0.3
APTX-213ENST00000465003 CCDC73Q6ZRK6 1079 aa13.16□□□□□ -0.3
APTX-213ENST00000465003 TCP11Q8WWU5 503 aa13.16□□□□□ -0.3
APTX-213ENST00000465003 LINC01599Q8WXQ3 324 aa13.16□□□□□ -0.3
APTX-213ENST00000465003 BLZF1Q9H2G9 400 aa13.16□□□□□ -0.3
APTX-213ENST00000465003 FAM13BQ9NYF5 915 aa13.16□□□□□ -0.3
APTX-213ENST00000465003 SERTAD1Q9UHV2 236 aa13.16□□□□□ -0.3
APTX-213ENST00000465003 INO80B-WBP1J3KQ70 363 aa13.15□□□□□ -0.3
APTX-213ENST00000465003 B4GALT5O43286 388 aa13.15□□□□□ -0.3
APTX-213ENST00000465003 RPUSD2Q8IZ73 545 aaKnown RBP13.15□□□□□ -0.3
APTX-213ENST00000465003 TDHQ8IZJ6 230 aa13.15□□□□□ -0.3
APTX-213ENST00000465003 DDX12PQ92771 950 aa13.15□□□□□ -0.3
APTX-213ENST00000465003 CPB2Q96IY4 423 aa13.15□□□□□ -0.3
APTX-213ENST00000465003 INO80BQ9C086 356 aaPredicted RBP13.15□□□□□ -0.3
APTX-213ENST00000465003 TBC1D7Q9P0N9 293 aa13.15□□□□□ -0.3
APTX-213ENST00000465003 CHD9Q3L8U1 2897 aa13.15□□□□□ -0.3
APTX-213ENST00000465003 CCDC169A6NNP5 214 aa13.14□□□□□ -0.31
APTX-213ENST00000465003 CMA1P23946 247 aa13.14□□□□□ -0.31
APTX-213ENST00000465003 GIT2Q14161 759 aa13.14□□□□□ -0.31
APTX-213ENST00000465003 PSRC1Q6PGN9 363 aaPredicted RBP13.14□□□□□ -0.31
APTX-213ENST00000465003 RTN4RL1Q86UN2 441 aaPredicted RBP13.14□□□□□ -0.31
APTX-213ENST00000465003 MYOCDQ8IZQ8 938 aa13.14□□□□□ -0.31
APTX-213ENST00000465003 MRPS27Q92552 414 aaKnown RBP13.14□□□□□ -0.31
APTX-213ENST00000465003 HPS3Q969F9 1004 aa13.14□□□□□ -0.31
APTX-213ENST00000465003 GCOM2Q9BZD3 368 aaPredicted RBP13.14□□□□□ -0.31
APTX-213ENST00000465003 STK17AQ9UEE5 414 aa13.14□□□□□ -0.31
APTX-213ENST00000465003 HPSEQ9Y251 543 aa13.14□□□□□ -0.31
APTX-213ENST00000465003 PPME1Q9Y570 386 aa13.14□□□□□ -0.31
APTX-213ENST00000465003 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.14□□□□□ -0.31
APTX-213ENST00000465003 GOLGA6L4A6NEF3 574 aa13.14□□□□□ -0.31
APTX-213ENST00000465003 SLC16A4O15374 487 aa13.14□□□□□ -0.31
APTX-213ENST00000465003 GAS2O43903 313 aaKnown RBP13.14□□□□□ -0.31
APTX-213ENST00000465003 UPP2O95045 317 aa13.14□□□□□ -0.31
APTX-213ENST00000465003 IDEP14735 1019 aa13.14□□□□□ -0.31
APTX-213ENST00000465003 RFC2P35250 354 aa13.14□□□□□ -0.31
APTX-213ENST00000465003 NPTX2P47972 431 aa13.14□□□□□ -0.31
APTX-213ENST00000465003 RABGGTBP53611 331 aa13.14□□□□□ -0.31
APTX-213ENST00000465003 WDR5P61964 334 aaKnown RBP13.14□□□□□ -0.31
APTX-213ENST00000465003 MXD4Q14582 209 aaPredicted RBP13.14□□□□□ -0.31
APTX-213ENST00000465003 CNKSR3Q6P9H4 555 aa13.14□□□□□ -0.31
APTX-213ENST00000465003 SV2BQ7L1I2 683 aa13.14□□□□□ -0.31
APTX-213ENST00000465003 SEPT8Q92599 483 aa13.14□□□□□ -0.31
APTX-213ENST00000465003 ERCC4Q92889 916 aaPredicted RBP13.14□□□□□ -0.31
APTX-213ENST00000465003 PKNOX2Q96KN3 472 aa13.14□□□□□ -0.31
APTX-213ENST00000465003 ERVK-5Q9HDB9 667 aa13.14□□□□□ -0.31
APTX-213ENST00000465003 PIN4Q9Y237 131 aaKnown RBP13.14□□□□□ -0.31
APTX-213ENST00000465003 GBF1Q92538 1859 aa13.13□□□□□ -0.31
APTX-213ENST00000465003 ACTN4O43707 911 aaKnown RBP13.13□□□□□ -0.31
APTX-213ENST00000465003 PRPF40AO75400 957 aaKnown RBP13.13□□□□□ -0.31
APTX-213ENST00000465003 MYOGP15173 224 aa13.13□□□□□ -0.31
APTX-213ENST00000465003 GUCY2CP25092 1073 aa13.13□□□□□ -0.31
APTX-213ENST00000465003 DEKP35659 375 aaKnown RBP13.13□□□□□ -0.31
APTX-213ENST00000465003 SYKP43405 635 aa13.13□□□□□ -0.31
APTX-213ENST00000465003 MBTD1Q05BQ5 628 aa13.13□□□□□ -0.31
APTX-213ENST00000465003 IKBKEQ14164 716 aa13.13□□□□□ -0.31
APTX-213ENST00000465003 CATSPER4Q7RTX7 472 aa13.13□□□□□ -0.31
APTX-213ENST00000465003 ZNF410Q86VK4 478 aa13.13□□□□□ -0.31
APTX-213ENST00000465003 EXOC8Q8IYI6 725 aa13.13□□□□□ -0.31
APTX-213ENST00000465003 IQUBQ8NA54 791 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms