RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 HAUS3Q68CZ6 603 aa25.06■■□□□ 1.6
TRAF4-207ENST00000461195 NACC1Q96RE7 527 aa25.06■■□□□ 1.6
TRAF4-207ENST00000461195 RAB34Q9BZG1 259 aa25.06■■□□□ 1.6
TRAF4-207ENST00000461195 ELAC1Q9H777 363 aaKnown RBP25.06■■□□□ 1.6
TRAF4-207ENST00000461195 ATP6V0A4Q9HBG4 840 aa25.06■■□□□ 1.6
TRAF4-207ENST00000461195 XPNPEP1Q9NQW7 623 aa25.06■■□□□ 1.6
TRAF4-207ENST00000461195 TMEM161AQ9NX61 479 aa25.06■■□□□ 1.6
TRAF4-207ENST00000461195 LRWD1Q9UFC0 647 aa25.06■■□□□ 1.6
TRAF4-207ENST00000461195 PRRC2BQ5JSZ5 2229 aaKnown RBP25.05■■□□□ 1.6
TRAF4-207ENST00000461195 A0A087WWV3 80 aa25.05■■□□□ 1.6
TRAF4-207ENST00000461195 SRGAP2CP0DJJ0 459 aa25.05■■□□□ 1.6
TRAF4-207ENST00000461195 CTNNB1P35222 781 aa25.05■■□□□ 1.6
TRAF4-207ENST00000461195 PRPHP41219 470 aa25.05■■□□□ 1.6
TRAF4-207ENST00000461195 PDIA5Q14554 519 aa25.05■■□□□ 1.6
TRAF4-207ENST00000461195 FERMT3Q86UX7 667 aa25.05■■□□□ 1.6
TRAF4-207ENST00000461195 CLP1Q92989 425 aaKnown RBP25.05■■□□□ 1.6
TRAF4-207ENST00000461195 IFT122Q9HBG6 1241 aa25.05■■□□□ 1.6
TRAF4-207ENST00000461195 DACT1Q9NYF0 836 aa25.05■■□□□ 1.6
TRAF4-207ENST00000461195 DBR1Q9UK59 544 aaKnown RBP25.05■■□□□ 1.6
TRAF4-207ENST00000461195 STK24Q9Y6E0 443 aa25.05■■□□□ 1.6
TRAF4-207ENST00000461195 FNDC1Q4ZHG4 1894 aaPredicted RBP25.04■■□□□ 1.6
TRAF4-207ENST00000461195 MUC3AQ02505 3323 aa25.04■■□□□ 1.6
TRAF4-207ENST00000461195 LINC00271P0C7V0 271 aa25.04■■□□□ 1.6
TRAF4-207ENST00000461195 PDCP20941 246 aa25.04■■□□□ 1.6
TRAF4-207ENST00000461195 MUTP22033 750 aa25.04■■□□□ 1.6
TRAF4-207ENST00000461195 MXD4Q14582 209 aaPredicted RBP25.04■■□□□ 1.6
TRAF4-207ENST00000461195 PAN2Q504Q3 1202 aaKnown RBP25.04■■□□□ 1.6
TRAF4-207ENST00000461195 POTEGQ6S5H5 508 aa25.04■■□□□ 1.6
TRAF4-207ENST00000461195 IGSF22Q8N9C0 903 aa25.04■■□□□ 1.6
TRAF4-207ENST00000461195 CHST12Q9NRB3 414 aa25.04■■□□□ 1.6
TRAF4-207ENST00000461195 H3BNC9 293 aa25.03■■□□□ 1.6
TRAF4-207ENST00000461195 RB1P06400 928 aa25.03■■□□□ 1.6
TRAF4-207ENST00000461195 BMPR1AP36894 532 aa25.03■■□□□ 1.6
TRAF4-207ENST00000461195 CCT6AP40227 531 aaKnown RBP25.03■■□□□ 1.6
TRAF4-207ENST00000461195 GATMP50440 423 aa25.03■■□□□ 1.6
TRAF4-207ENST00000461195 GPM6BQ13491 265 aa25.03■■□□□ 1.6
TRAF4-207ENST00000461195 DTHD1Q6ZMT9 781 aa25.03■■□□□ 1.6
TRAF4-207ENST00000461195 CATSPER4Q7RTX7 472 aa25.03■■□□□ 1.6
TRAF4-207ENST00000461195 SRGAP1Q7Z6B7 1085 aa25.03■■□□□ 1.6
TRAF4-207ENST00000461195 INTS4Q96HW7 963 aaKnown RBP25.03■■□□□ 1.6
TRAF4-207ENST00000461195 MRPL42Q9Y6G3 142 aaKnown RBP25.03■■□□□ 1.6
TRAF4-207ENST00000461195 KIAA1671Q9BY89 1806 aa25.02■■□□□ 1.6
TRAF4-207ENST00000461195 C5orf67F2Z3F1 127 aa25.02■■□□□ 1.6
TRAF4-207ENST00000461195 K7ELQ4 463 aaPredicted RBP25.02■■□□□ 1.6
TRAF4-207ENST00000461195 USO1O60763 962 aaKnown RBP25.02■■□□□ 1.6
TRAF4-207ENST00000461195 FAM102BQ5T8I3 360 aa25.02■■□□□ 1.6
TRAF4-207ENST00000461195 ECHDC2Q86YB7 292 aa25.02■■□□□ 1.6
TRAF4-207ENST00000461195 RNF149Q8NC42 400 aa25.02■■□□□ 1.6
TRAF4-207ENST00000461195 A0A0U1RQF3 1178 aa25.01■■□□□ 1.59
TRAF4-207ENST00000461195 TBKBP1A7MCY6 615 aa25.01■■□□□ 1.59
TRAF4-207ENST00000461195 TNFRSF10AO00220 468 aa25.01■■□□□ 1.59
TRAF4-207ENST00000461195 HOXA2O43364 376 aa25.01■■□□□ 1.59
TRAF4-207ENST00000461195 ARL2P36404 184 aa25.01■■□□□ 1.59
TRAF4-207ENST00000461195 PHKA2P46019 1235 aa25.01■■□□□ 1.59
TRAF4-207ENST00000461195 ATP2C1P98194 919 aaPredicted RBP25.01■■□□□ 1.59
TRAF4-207ENST00000461195 TFDP1Q14186 410 aa25.01■■□□□ 1.59
TRAF4-207ENST00000461195 PTPROQ16827 1216 aa25.01■■□□□ 1.59
TRAF4-207ENST00000461195 BRAPQ7Z569 592 aa25.01■■□□□ 1.59
TRAF4-207ENST00000461195 C11orf84Q9BUA3 381 aaPredicted RBP25.01■■□□□ 1.59
TRAF4-207ENST00000461195 PIN4Q9Y237 131 aaKnown RBP25.01■■□□□ 1.59
TRAF4-207ENST00000461195 VPS37CA5D8V6 355 aaPredicted RBP25■■□□□ 1.59
TRAF4-207ENST00000461195 FGFR1P11362 822 aa25■■□□□ 1.59
TRAF4-207ENST00000461195 IL17AQ16552 155 aa25■■□□□ 1.59
TRAF4-207ENST00000461195 TWF2Q6IBS0 349 aaKnown RBP25■■□□□ 1.59
TRAF4-207ENST00000461195 MCPH1Q8NEM0 835 aa25■■□□□ 1.59
TRAF4-207ENST00000461195 SNX29Q8TEQ0 813 aa25■■□□□ 1.59
TRAF4-207ENST00000461195 ATXN2LQ8WWM7 1075 aaKnown RBP25■■□□□ 1.59
TRAF4-207ENST00000461195 PLVAPQ9BX97 442 aa25■■□□□ 1.59
TRAF4-207ENST00000461195 MINDY3Q9H8M7 445 aa25■■□□□ 1.59
TRAF4-207ENST00000461195 REV3LO60673 3130 aa25■■□□□ 1.59
TRAF4-207ENST00000461195 ARHGEF35A5YM69 484 aa24.99■■□□□ 1.59
TRAF4-207ENST00000461195 EOMESO95936 686 aa24.99■■□□□ 1.59
TRAF4-207ENST00000461195 POU5F1BQ06416 359 aa24.99■■□□□ 1.59
TRAF4-207ENST00000461195 SKIV2LQ15477 1246 aaKnown RBP24.99■■□□□ 1.59
TRAF4-207ENST00000461195 ECM1Q16610 540 aa24.99■■□□□ 1.59
TRAF4-207ENST00000461195 KRT79Q5XKE5 535 aa24.99■■□□□ 1.59
TRAF4-207ENST00000461195 RNF169Q8NCN4 708 aa24.99■■□□□ 1.59
TRAF4-207ENST00000461195 ASAP3Q8TDY4 903 aa24.99■■□□□ 1.59
TRAF4-207ENST00000461195 SNX21Q969T3 373 aa24.99■■□□□ 1.59
TRAF4-207ENST00000461195 MRPL38Q96DV4 380 aaKnown RBP24.99■■□□□ 1.59
TRAF4-207ENST00000461195 TRAIPQ9BWF2 469 aa24.99■■□□□ 1.59
TRAF4-207ENST00000461195 POLR3FQ9H1D9 316 aaPredicted RBP24.99■■□□□ 1.59
TRAF4-207ENST00000461195 AGPAT5Q9NUQ2 364 aa24.99■■□□□ 1.59
TRAF4-207ENST00000461195 THEGQ9P2T0 379 aa24.99■■□□□ 1.59
TRAF4-207ENST00000461195 KIAA1024Q9UPX6 916 aa24.99■■□□□ 1.59
TRAF4-207ENST00000461195 SKIP12755 728 aa24.98■■□□□ 1.59
TRAF4-207ENST00000461195 PTENP60484 403 aa24.98■■□□□ 1.59
TRAF4-207ENST00000461195 CAPSQ13938 189 aa24.98■■□□□ 1.59
TRAF4-207ENST00000461195 PADI6Q6TGC4 694 aa24.98■■□□□ 1.59
TRAF4-207ENST00000461195 ZNF598Q86UK7 904 aaKnown RBP24.98■■□□□ 1.59
TRAF4-207ENST00000461195 ABI1Q8IZP0 508 aa24.98■■□□□ 1.59
TRAF4-207ENST00000461195 TMEM117Q9H0C3 514 aa24.98■■□□□ 1.59
TRAF4-207ENST00000461195 DDX19AQ9NUU7 478 aaKnown RBP24.98■■□□□ 1.59
TRAF4-207ENST00000461195 NCOR1O75376 2440 aa24.98■■□□□ 1.59
TRAF4-207ENST00000461195 PP2D1A8MPX8 630 aa24.97■■□□□ 1.59
TRAF4-207ENST00000461195 GLRA2P23416 452 aa24.97■■□□□ 1.59
TRAF4-207ENST00000461195 PCBP1Q15365 356 aaKnown RBP eCLIP24.97■■□□□ 1.594e-7■■■■■ 32.7
TRAF4-207ENST00000461195 NAALADL2Q58DX5 795 aa24.97■■□□□ 1.59
TRAF4-207ENST00000461195 SPOUT1Q5T280 376 aaKnown RBP24.97■■□□□ 1.59
TRAF4-207ENST00000461195 ARL6IP4Q66PJ3 421 aaKnown RBP24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms