RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 ASAP3Q8TDY4 903 aa20.87■□□□□ 0.93
CCDC78-206ENST00000463539 JPH2Q9BR39 696 aaPredicted RBP20.87■□□□□ 0.93
CCDC78-206ENST00000463539 C16orf70Q9BSU1 422 aa20.87■□□□□ 0.93
CCDC78-206ENST00000463539 RNPEPQ9H4A4 650 aa20.87■□□□□ 0.93
CCDC78-206ENST00000463539 TBX20Q9UMR3 447 aa20.87■□□□□ 0.93
CCDC78-206ENST00000463539 GABRQQ9UN88 632 aa20.87■□□□□ 0.93
CCDC78-206ENST00000463539 EXOC7Q9UPT5 735 aa20.87■□□□□ 0.93
CCDC78-206ENST00000463539 ITIH6Q6UXX5 1313 aa20.87■□□□□ 0.93
CCDC78-206ENST00000463539 TRPA1O75762 1119 aa20.86■□□□□ 0.93
CCDC78-206ENST00000463539 SFPQP23246 707 aaKnown RBP eCLIP20.86■□□□□ 0.93
CCDC78-206ENST00000463539 GLRA2P23416 452 aa20.86■□□□□ 0.93
CCDC78-206ENST00000463539 VEGFBP49765 207 aa20.86■□□□□ 0.93
CCDC78-206ENST00000463539 PRKCZQ05513 592 aa20.86■□□□□ 0.93
CCDC78-206ENST00000463539 TBX2Q13207 712 aaPredicted RBP20.86■□□□□ 0.93
CCDC78-206ENST00000463539 FKBP15Q5T1M5 1219 aa20.86■□□□□ 0.93
CCDC78-206ENST00000463539 CEP135Q66GS9 1140 aa20.86■□□□□ 0.93
CCDC78-206ENST00000463539 MAP4K3Q8IVH8 894 aa20.86■□□□□ 0.93
CCDC78-206ENST00000463539 LRRC8AQ8IWT6 810 aa20.86■□□□□ 0.93
CCDC78-206ENST00000463539 CACTINQ8WUQ7 758 aaKnown RBP20.86■□□□□ 0.93
CCDC78-206ENST00000463539 NDST4Q9H3R1 872 aa20.86■□□□□ 0.93
CCDC78-206ENST00000463539 CGNQ9P2M7 1197 aaKnown RBP20.86■□□□□ 0.93
CCDC78-206ENST00000463539 FAM184BQ9ULE4 1060 aa20.86■□□□□ 0.93
CCDC78-206ENST00000463539 ADGRA3Q8IWK6 1321 aa20.86■□□□□ 0.93
CCDC78-206ENST00000463539 A0A1W2PQC6 194 aa20.85■□□□□ 0.93
CCDC78-206ENST00000463539 H3BRB1 525 aa20.85■□□□□ 0.93
CCDC78-206ENST00000463539 AKAP3O75969 853 aa20.85■□□□□ 0.93
CCDC78-206ENST00000463539 EPB41P11171 864 aaKnown RBP20.85■□□□□ 0.93
CCDC78-206ENST00000463539 SCP2P22307 547 aa20.85■□□□□ 0.93
CCDC78-206ENST00000463539 NAMPTP43490 491 aa20.85■□□□□ 0.93
CCDC78-206ENST00000463539 ZNF484Q5JVG2 852 aa20.85■□□□□ 0.93
CCDC78-206ENST00000463539 MFSD14CQ5VZR4 134 aa20.85■□□□□ 0.93
CCDC78-206ENST00000463539 ARMCX5Q6P1M9 558 aa20.85■□□□□ 0.93
CCDC78-206ENST00000463539 FRMD5Q7Z6J6 570 aa20.85■□□□□ 0.93
CCDC78-206ENST00000463539 TCP11Q8WWU5 503 aa20.85■□□□□ 0.93
CCDC78-206ENST00000463539 LENG1Q96BZ8 264 aaPredicted RBP20.85■□□□□ 0.93
CCDC78-206ENST00000463539 TUT1Q9H6E5 874 aaKnown RBP20.85■□□□□ 0.93
CCDC78-206ENST00000463539 SUGCTQ9HAC7 445 aa20.85■□□□□ 0.93
CCDC78-206ENST00000463539 RNF186Q9NXI6 227 aa20.85■□□□□ 0.93
CCDC78-206ENST00000463539 ARHGAP28Q9P2N2 729 aa20.85■□□□□ 0.93
CCDC78-206ENST00000463539 ARMCX3Q9UH62 379 aaPredicted RBP20.85■□□□□ 0.93
CCDC78-206ENST00000463539 DOCK3Q8IZD9 2030 aa20.85■□□□□ 0.93
CCDC78-206ENST00000463539 IGKV6-21A0A0C4DH24 114 aa20.85■□□□□ 0.93
CCDC78-206ENST00000463539 A6NJR5 290 aa20.85■□□□□ 0.93
CCDC78-206ENST00000463539 ESPNB1AK53 854 aa20.85■□□□□ 0.93
CCDC78-206ENST00000463539 SNRPFP62306 86 aaKnown RBP20.85■□□□□ 0.93
CCDC78-206ENST00000463539 LRMPQ12912 555 aa20.85■□□□□ 0.93
CCDC78-206ENST00000463539 IER5Q5VY09 327 aa20.85■□□□□ 0.93
CCDC78-206ENST00000463539 TRIM59Q8IWR1 403 aa20.85■□□□□ 0.93
CCDC78-206ENST00000463539 TRAPPC12Q8WVT3 735 aa20.85■□□□□ 0.93
CCDC78-206ENST00000463539 MYH11P35749 1972 aa20.84■□□□□ 0.93
CCDC78-206ENST00000463539 LRRIQ4A6NIV6 560 aa20.84■□□□□ 0.93
CCDC78-206ENST00000463539 INSRRP14616 1297 aa20.84■□□□□ 0.93
CCDC78-206ENST00000463539 MSNP26038 577 aaKnown RBP20.84■□□□□ 0.93
CCDC78-206ENST00000463539 CYP2J2P51589 502 aa20.84■□□□□ 0.93
CCDC78-206ENST00000463539 MYBPC2Q14324 1141 aa20.84■□□□□ 0.93
CCDC78-206ENST00000463539 PPFIBP1Q86W92 1011 aa20.84■□□□□ 0.93
CCDC78-206ENST00000463539 SLC9A9Q8IVB4 645 aa20.84■□□□□ 0.93
CCDC78-206ENST00000463539 DEPTORQ8TB45 409 aa20.84■□□□□ 0.93
CCDC78-206ENST00000463539 TRIB2Q92519 343 aa20.84■□□□□ 0.93
CCDC78-206ENST00000463539 METTL14Q9HCE5 456 aaKnown RBP20.84■□□□□ 0.93
CCDC78-206ENST00000463539 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.84■□□□□ 0.93
CCDC78-206ENST00000463539 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.84■□□□□ 0.93
CCDC78-206ENST00000463539 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.84■□□□□ 0.93
CCDC78-206ENST00000463539 AKR1A1P14550 325 aa20.83■□□□□ 0.93
CCDC78-206ENST00000463539 DRP2Q13474 957 aa20.83■□□□□ 0.93
CCDC78-206ENST00000463539 LRRC71Q8N4P6 559 aa20.83■□□□□ 0.93
CCDC78-206ENST00000463539 PRPF31Q8WWY3 499 aaKnown RBP20.83■□□□□ 0.93
CCDC78-206ENST00000463539 PSPC1Q8WXF1 523 aaKnown RBP20.83■□□□□ 0.93
CCDC78-206ENST00000463539 MKNK1Q9BUB5 465 aa20.83■□□□□ 0.93
CCDC78-206ENST00000463539 AP5M1Q9H0R1 490 aa20.83■□□□□ 0.93
CCDC78-206ENST00000463539 DMAC2Q9NW81 257 aa20.83■□□□□ 0.93
CCDC78-206ENST00000463539 FRMD4BQ9Y2L6 1034 aa20.83■□□□□ 0.93
CCDC78-206ENST00000463539 Q9Y3F1 56 aa20.83■□□□□ 0.93
CCDC78-206ENST00000463539 COL1A2P08123 1366 aa20.83■□□□□ 0.92
CCDC78-206ENST00000463539 PSMC2P35998 433 aaKnown RBP20.83■□□□□ 0.92
CCDC78-206ENST00000463539 CASP4P49662 377 aa20.83■□□□□ 0.92
CCDC78-206ENST00000463539 CPT1AP50416 773 aa20.83■□□□□ 0.92
CCDC78-206ENST00000463539 IGBP1P78318 339 aa20.83■□□□□ 0.92
CCDC78-206ENST00000463539 BRDTQ58F21 947 aaPredicted RBP20.83■□□□□ 0.92
CCDC78-206ENST00000463539 C12orf56Q8IXR9 622 aa20.83■□□□□ 0.92
CCDC78-206ENST00000463539 FAM186BQ8IYM0 893 aa20.83■□□□□ 0.92
CCDC78-206ENST00000463539 TMEM174Q8WUU8 243 aa20.83■□□□□ 0.92
CCDC78-206ENST00000463539 TISP43B9A030 160 aa20.82■□□□□ 0.92
CCDC78-206ENST00000463539 EXOC3O60645 756 aa20.82■□□□□ 0.92
CCDC78-206ENST00000463539 C22orf31O95567 290 aa20.82■□□□□ 0.92
CCDC78-206ENST00000463539 TPM1P09493 284 aa20.82■□□□□ 0.92
CCDC78-206ENST00000463539 HTRA3P83110 453 aa20.82■□□□□ 0.92
CCDC78-206ENST00000463539 MKRN4PQ13434 485 aaPredicted RBP20.82■□□□□ 0.92
CCDC78-206ENST00000463539 CAPSQ13938 189 aa20.82■□□□□ 0.92
CCDC78-206ENST00000463539 TRIM14Q14142 442 aa20.82■□□□□ 0.92
CCDC78-206ENST00000463539 MXD4Q14582 209 aaPredicted RBP20.82■□□□□ 0.92
CCDC78-206ENST00000463539 RETREG2Q8NC44 543 aa20.82■□□□□ 0.92
CCDC78-206ENST00000463539 KCNN1Q92952 543 aa20.82■□□□□ 0.92
CCDC78-206ENST00000463539 MGAMO43451 1857 aa20.81■□□□□ 0.92
CCDC78-206ENST00000463539 HNRNPDLO14979 420 aaKnown RBP20.81■□□□□ 0.92
CCDC78-206ENST00000463539 CYBAP13498 195 aa20.81■□□□□ 0.92
CCDC78-206ENST00000463539 CAP1Q01518 475 aa20.81■□□□□ 0.92
CCDC78-206ENST00000463539 PPP2R3AQ06190 1150 aa20.81■□□□□ 0.92
CCDC78-206ENST00000463539 STRN3Q13033 797 aa20.81■□□□□ 0.92
CCDC78-206ENST00000463539 SYCP1Q15431 976 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms