RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 ADMP35318 185 aa6.64□□□□□ -1.35
VPS36-202ENST00000462289 RGS2P41220 211 aa6.64□□□□□ -1.35
VPS36-202ENST00000462289 TXKP42681 527 aa6.64□□□□□ -1.35
VPS36-202ENST00000462289 GNAQP50148 359 aa6.64□□□□□ -1.35
VPS36-202ENST00000462289 USP11P51784 963 aa6.64□□□□□ -1.35
VPS36-202ENST00000462289 KIF22Q14807 665 aa6.64□□□□□ -1.35
VPS36-202ENST00000462289 NFKBIBQ15653 356 aa6.64□□□□□ -1.35
VPS36-202ENST00000462289 PKN1Q16512 942 aa6.64□□□□□ -1.35
VPS36-202ENST00000462289 CDC37Q16543 378 aaPredicted RBP6.64□□□□□ -1.35
VPS36-202ENST00000462289 SPRED3Q2MJR0 410 aa6.64□□□□□ -1.35
VPS36-202ENST00000462289 MUM1L1Q5H9M0 696 aa6.64□□□□□ -1.35
VPS36-202ENST00000462289 SNRNP48Q6IEG0 339 aaKnown RBP6.64□□□□□ -1.35
VPS36-202ENST00000462289 Q6ZUG5 572 aa6.64□□□□□ -1.35
VPS36-202ENST00000462289 UBE2Q1Q7Z7E8 422 aa6.64□□□□□ -1.35
VPS36-202ENST00000462289 FBXL6Q8N531 539 aa6.64□□□□□ -1.35
VPS36-202ENST00000462289 NPLOC4Q8TAT6 608 aa6.64□□□□□ -1.35
VPS36-202ENST00000462289 CRYGNQ8WXF5 182 aa6.64□□□□□ -1.35
VPS36-202ENST00000462289 BRF1Q92994 677 aa6.64□□□□□ -1.35
VPS36-202ENST00000462289 COA7Q96BR5 231 aa6.64□□□□□ -1.35
VPS36-202ENST00000462289 SHISA4Q96DD7 197 aa6.64□□□□□ -1.35
VPS36-202ENST00000462289 TRIM56Q9BRZ2 755 aaKnown RBP6.64□□□□□ -1.35
VPS36-202ENST00000462289 PAGR1Q9BTK6 254 aa6.64□□□□□ -1.35
VPS36-202ENST00000462289 MYL10Q9BUA6 226 aa6.64□□□□□ -1.35
VPS36-202ENST00000462289 KRTAP9-9Q9BYP9 154 aa6.64□□□□□ -1.35
VPS36-202ENST00000462289 KRTAP9-4Q9BYQ2 154 aa6.64□□□□□ -1.35
VPS36-202ENST00000462289 UPF3BQ9BZI7 483 aaKnown RBP6.64□□□□□ -1.35
VPS36-202ENST00000462289 UBA5Q9GZZ9 404 aa6.64□□□□□ -1.35
VPS36-202ENST00000462289 GSX1Q9H4S2 264 aaPredicted RBP6.64□□□□□ -1.35
VPS36-202ENST00000462289 ZNF576Q9H609 170 aa6.64□□□□□ -1.35
VPS36-202ENST00000462289 ACAD9Q9H845 621 aa6.64□□□□□ -1.35
VPS36-202ENST00000462289 ZFYVE1Q9HBF4 777 aa6.64□□□□□ -1.35
VPS36-202ENST00000462289 RAVER2Q9HCJ3 691 aaKnown RBP6.64□□□□□ -1.35
VPS36-202ENST00000462289 RBM28Q9NW13 759 aaKnown RBP6.64□□□□□ -1.35
VPS36-202ENST00000462289 CYP39A1Q9NYL5 469 aa6.64□□□□□ -1.35
VPS36-202ENST00000462289 FLRT1Q9NZU1 646 aa6.64□□□□□ -1.35
VPS36-202ENST00000462289 TRIM17Q9Y577 477 aa6.64□□□□□ -1.35
VPS36-202ENST00000462289 ACTL7BQ9Y614 415 aa6.64□□□□□ -1.35
VPS36-202ENST00000462289 SLC12A7Q9Y666 1083 aa6.64□□□□□ -1.35
VPS36-202ENST00000462289 PFASO15067 1338 aa6.64□□□□□ -1.35
VPS36-202ENST00000462289 SYNGAP1Q96PV0 1343 aa6.64□□□□□ -1.35
VPS36-202ENST00000462289 SCN10AQ9Y5Y9 1956 aa6.64□□□□□ -1.35
VPS36-202ENST00000462289 KLF18A0A0U1RQI7 1052 aa6.63□□□□□ -1.35
VPS36-202ENST00000462289 ESYT2A0FGR8 921 aa6.63□□□□□ -1.35
VPS36-202ENST00000462289 CCDC69A6NI79 296 aa6.63□□□□□ -1.35
VPS36-202ENST00000462289 H3BRB1 525 aa6.63□□□□□ -1.35
VPS36-202ENST00000462289 hCG_1984214I3L0E3 225 aa6.63□□□□□ -1.35
VPS36-202ENST00000462289 NFIBO00712 420 aa6.63□□□□□ -1.35
VPS36-202ENST00000462289 ZBTB43O43298 467 aa6.63□□□□□ -1.35
VPS36-202ENST00000462289 PFKFB2O60825 505 aa6.63□□□□□ -1.35
VPS36-202ENST00000462289 ABCB11O95342 1321 aa6.63□□□□□ -1.35
VPS36-202ENST00000462289 HMGCRP04035 888 aa6.63□□□□□ -1.35
VPS36-202ENST00000462289 FCER1AP12319 257 aa6.63□□□□□ -1.35
VPS36-202ENST00000462289 CYBAP13498 195 aa6.63□□□□□ -1.35
VPS36-202ENST00000462289 GRK4P32298 578 aa6.63□□□□□ -1.35
VPS36-202ENST00000462289 SERPINB4P48594 390 aa6.63□□□□□ -1.35
VPS36-202ENST00000462289 RGS19P49795 217 aa6.63□□□□□ -1.35
VPS36-202ENST00000462289 APOBRQ0VD83 1088 aa6.63□□□□□ -1.35
VPS36-202ENST00000462289 POU4F3Q15319 338 aa6.63□□□□□ -1.35
VPS36-202ENST00000462289 NPY5RQ15761 445 aa6.63□□□□□ -1.35
VPS36-202ENST00000462289 CCDC96Q2M329 555 aa6.63□□□□□ -1.35
VPS36-202ENST00000462289 NFXL1Q6ZNB6 911 aa6.63□□□□□ -1.35
VPS36-202ENST00000462289 MICU3Q86XE3 530 aa6.63□□□□□ -1.35
VPS36-202ENST00000462289 RPTORQ8N122 1335 aa6.63□□□□□ -1.35
VPS36-202ENST00000462289 ZNF713Q8N859 430 aaPredicted RBP6.63□□□□□ -1.35
VPS36-202ENST00000462289 CTCFLQ8NI51 663 aaPredicted RBP6.63□□□□□ -1.35
VPS36-202ENST00000462289 MAML3Q96JK9 1138 aa6.63□□□□□ -1.35
VPS36-202ENST00000462289 CITED4Q96RK1 184 aa6.63□□□□□ -1.35
VPS36-202ENST00000462289 AMNQ9BXJ7 453 aa6.63□□□□□ -1.35
VPS36-202ENST00000462289 RNF26Q9BY78 433 aaPredicted RBP6.63□□□□□ -1.35
VPS36-202ENST00000462289 C22orf23Q9BZE7 217 aa6.63□□□□□ -1.35
VPS36-202ENST00000462289 TUT1Q9H6E5 874 aaKnown RBP6.63□□□□□ -1.35
VPS36-202ENST00000462289 STK36Q9NRP7 1315 aa6.63□□□□□ -1.35
VPS36-202ENST00000462289 RNF146Q9NTX7 359 aa6.63□□□□□ -1.35
VPS36-202ENST00000462289 CCDC39Q9UFE4 941 aa6.63□□□□□ -1.35
VPS36-202ENST00000462289 TPCN1Q9ULQ1 816 aa6.63□□□□□ -1.35
VPS36-202ENST00000462289 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.62□□□□□ -1.35
VPS36-202ENST00000462289 CCDC196A0A1B0GTZ2 297 aa6.62□□□□□ -1.35
VPS36-202ENST00000462289 RBM47A0AV96 593 aaKnown RBP6.62□□□□□ -1.35
VPS36-202ENST00000462289 MEIS2O14770 477 aa6.62□□□□□ -1.35
VPS36-202ENST00000462289 PRPF3O43395 683 aaKnown RBP6.62□□□□□ -1.35
VPS36-202ENST00000462289 ADCY3O60266 1144 aa6.62□□□□□ -1.35
VPS36-202ENST00000462289 CTDNEP1O95476 244 aa6.62□□□□□ -1.35
VPS36-202ENST00000462289 SNAI1O95863 264 aaPredicted RBP6.62□□□□□ -1.35
VPS36-202ENST00000462289 ZNF865P0CJ78 1059 aaPredicted RBP6.62□□□□□ -1.35
VPS36-202ENST00000462289 RXRAP19793 462 aa6.62□□□□□ -1.35
VPS36-202ENST00000462289 AK2P54819 239 aa6.62□□□□□ -1.35
VPS36-202ENST00000462289 RPS6P62753 249 aaKnown RBP6.62□□□□□ -1.35
VPS36-202ENST00000462289 TRAF1Q13077 416 aa6.62□□□□□ -1.35
VPS36-202ENST00000462289 RABEP1Q15276 862 aa6.62□□□□□ -1.35
VPS36-202ENST00000462289 ANKRD1Q15327 319 aa6.62□□□□□ -1.35
VPS36-202ENST00000462289 CCL14Q16627 93 aa6.62□□□□□ -1.35
VPS36-202ENST00000462289 ME3Q16798 604 aa6.62□□□□□ -1.35
VPS36-202ENST00000462289 PFKFB3Q16875 520 aaPredicted RBP6.62□□□□□ -1.35
VPS36-202ENST00000462289 GLYCTKQ8IVS8 523 aa6.62□□□□□ -1.35
VPS36-202ENST00000462289 TRPV1Q8NER1 839 aa6.62□□□□□ -1.35
VPS36-202ENST00000462289 DNERQ8NFT8 737 aa6.62□□□□□ -1.35
VPS36-202ENST00000462289 ABHD8Q96I13 439 aa6.62□□□□□ -1.35
VPS36-202ENST00000462289 PIGSQ96S52 555 aa6.62□□□□□ -1.35
VPS36-202ENST00000462289 ACSS3Q9H6R3 686 aa6.62□□□□□ -1.35
VPS36-202ENST00000462289 PDRG1Q9NUG6 133 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms