RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 CDH22Q9UJ99 828 aa26.13■■□□□ 1.77
SSNA1-203ENST00000463511 CSDE1O75534 798 aaKnown RBP26.12■■□□□ 1.77
SSNA1-203ENST00000463511 SFNP31947 248 aa26.12■■□□□ 1.77
SSNA1-203ENST00000463511 TEKT3Q9BXF9 490 aa26.12■■□□□ 1.77
SSNA1-203ENST00000463511 A0A0U1RQF3 1178 aa26.11■■□□□ 1.77
SSNA1-203ENST00000463511 JAK3P52333 1124 aa26.11■■□□□ 1.77
SSNA1-203ENST00000463511 AK2P54819 239 aa26.11■■□□□ 1.77
SSNA1-203ENST00000463511 DRP2Q13474 957 aa26.11■■□□□ 1.77
SSNA1-203ENST00000463511 PTPN21Q16825 1174 aa26.11■■□□□ 1.77
SSNA1-203ENST00000463511 ZNF598Q86UK7 904 aaKnown RBP26.11■■□□□ 1.77
SSNA1-203ENST00000463511 SLC39A11Q8N1S5 342 aa26.11■■□□□ 1.77
SSNA1-203ENST00000463511 NCOA5Q9HCD5 579 aaKnown RBP26.11■■□□□ 1.77
SSNA1-203ENST00000463511 SEPT9Q9UHD8 586 aaPredicted RBP26.11■■□□□ 1.77
SSNA1-203ENST00000463511 USP34Q70CQ2 3546 aa26.1■■□□□ 1.77
SSNA1-203ENST00000463511 IFNAR1P17181 557 aa26.1■■□□□ 1.77
SSNA1-203ENST00000463511 HOXB8P17481 243 aaPredicted RBP26.1■■□□□ 1.77
SSNA1-203ENST00000463511 PDIA3P30101 505 aaKnown RBP26.1■■□□□ 1.77
SSNA1-203ENST00000463511 USP11P51784 963 aa26.1■■□□□ 1.77
SSNA1-203ENST00000463511 PTPN5P54829 565 aa26.1■■□□□ 1.77
SSNA1-203ENST00000463511 CCT2P78371 535 aaKnown RBP26.1■■□□□ 1.77
SSNA1-203ENST00000463511 SMC1AQ14683 1233 aaKnown RBP26.1■■□□□ 1.77
SSNA1-203ENST00000463511 ASIC4Q96FT7 647 aa26.1■■□□□ 1.77
SSNA1-203ENST00000463511 TMEM150BA6NC51 233 aa26.09■■□□□ 1.77
SSNA1-203ENST00000463511 EOMESO95936 686 aa26.09■■□□□ 1.77
SSNA1-203ENST00000463511 CA8P35219 290 aa26.09■■□□□ 1.77
SSNA1-203ENST00000463511 TARBP2Q15633 366 aaKnown RBP26.09■■□□□ 1.77
SSNA1-203ENST00000463511 MTERF2Q49AM1 385 aa26.09■■□□□ 1.77
SSNA1-203ENST00000463511 TBCKQ8TEA7 893 aa26.09■■□□□ 1.77
SSNA1-203ENST00000463511 CASP10Q92851 521 aa26.09■■□□□ 1.77
SSNA1-203ENST00000463511 TSHZ2Q9NRE2 1034 aa26.09■■□□□ 1.77
SSNA1-203ENST00000463511 DACT1Q9NYF0 836 aa26.09■■□□□ 1.77
SSNA1-203ENST00000463511 HCFC2Q9Y5Z7 792 aa26.09■■□□□ 1.77
SSNA1-203ENST00000463511 DENND4AQ7Z401 1863 aa26.08■■□□□ 1.77
SSNA1-203ENST00000463511 C2orf71A6NGG8 1288 aa26.08■■□□□ 1.77
SSNA1-203ENST00000463511 NT5C1B-RDH14C9J2C7 533 aa26.08■■□□□ 1.77
SSNA1-203ENST00000463511 PSMD10O75832 226 aa26.08■■□□□ 1.77
SSNA1-203ENST00000463511 VCPP55072 806 aaKnown RBP26.08■■□□□ 1.77
SSNA1-203ENST00000463511 BCAR1P56945 870 aa26.08■■□□□ 1.77
SSNA1-203ENST00000463511 NLRP5P59047 1200 aa26.08■■□□□ 1.77
SSNA1-203ENST00000463511 MIER3Q7Z3K6 550 aa26.08■■□□□ 1.77
SSNA1-203ENST00000463511 ZBTB33Q86T24 672 aa26.08■■□□□ 1.77
SSNA1-203ENST00000463511 MRPL43Q8N983 215 aaKnown RBP26.08■■□□□ 1.77
SSNA1-203ENST00000463511 ZNF274Q96GC6 653 aaPredicted RBP26.08■■□□□ 1.77
SSNA1-203ENST00000463511 SH2D3AQ9BRG2 576 aa26.08■■□□□ 1.77
SSNA1-203ENST00000463511 MRPL9Q9BYD2 267 aaKnown RBP26.08■■□□□ 1.77
SSNA1-203ENST00000463511 ARID2Q68CP9 1835 aa26.07■■□□□ 1.76
SSNA1-203ENST00000463511 TCF15Q12870 199 aa26.07■■□□□ 1.76
SSNA1-203ENST00000463511 RABEP1Q15276 862 aa26.07■■□□□ 1.76
SSNA1-203ENST00000463511 ANKRD1Q15327 319 aa26.07■■□□□ 1.76
SSNA1-203ENST00000463511 TPRNQ4KMQ1 711 aa26.07■■□□□ 1.76
SSNA1-203ENST00000463511 PRRX2Q99811 253 aa26.07■■□□□ 1.76
SSNA1-203ENST00000463511 GCOM2Q9BZD3 368 aaPredicted RBP26.07■■□□□ 1.76
SSNA1-203ENST00000463511 SH3GLB2Q9NR46 395 aa26.07■■□□□ 1.76
SSNA1-203ENST00000463511 TPCN1Q9ULQ1 816 aa26.07■■□□□ 1.76
SSNA1-203ENST00000463511 TDP2O95551 362 aa26.06■■□□□ 1.76
SSNA1-203ENST00000463511 ALDH7A1P49419 539 aaKnown RBP26.06■■□□□ 1.76
SSNA1-203ENST00000463511 RDM1Q8NG50 284 aa26.06■■□□□ 1.76
SSNA1-203ENST00000463511 TMEM169Q96HH4 297 aa26.06■■□□□ 1.76
SSNA1-203ENST00000463511 CEP89Q96ST8 783 aa26.06■■□□□ 1.76
SSNA1-203ENST00000463511 NIFKQ9BYG3 293 aaKnown RBP26.06■■□□□ 1.76
SSNA1-203ENST00000463511 POMKQ9H5K3 350 aa26.06■■□□□ 1.76
SSNA1-203ENST00000463511 NR2E1Q9Y466 385 aa26.06■■□□□ 1.76
SSNA1-203ENST00000463511 A0A087WZ62 844 aa26.05■■□□□ 1.76
SSNA1-203ENST00000463511 CLASP2O75122 1294 aaKnown RBP26.05■■□□□ 1.76
SSNA1-203ENST00000463511 ZC3H11AO75152 810 aaKnown RBP eCLIP26.05■■□□□ 1.76
SSNA1-203ENST00000463511 PHKA2P46019 1235 aa26.05■■□□□ 1.76
SSNA1-203ENST00000463511 LONRF3Q496Y0 759 aa26.05■■□□□ 1.76
SSNA1-203ENST00000463511 Q4G0T1 1027 aa26.05■■□□□ 1.76
SSNA1-203ENST00000463511 XKR3Q5GH77 459 aa26.05■■□□□ 1.76
SSNA1-203ENST00000463511 TWF2Q6IBS0 349 aaKnown RBP26.05■■□□□ 1.76
SSNA1-203ENST00000463511 CES5AQ6NT32 575 aa26.05■■□□□ 1.76
SSNA1-203ENST00000463511 TMEM173Q86WV6 379 aaPredicted RBP26.05■■□□□ 1.76
SSNA1-203ENST00000463511 LPPQ93052 612 aa26.05■■□□□ 1.76
SSNA1-203ENST00000463511 FDXACB1Q9BRP7 624 aaPredicted RBP26.05■■□□□ 1.76
SSNA1-203ENST00000463511 PCDHA4Q9UN74 947 aa26.05■■□□□ 1.76
SSNA1-203ENST00000463511 C2orf16Q68DN1 1984 aa26.05■■□□□ 1.76
SSNA1-203ENST00000463511 STBD1O95210 358 aa26.04■■□□□ 1.76
SSNA1-203ENST00000463511 SFPQP23246 707 aaKnown RBP eCLIP26.04■■□□□ 1.76
SSNA1-203ENST00000463511 VPS52Q8N1B4 723 aa26.04■■□□□ 1.76
SSNA1-203ENST00000463511 AUTS2Q8WXX7 1259 aa26.04■■□□□ 1.76
SSNA1-203ENST00000463511 ADAM7Q9H2U9 754 aa26.04■■□□□ 1.76
SSNA1-203ENST00000463511 CHST12Q9NRB3 414 aa26.04■■□□□ 1.76
SSNA1-203ENST00000463511 PIN4Q9Y237 131 aaKnown RBP26.04■■□□□ 1.76
SSNA1-203ENST00000463511 CACNA1HO95180 2353 aa26.04■■□□□ 1.76
SSNA1-203ENST00000463511 IGKV6-21A0A0C4DH24 114 aa26.03■■□□□ 1.76
SSNA1-203ENST00000463511 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP26.03■■□□□ 1.76
SSNA1-203ENST00000463511 C2CD4DB7Z1M9 353 aa26.03■■□□□ 1.76
SSNA1-203ENST00000463511 CXCL14O95715 111 aa26.03■■□□□ 1.76
SSNA1-203ENST00000463511 PDGFBP01127 241 aaPredicted RBP26.03■■□□□ 1.76
SSNA1-203ENST00000463511 WEE2P0C1S8 567 aa26.03■■□□□ 1.76
SSNA1-203ENST00000463511 DNM2P50570 870 aa26.03■■□□□ 1.76
SSNA1-203ENST00000463511 CDC42EP1Q00587 391 aa26.03■■□□□ 1.76
SSNA1-203ENST00000463511 ITIH3Q06033 890 aa26.03■■□□□ 1.76
SSNA1-203ENST00000463511 B3GNT9Q6UX72 402 aa26.03■■□□□ 1.76
SSNA1-203ENST00000463511 RHPN2Q8IUC4 686 aa26.03■■□□□ 1.76
SSNA1-203ENST00000463511 TRIM22Q8IYM9 498 aa26.03■■□□□ 1.76
SSNA1-203ENST00000463511 KREMEN2Q8NCW0 462 aa26.03■■□□□ 1.76
SSNA1-203ENST00000463511 NECTIN4Q96NY8 510 aa26.03■■□□□ 1.76
SSNA1-203ENST00000463511 ZBP1Q9H171 429 aa26.03■■□□□ 1.76
SSNA1-203ENST00000463511 CYP3A7-CYP3A51PA0A087WV96 503 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms