RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 FLRT1Q9NZU1 646 aa6.4□□□□□ -1.38
CLK1-207ENST00000461981 ATXN10Q9UBB4 475 aa6.4□□□□□ -1.38
CLK1-207ENST00000461981 BARX2Q9UMQ3 279 aaPredicted RBP6.4□□□□□ -1.38
CLK1-207ENST00000461981 SPO11Q9Y5K1 396 aa6.4□□□□□ -1.38
CLK1-207ENST00000461981 CARNS1A5YM72 827 aa6.4□□□□□ -1.39
CLK1-207ENST00000461981 TMEM232C9JQI7 657 aa6.4□□□□□ -1.39
CLK1-207ENST00000461981 SLC3A2P08195 630 aaKnown RBP6.4□□□□□ -1.39
CLK1-207ENST00000461981 PDE6AP16499 860 aa6.4□□□□□ -1.39
CLK1-207ENST00000461981 ACLYP53396 1101 aa6.4□□□□□ -1.39
CLK1-207ENST00000461981 XRCC4Q13426 336 aa6.4□□□□□ -1.39
CLK1-207ENST00000461981 PTGISQ16647 500 aa6.4□□□□□ -1.39
CLK1-207ENST00000461981 PABPC1LQ4VXU2 614 aaKnown RBP6.4□□□□□ -1.39
CLK1-207ENST00000461981 TTMPQ5BVD1 217 aa6.4□□□□□ -1.39
CLK1-207ENST00000461981 ANKRD20A2Q5SQ80 823 aa6.4□□□□□ -1.39
CLK1-207ENST00000461981 ANKRD20A1Q5TYW2 823 aa6.4□□□□□ -1.39
CLK1-207ENST00000461981 ANKRD20A3Q5VUR7 823 aa6.4□□□□□ -1.39
CLK1-207ENST00000461981 KANK3Q6NY19 840 aa6.4□□□□□ -1.39
CLK1-207ENST00000461981 WDR93Q6P2C0 686 aa6.4□□□□□ -1.39
CLK1-207ENST00000461981 TBC1D1Q86TI0 1168 aaPredicted RBP6.4□□□□□ -1.39
CLK1-207ENST00000461981 FAM126BQ8IXS8 530 aa6.4□□□□□ -1.39
CLK1-207ENST00000461981 SLC15A3Q8IY34 581 aa6.4□□□□□ -1.39
CLK1-207ENST00000461981 SPICE1Q8N0Z3 855 aa6.4□□□□□ -1.39
CLK1-207ENST00000461981 ARHGAP18Q8N392 663 aa6.4□□□□□ -1.39
CLK1-207ENST00000461981 KLHDC4Q8TBB5 520 aa6.4□□□□□ -1.39
CLK1-207ENST00000461981 DCAF4Q8WV16 495 aa6.4□□□□□ -1.39
CLK1-207ENST00000461981 ABTB1Q969K4 478 aaPredicted RBP6.4□□□□□ -1.39
CLK1-207ENST00000461981 RRP36Q96EU6 259 aaKnown RBP6.4□□□□□ -1.39
CLK1-207ENST00000461981 CYFIP2Q96F07 1278 aa6.4□□□□□ -1.39
CLK1-207ENST00000461981 FGD4Q96M96 766 aa6.4□□□□□ -1.39
CLK1-207ENST00000461981 ASB2Q96Q27 587 aa6.4□□□□□ -1.39
CLK1-207ENST00000461981 DCP1AQ9NPI6 582 aaPredicted RBP6.4□□□□□ -1.39
CLK1-207ENST00000461981 PRKAG3Q9UGI9 489 aa6.4□□□□□ -1.39
CLK1-207ENST00000461981 FBXO9Q9UK97 447 aaPredicted RBP6.4□□□□□ -1.39
CLK1-207ENST00000461981 ATP8A1Q9Y2Q0 1164 aa6.4□□□□□ -1.39
CLK1-207ENST00000461981 CTAGE9A4FU28 777 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 VWA5AO00534 786 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 HNRNPRO43390 633 aaKnown RBP6.39□□□□□ -1.39
CLK1-207ENST00000461981 GPR37L1O60883 481 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 POLR3DP05423 398 aaPredicted RBP6.39□□□□□ -1.39
CLK1-207ENST00000461981 SMARCA1P28370 1054 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 STAT3P40763 770 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 ZAP70P43403 619 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 HDAC4P56524 1084 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 TRIM32Q13049 653 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 SHHQ15465 462 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 TRIM60Q495X7 471 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 TMEM240Q5SV17 173 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 SND1Q7KZF4 910 aaKnown RBP eCLIP6.39□□□□□ -1.39
CLK1-207ENST00000461981 FCHSD1Q86WN1 690 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 TMEM139Q8IV31 216 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 MAPKAPK5Q8IW41 473 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 SLC44A5Q8NCS7 719 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 NOC3LQ8WTT2 800 aaKnown RBP6.39□□□□□ -1.39
CLK1-207ENST00000461981 HVCN1Q96D96 273 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 NEUROD6Q96NK8 337 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 SYT15Q9BQS2 421 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 OXCT2Q9BYC2 517 aaPredicted RBP6.39□□□□□ -1.39
CLK1-207ENST00000461981 SENP6Q9GZR1 1112 aaPredicted RBP6.39□□□□□ -1.39
CLK1-207ENST00000461981 KATNBL1Q9H079 304 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 PANK4Q9NVE7 773 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 DBNLQ9UJU6 430 aaKnown RBP6.39□□□□□ -1.39
CLK1-207ENST00000461981 ZNF214Q9UL59 606 aaPredicted RBP6.39□□□□□ -1.39
CLK1-207ENST00000461981 CTDP1Q9Y5B0 961 aaPredicted RBP6.39□□□□□ -1.39
CLK1-207ENST00000461981 PALM3A6NDB9 673 aaPredicted RBP6.39□□□□□ -1.39
CLK1-207ENST00000461981 GOLGA8KD6RF30 607 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 PDLIM1O00151 329 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 COBLO75128 1261 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 PPP1R37O75864 691 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 MMEP08473 750 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 FGRP09769 529 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 RFC5P40937 340 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 TRPC1P48995 793 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 UBASH3AP57075 661 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 NFRKBQ6P4R8 1299 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 ERICH1Q86X53 443 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 ZBTB8BQ8NAP8 495 aaPredicted RBP6.39□□□□□ -1.39
CLK1-207ENST00000461981 CAGE1Q8TC20 777 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 PRCCQ92733 491 aaPredicted RBP6.39□□□□□ -1.39
CLK1-207ENST00000461981 NAF1Q96HR8 494 aaKnown RBP6.39□□□□□ -1.39
CLK1-207ENST00000461981 GLT1D1Q96MS3 346 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 RPS6KC1Q96S38 1066 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 DBNDD2Q9BQY9 259 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 DCTPP1Q9H773 170 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 SLC38A10Q9HBR0 1119 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 SENP2Q9HC62 589 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 PA2G4Q9UQ80 394 aaKnown RBP6.39□□□□□ -1.39
CLK1-207ENST00000461981 FAM50BQ9Y247 325 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 USH1CQ9Y6N9 552 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 LCTP09848 1927 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 TRIM43BA6NCK2 446 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 RAG1P15918 1043 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 STIP1P31948 543 aaKnown RBP6.39□□□□□ -1.39
CLK1-207ENST00000461981 PCK1P35558 622 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 FLT3P36888 993 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 FAAH2Q6GMR7 532 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 CEP85Q6P2H3 762 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 C6orf89Q6UWU4 347 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 LONP2Q86WA8 852 aa6.39□□□□□ -1.39
CLK1-207ENST00000461981 WDR75Q8IWA0 830 aaKnown RBP6.39□□□□□ -1.39
CLK1-207ENST00000461981 CLASRPQ8N2M8 674 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms