RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 ADAM22Q9P0K1 906 aa16.75■□□□□ 0.27
SSR4-206ENST00000460616 PALM3A6NDB9 673 aaPredicted RBP16.74■□□□□ 0.27
SSR4-206ENST00000460616 KLRF2D3W0D1 207 aa16.74■□□□□ 0.27
SSR4-206ENST00000460616 EVI5O60447 810 aa16.74■□□□□ 0.27
SSR4-206ENST00000460616 COPB2P35606 906 aa16.74■□□□□ 0.27
SSR4-206ENST00000460616 MKRN4PQ13434 485 aaPredicted RBP16.74■□□□□ 0.27
SSR4-206ENST00000460616 PDIA5Q14554 519 aa16.74■□□□□ 0.27
SSR4-206ENST00000460616 RBBP5Q15291 538 aaKnown RBP16.74■□□□□ 0.27
SSR4-206ENST00000460616 TAOK1Q7L7X3 1001 aa16.74■□□□□ 0.27
SSR4-206ENST00000460616 FGFBP2Q9BYJ0 223 aa16.74■□□□□ 0.27
SSR4-206ENST00000460616 CPVLQ9H3G5 476 aa16.74■□□□□ 0.27
SSR4-206ENST00000460616 SEMA4AQ9H3S1 761 aa16.74■□□□□ 0.27
SSR4-206ENST00000460616 MCM9Q9NXL9 1143 aa16.74■□□□□ 0.27
SSR4-206ENST00000460616 SNED1Q8TER0 1413 aa16.74■□□□□ 0.27
SSR4-206ENST00000460616 USP17L3A6NCW0 530 aa16.74■□□□□ 0.27
SSR4-206ENST00000460616 USP17L4A6NCW7 530 aa16.74■□□□□ 0.27
SSR4-206ENST00000460616 FAM187AA6NFU0 413 aa16.74■□□□□ 0.27
SSR4-206ENST00000460616 LINGO3P0C6S8 592 aa16.74■□□□□ 0.27
SSR4-206ENST00000460616 ABL2P42684 1182 aa16.74■□□□□ 0.27
SSR4-206ENST00000460616 TGFB2P61812 414 aa16.74■□□□□ 0.27
SSR4-206ENST00000460616 MECOMQ03112 1051 aa16.74■□□□□ 0.27
SSR4-206ENST00000460616 TAF11Q15544 211 aa16.74■□□□□ 0.27
SSR4-206ENST00000460616 THEMIS2Q5TEJ8 643 aa16.74■□□□□ 0.27
SSR4-206ENST00000460616 USP17L1Q7RTZ2 530 aa16.74■□□□□ 0.27
SSR4-206ENST00000460616 TTLL6Q8N841 843 aa16.74■□□□□ 0.27
SSR4-206ENST00000460616 TBC1D16Q8TBP0 767 aa16.74■□□□□ 0.27
SSR4-206ENST00000460616 EPS8L3Q8TE67 593 aaKnown RBP16.74■□□□□ 0.27
SSR4-206ENST00000460616 NAP1L3Q99457 506 aaPredicted RBP16.74■□□□□ 0.27
SSR4-206ENST00000460616 LZTS2Q9BRK4 669 aa16.74■□□□□ 0.27
SSR4-206ENST00000460616 BMP2KQ9NSY1 1161 aaPredicted RBP16.74■□□□□ 0.27
SSR4-206ENST00000460616 FGFR1OP2Q9NVK5 253 aa16.74■□□□□ 0.27
SSR4-206ENST00000460616 DBR1Q9UK59 544 aaKnown RBP16.74■□□□□ 0.27
SSR4-206ENST00000460616 COL1A1P02452 1464 aaPredicted RBP16.73■□□□□ 0.27
SSR4-206ENST00000460616 MYH1P12882 1939 aa16.73■□□□□ 0.27
SSR4-206ENST00000460616 TCP11X1B4DZS4 312 aa16.73■□□□□ 0.27
SSR4-206ENST00000460616 PRKCIP41743 596 aa16.73■□□□□ 0.27
SSR4-206ENST00000460616 DRG2P55039 364 aaKnown RBP16.73■□□□□ 0.27
SSR4-206ENST00000460616 ZDHHC24Q6UX98 284 aa16.73■□□□□ 0.27
SSR4-206ENST00000460616 RBM46Q8TBY0 533 aaKnown RBP16.73■□□□□ 0.27
SSR4-206ENST00000460616 FAM84BQ96KN1 310 aaPredicted RBP16.73■□□□□ 0.27
SSR4-206ENST00000460616 FHDC1Q9C0D6 1143 aaPredicted RBP16.73■□□□□ 0.27
SSR4-206ENST00000460616 ETAA1Q9NY74 926 aa16.73■□□□□ 0.27
SSR4-206ENST00000460616 ZFATQ9P243 1243 aa16.73■□□□□ 0.27
SSR4-206ENST00000460616 DIS3Q9Y2L1 958 aaKnown RBP16.73■□□□□ 0.27
SSR4-206ENST00000460616 RPTORQ8N122 1335 aa16.73■□□□□ 0.27
SSR4-206ENST00000460616 RASGRF2O14827 1237 aa16.73■□□□□ 0.27
SSR4-206ENST00000460616 KIAA0391O15091 583 aaKnown RBP16.73■□□□□ 0.27
SSR4-206ENST00000460616 USP17L8P0C7I0 530 aa16.73■□□□□ 0.27
SSR4-206ENST00000460616 PECAM1P16284 738 aaPredicted RBP16.73■□□□□ 0.27
SSR4-206ENST00000460616 RWDD2BP57060 319 aa16.73■□□□□ 0.27
SSR4-206ENST00000460616 DHX34Q14147 1143 aaKnown RBP16.73■□□□□ 0.27
SSR4-206ENST00000460616 LRRC14Q15048 493 aa16.73■□□□□ 0.27
SSR4-206ENST00000460616 DPY19L2P1Q6NXN4 242 aa16.73■□□□□ 0.27
SSR4-206ENST00000460616 BTNL9Q6UXG8 535 aa16.73■□□□□ 0.27
SSR4-206ENST00000460616 ASRGL1Q7L266 308 aa16.73■□□□□ 0.27
SSR4-206ENST00000460616 TEX9Q8N6V9 391 aa16.73■□□□□ 0.27
SSR4-206ENST00000460616 NAF1Q96HR8 494 aaKnown RBP16.73■□□□□ 0.27
SSR4-206ENST00000460616 TMEM109Q9BVC6 243 aa16.73■□□□□ 0.27
SSR4-206ENST00000460616 MKNK2Q9HBH9 465 aa16.73■□□□□ 0.27
SSR4-206ENST00000460616 TMEM260Q9NX78 707 aa16.73■□□□□ 0.27
SSR4-206ENST00000460616 PNMA3Q9UL41 463 aa16.73■□□□□ 0.27
SSR4-206ENST00000460616 INTUQ9ULD6 942 aa16.73■□□□□ 0.27
SSR4-206ENST00000460616 STX8Q9UNK0 236 aa16.73■□□□□ 0.27
SSR4-206ENST00000460616 C6orf229H3BNL8 230 aa16.72■□□□□ 0.27
SSR4-206ENST00000460616 CETN3O15182 167 aa16.72■□□□□ 0.27
SSR4-206ENST00000460616 SNUPNO95149 360 aaKnown RBP16.72■□□□□ 0.27
SSR4-206ENST00000460616 ANXA13P27216 316 aa16.72■□□□□ 0.27
SSR4-206ENST00000460616 TMEM119Q4V9L6 283 aa16.72■□□□□ 0.27
SSR4-206ENST00000460616 CCDC38Q502W7 563 aa16.72■□□□□ 0.27
SSR4-206ENST00000460616 JAMLQ86YT9 394 aa16.72■□□□□ 0.27
SSR4-206ENST00000460616 REXO1Q8N1G1 1221 aaKnown RBP16.72■□□□□ 0.27
SSR4-206ENST00000460616 FITM2Q8N6M3 262 aa16.72■□□□□ 0.27
SSR4-206ENST00000460616 U2AF1L4Q8WU68 220 aaKnown RBP16.72■□□□□ 0.27
SSR4-206ENST00000460616 ARHGEF10LQ9HCE6 1279 aa16.72■□□□□ 0.27
SSR4-206ENST00000460616 ERVK-5Q9HDB9 667 aa16.72■□□□□ 0.27
SSR4-206ENST00000460616 GGA1Q9UJY5 639 aa16.72■□□□□ 0.27
SSR4-206ENST00000460616 HDAC9Q9UKV0 1011 aa16.72■□□□□ 0.27
SSR4-206ENST00000460616 PPP1R9AQ9ULJ8 1098 aa16.72■□□□□ 0.27
SSR4-206ENST00000460616 NENFQ9UMX5 172 aa16.72■□□□□ 0.27
SSR4-206ENST00000460616 SLC37A4O43826 429 aa16.72■□□□□ 0.27
SSR4-206ENST00000460616 PON1P27169 355 aa16.72■□□□□ 0.27
SSR4-206ENST00000460616 AUHQ13825 339 aaKnown RBP16.72■□□□□ 0.27
SSR4-206ENST00000460616 ECM1Q16610 540 aa16.72■□□□□ 0.27
SSR4-206ENST00000460616 EXOC3L4Q17RC7 722 aa16.72■□□□□ 0.27
SSR4-206ENST00000460616 DCAF12L1Q5VU92 463 aa16.72■□□□□ 0.27
SSR4-206ENST00000460616 NUGGCQ68CJ6 796 aa16.72■□□□□ 0.27
SSR4-206ENST00000460616 MGARPQ8TDB4 240 aa16.72■□□□□ 0.27
SSR4-206ENST00000460616 KCNV2Q8TDN2 545 aa16.72■□□□□ 0.27
SSR4-206ENST00000460616 ANKRD27Q96NW4 1050 aa16.72■□□□□ 0.27
SSR4-206ENST00000460616 PLCD4Q9BRC7 762 aa16.72■□□□□ 0.27
SSR4-206ENST00000460616 OSBPL1AQ9BXW6 950 aa16.72■□□□□ 0.27
SSR4-206ENST00000460616 KCTD10Q9H3F6 313 aa16.72■□□□□ 0.27
SSR4-206ENST00000460616 RXFP1Q9HBX9 757 aa16.72■□□□□ 0.27
SSR4-206ENST00000460616 OSGEPQ9NPF4 335 aa16.72■□□□□ 0.27
SSR4-206ENST00000460616 EMILIN3Q9NT22 766 aa16.72■□□□□ 0.27
SSR4-206ENST00000460616 PIM2Q9P1W9 311 aa16.72■□□□□ 0.27
SSR4-206ENST00000460616 RASAL2Q9UJF2 1139 aa16.72■□□□□ 0.27
SSR4-206ENST00000460616 TRIM33Q9UPN9 1127 aa16.72■□□□□ 0.27
SSR4-206ENST00000460616 ARL2BPQ9Y2Y0 163 aa16.72■□□□□ 0.27
SSR4-206ENST00000460616 DDX3XO00571 662 aaKnown RBP eCLIP16.71■□□□□ 0.274e-21■■■□□ 17.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms