RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 ARL2P36404 184 aa18.93■□□□□ 0.62
VPS52-215ENST00000464425 DSC3Q14574 896 aa18.93■□□□□ 0.62
VPS52-215ENST00000464425 ASAP3Q8TDY4 903 aa18.93■□□□□ 0.62
VPS52-215ENST00000464425 ARNTL2Q8WYA1 636 aa18.93■□□□□ 0.62
VPS52-215ENST00000464425 PLIN2Q99541 437 aa18.93■□□□□ 0.62
VPS52-215ENST00000464425 BHMT2Q9H2M3 363 aa18.93■□□□□ 0.62
VPS52-215ENST00000464425 GPRC5CQ9NQ84 441 aa18.93■□□□□ 0.62
VPS52-215ENST00000464425 RGS18Q9NS28 235 aa18.93■□□□□ 0.62
VPS52-215ENST00000464425 MTUS1Q9ULD2 1270 aa18.93■□□□□ 0.62
VPS52-215ENST00000464425 LRFN2Q9ULH4 789 aa18.93■□□□□ 0.62
VPS52-215ENST00000464425 CHD9Q3L8U1 2897 aa18.93■□□□□ 0.62
VPS52-215ENST00000464425 TCHHQ07283 1943 aa18.92■□□□□ 0.62
VPS52-215ENST00000464425 TTC3P53804 2025 aa18.92■□□□□ 0.62
VPS52-215ENST00000464425 LINC01553A4QN01 128 aa18.92■□□□□ 0.62
VPS52-215ENST00000464425 E9PMD0 336 aa18.92■□□□□ 0.62
VPS52-215ENST00000464425 RFXAPO00287 272 aa18.92■□□□□ 0.62
VPS52-215ENST00000464425 ZSCAN20P17040 1043 aaPredicted RBP18.92■□□□□ 0.62
VPS52-215ENST00000464425 NASPP49321 788 aaPredicted RBP18.92■□□□□ 0.62
VPS52-215ENST00000464425 SARSP49591 514 aaKnown RBP18.92■□□□□ 0.62
VPS52-215ENST00000464425 GRIN1Q05586 938 aa18.92■□□□□ 0.62
VPS52-215ENST00000464425 MXD4Q14582 209 aaPredicted RBP18.92■□□□□ 0.62
VPS52-215ENST00000464425 FAM102BQ5T8I3 360 aa18.92■□□□□ 0.62
VPS52-215ENST00000464425 SLC24A5Q71RS6 500 aa18.92■□□□□ 0.62
VPS52-215ENST00000464425 USP28Q96RU2 1077 aa18.92■□□□□ 0.62
VPS52-215ENST00000464425 INO80BQ9C086 356 aaPredicted RBP18.92■□□□□ 0.62
VPS52-215ENST00000464425 POLR3FQ9H1D9 316 aaPredicted RBP18.92■□□□□ 0.62
VPS52-215ENST00000464425 POLD4Q9HCU8 107 aa18.92■□□□□ 0.62
VPS52-215ENST00000464425 C1orf112Q9NSG2 853 aa18.92■□□□□ 0.62
VPS52-215ENST00000464425 CHMP5Q9NZZ3 219 aa18.92■□□□□ 0.62
VPS52-215ENST00000464425 CFAP45Q9UL16 551 aa18.92■□□□□ 0.62
VPS52-215ENST00000464425 DNM3Q9UQ16 869 aa18.92■□□□□ 0.62
VPS52-215ENST00000464425 STXBP5LQ9Y2K9 1186 aa18.92■□□□□ 0.62
VPS52-215ENST00000464425 PCDHB7Q9Y5E2 793 aa18.92■□□□□ 0.62
VPS52-215ENST00000464425 EPOPA6NHQ4 379 aa18.91■□□□□ 0.62
VPS52-215ENST00000464425 C9IYK1 514 aa18.91■□□□□ 0.62
VPS52-215ENST00000464425 STAG3L1P0CL83 205 aa18.91■□□□□ 0.62
VPS52-215ENST00000464425 CYP11B2P19099 503 aa18.91■□□□□ 0.62
VPS52-215ENST00000464425 SFPQP23246 707 aaKnown RBP eCLIP18.91■□□□□ 0.62
VPS52-215ENST00000464425 GLRA2P23416 452 aa18.91■□□□□ 0.62
VPS52-215ENST00000464425 MARCKSP29966 332 aaPredicted RBP18.91■□□□□ 0.62
VPS52-215ENST00000464425 PTPAQ15257 358 aa18.91■□□□□ 0.62
VPS52-215ENST00000464425 CATSPER4Q7RTX7 472 aa18.91■□□□□ 0.62
VPS52-215ENST00000464425 NPAS4Q8IUM7 802 aa18.91■□□□□ 0.62
VPS52-215ENST00000464425 CRIPAKQ8N1N5 446 aa18.91■□□□□ 0.62
VPS52-215ENST00000464425 SP7Q8TDD2 431 aaPredicted RBP18.91■□□□□ 0.62
VPS52-215ENST00000464425 MINDY3Q9H8M7 445 aa18.91■□□□□ 0.62
VPS52-215ENST00000464425 ARID2Q68CP9 1835 aa18.9■□□□□ 0.62
VPS52-215ENST00000464425 DGKIO75912 1065 aa18.9■□□□□ 0.62
VPS52-215ENST00000464425 FOSL2P15408 326 aa18.9■□□□□ 0.62
VPS52-215ENST00000464425 GATMP50440 423 aa18.9■□□□□ 0.62
VPS52-215ENST00000464425 TFDP1Q14186 410 aa18.9■□□□□ 0.62
VPS52-215ENST00000464425 SLC39A14Q15043 492 aa18.9■□□□□ 0.62
VPS52-215ENST00000464425 FAM43BQ6ZT52 329 aaPredicted RBP18.9■□□□□ 0.62
VPS52-215ENST00000464425 KCNK18Q7Z418 384 aa18.9■□□□□ 0.62
VPS52-215ENST00000464425 SRGAP1Q7Z6B7 1085 aa18.9■□□□□ 0.62
VPS52-215ENST00000464425 CABP7Q86V35 215 aa18.9■□□□□ 0.62
VPS52-215ENST00000464425 MCPH1Q8NEM0 835 aa18.9■□□□□ 0.62
VPS52-215ENST00000464425 CDK5RAP3Q96JB5 506 aa18.9■□□□□ 0.62
VPS52-215ENST00000464425 AK8Q96MA6 479 aa18.9■□□□□ 0.62
VPS52-215ENST00000464425 PNMA5Q96PV4 448 aa18.9■□□□□ 0.62
VPS52-215ENST00000464425 TGS1Q96RS0 853 aaKnown RBP18.9■□□□□ 0.62
VPS52-215ENST00000464425 GAS2L1Q99501 681 aaPredicted RBP18.9■□□□□ 0.62
VPS52-215ENST00000464425 CHD7Q9P2D1 2997 aa18.9■□□□□ 0.62
VPS52-215ENST00000464425 YEATS4O95619 227 aa18.89■□□□□ 0.61
VPS52-215ENST00000464425 EYA4O95677 639 aa18.89■□□□□ 0.61
VPS52-215ENST00000464425 IGFBP4P22692 258 aa18.89■□□□□ 0.61
VPS52-215ENST00000464425 UBA7P41226 1012 aa18.89■□□□□ 0.61
VPS52-215ENST00000464425 PHKA2P46019 1235 aa18.89■□□□□ 0.61
VPS52-215ENST00000464425 PTENP60484 403 aa18.89■□□□□ 0.61
VPS52-215ENST00000464425 ERVK-21P61565 698 aa18.89■□□□□ 0.61
VPS52-215ENST00000464425 FAM189BP81408 668 aa18.89■□□□□ 0.61
VPS52-215ENST00000464425 DNM1Q05193 864 aaKnown RBP18.89■□□□□ 0.61
VPS52-215ENST00000464425 GRB10Q13322 594 aa18.89■□□□□ 0.61
VPS52-215ENST00000464425 CAPSQ13938 189 aa18.89■□□□□ 0.61
VPS52-215ENST00000464425 BTG3Q14201 252 aaPredicted RBP18.89■□□□□ 0.61
VPS52-215ENST00000464425 ADGRE1Q14246 886 aa18.89■□□□□ 0.61
VPS52-215ENST00000464425 FOXD4L6Q3SYB3 417 aaPredicted RBP18.89■□□□□ 0.61
VPS52-215ENST00000464425 PAN2Q504Q3 1202 aaKnown RBP18.89■□□□□ 0.61
VPS52-215ENST00000464425 FOXD4L3Q6VB84 417 aaPredicted RBP18.89■□□□□ 0.61
VPS52-215ENST00000464425 FIBCD1Q8N539 461 aa18.89■□□□□ 0.61
VPS52-215ENST00000464425 LINC00301Q8NCQ3 95 aa18.89■□□□□ 0.61
VPS52-215ENST00000464425 C17orf80Q9BSJ5 609 aa18.89■□□□□ 0.61
VPS52-215ENST00000464425 TFIP11Q9UBB9 837 aaKnown RBP18.89■□□□□ 0.61
VPS52-215ENST00000464425 PIN4Q9Y237 131 aaKnown RBP18.89■□□□□ 0.61
VPS52-215ENST00000464425 SSBP05455 408 aaKnown RBP eCLIP18.88■□□□□ 0.61
VPS52-215ENST00000464425 LONP1P36776 959 aaKnown RBP18.88■□□□□ 0.61
VPS52-215ENST00000464425 SPECC1Q5M775 1068 aa18.88■□□□□ 0.61
VPS52-215ENST00000464425 TWF2Q6IBS0 349 aaKnown RBP18.88■□□□□ 0.61
VPS52-215ENST00000464425 RNF169Q8NCN4 708 aa18.88■□□□□ 0.61
VPS52-215ENST00000464425 ZNF689Q96CS4 500 aaPredicted RBP18.88■□□□□ 0.61
VPS52-215ENST00000464425 CLIC6Q96NY7 704 aa18.88■□□□□ 0.61
VPS52-215ENST00000464425 RC3H2Q9HBD1 1191 aaKnown RBP18.88■□□□□ 0.61
VPS52-215ENST00000464425 CHST12Q9NRB3 414 aa18.88■□□□□ 0.61
VPS52-215ENST00000464425 DACT1Q9NYF0 836 aa18.88■□□□□ 0.61
VPS52-215ENST00000464425 ADGRA3Q8IWK6 1321 aa18.88■□□□□ 0.61
VPS52-215ENST00000464425 LRRIQ4A6NIV6 560 aa18.87■□□□□ 0.61
VPS52-215ENST00000464425 INO80B-WBP1J3KQ70 363 aa18.87■□□□□ 0.61
VPS52-215ENST00000464425 PPP6R2O75170 966 aa18.87■□□□□ 0.61
VPS52-215ENST00000464425 FGFR1P11362 822 aa18.87■□□□□ 0.61
VPS52-215ENST00000464425 HYIQ5T013 277 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms