RNA–Protein interactions for RNA: ENST00000460584.1

LSG1-204, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 668 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-204ENST00000460584 PPP1R16BQ96T49 567 aa12.84□□□□□ -0.35
LSG1-204ENST00000460584 GCOM2Q9BZD3 368 aaPredicted RBP12.84□□□□□ -0.35
LSG1-204ENST00000460584 INO80BQ9C086 356 aaPredicted RBP12.84□□□□□ -0.35
LSG1-204ENST00000460584 WDR81Q562E7 1941 aa12.84□□□□□ -0.35
LSG1-204ENST00000460584 CACNA1HO95180 2353 aa12.84□□□□□ -0.35
LSG1-204ENST00000460584 C5orf42Q9H799 3197 aa12.83□□□□□ -0.36
LSG1-204ENST00000460584 C2orf71A6NGG8 1288 aa12.83□□□□□ -0.36
LSG1-204ENST00000460584 SKIP12755 728 aa12.83□□□□□ -0.36
LSG1-204ENST00000460584 PHKA2P46019 1235 aa12.83□□□□□ -0.36
LSG1-204ENST00000460584 NUBP1P53384 320 aa12.83□□□□□ -0.36
LSG1-204ENST00000460584 POLGP54098 1239 aaPredicted RBP12.83□□□□□ -0.36
LSG1-204ENST00000460584 ITIH3Q06033 890 aa12.83□□□□□ -0.36
LSG1-204ENST00000460584 SSRP1Q08945 709 aaKnown RBP12.83□□□□□ -0.36
LSG1-204ENST00000460584 PPP2R5CQ13362 524 aa12.83□□□□□ -0.36
LSG1-204ENST00000460584 DRP2Q13474 957 aa12.83□□□□□ -0.36
LSG1-204ENST00000460584 SMC1AQ14683 1233 aaKnown RBP12.83□□□□□ -0.36
LSG1-204ENST00000460584 PPP4R3AQ6IN85 833 aa12.83□□□□□ -0.36
LSG1-204ENST00000460584 MIER3Q7Z3K6 550 aa12.83□□□□□ -0.36
LSG1-204ENST00000460584 ALYREFQ86V81 257 aaKnown RBP12.83□□□□□ -0.36
LSG1-204ENST00000460584 BLIDQ8IZY5 108 aa12.83□□□□□ -0.36
LSG1-204ENST00000460584 CASP10Q92851 521 aa12.83□□□□□ -0.36
LSG1-204ENST00000460584 NECTIN4Q96NY8 510 aa12.83□□□□□ -0.36
LSG1-204ENST00000460584 JPH2Q9BR39 696 aaPredicted RBP12.83□□□□□ -0.36
LSG1-204ENST00000460584 ADAM7Q9H2U9 754 aa12.83□□□□□ -0.36
LSG1-204ENST00000460584 NCOA5Q9HCD5 579 aaKnown RBP12.83□□□□□ -0.36
LSG1-204ENST00000460584 KCNMB3Q9NPA1 279 aa12.83□□□□□ -0.36
LSG1-204ENST00000460584 STK39Q9UEW8 545 aa12.83□□□□□ -0.36
LSG1-204ENST00000460584 CSPG5O95196 566 aa12.82□□□□□ -0.36
LSG1-204ENST00000460584 TDP2O95551 362 aa12.82□□□□□ -0.36
LSG1-204ENST00000460584 SFPQP23246 707 aaKnown RBP eCLIP12.82□□□□□ -0.36
LSG1-204ENST00000460584 TECP42680 631 aa12.82□□□□□ -0.36
LSG1-204ENST00000460584 MRE11P49959 708 aa12.82□□□□□ -0.36
LSG1-204ENST00000460584 DNM2P50570 870 aa12.82□□□□□ -0.36
LSG1-204ENST00000460584 RAB27AP51159 221 aa12.82□□□□□ -0.36
LSG1-204ENST00000460584 PSMC5P62195 406 aa12.82□□□□□ -0.36
LSG1-204ENST00000460584 CCT2P78371 535 aaKnown RBP12.82□□□□□ -0.36
LSG1-204ENST00000460584 GIT2Q14161 759 aa12.82□□□□□ -0.36
LSG1-204ENST00000460584 PTPN21Q16825 1174 aa12.82□□□□□ -0.36
LSG1-204ENST00000460584 TPRNQ4KMQ1 711 aa12.82□□□□□ -0.36
LSG1-204ENST00000460584 PLPP4Q5VZY2 271 aa12.82□□□□□ -0.36
LSG1-204ENST00000460584 ANO5Q75V66 913 aa12.82□□□□□ -0.36
LSG1-204ENST00000460584 EXOC8Q8IYI6 725 aa12.82□□□□□ -0.36
LSG1-204ENST00000460584 FBXL6Q8N531 539 aa12.82□□□□□ -0.36
LSG1-204ENST00000460584 NLRP7Q8WX94 980 aa12.82□□□□□ -0.36
LSG1-204ENST00000460584 PBXIP1Q96AQ6 731 aa12.82□□□□□ -0.36
LSG1-204ENST00000460584 FAM20AQ96MK3 541 aa12.82□□□□□ -0.36
LSG1-204ENST00000460584 ENTPD7Q9NQZ7 604 aa12.82□□□□□ -0.36
LSG1-204ENST00000460584 HCFC2Q9Y5Z7 792 aa12.82□□□□□ -0.36
LSG1-204ENST00000460584 TBX3O15119 743 aa12.81□□□□□ -0.36
LSG1-204ENST00000460584 DKC1O60832 514 aaKnown RBP eCLIP12.81□□□□□ -0.36
LSG1-204ENST00000460584 CLASP2O75122 1294 aaKnown RBP12.81□□□□□ -0.36
LSG1-204ENST00000460584 GCFC2P16383 781 aaKnown RBP12.81□□□□□ -0.36
LSG1-204ENST00000460584 ALDH7A1P49419 539 aaKnown RBP12.81□□□□□ -0.36
LSG1-204ENST00000460584 PTPN5P54829 565 aa12.81□□□□□ -0.36
LSG1-204ENST00000460584 BCAR1P56945 870 aa12.81□□□□□ -0.36
LSG1-204ENST00000460584 NONOQ15233 471 aaKnown RBP eCLIP12.81□□□□□ -0.36
LSG1-204ENST00000460584 TRMT1LQ7Z2T5 733 aaKnown RBP12.81□□□□□ -0.36
LSG1-204ENST00000460584 KRT25Q7Z3Z0 450 aa12.81□□□□□ -0.36
LSG1-204ENST00000460584 TMC7Q7Z402 723 aa12.81□□□□□ -0.36
LSG1-204ENST00000460584 MRPL10Q7Z7H8 261 aaKnown RBP12.81□□□□□ -0.36
LSG1-204ENST00000460584 DDX53Q86TM3 631 aaKnown RBP12.81□□□□□ -0.36
LSG1-204ENST00000460584 PRSS33Q8NF86 280 aa12.81□□□□□ -0.36
LSG1-204ENST00000460584 HELQQ8TDG4 1101 aa12.81□□□□□ -0.36
LSG1-204ENST00000460584 RPGRIP1Q96KN7 1286 aa12.81□□□□□ -0.36
LSG1-204ENST00000460584 ZBP1Q9H171 429 aa12.81□□□□□ -0.36
LSG1-204ENST00000460584 IFT122Q9HBG6 1241 aa12.81□□□□□ -0.36
LSG1-204ENST00000460584 VAV3Q9UKW4 847 aa12.81□□□□□ -0.36
LSG1-204ENST00000460584 NR2E1Q9Y466 385 aa12.81□□□□□ -0.36
LSG1-204ENST00000460584 CYP46A1Q9Y6A2 500 aa12.81□□□□□ -0.36
LSG1-204ENST00000460584 TRIOO75962 3097 aa12.8□□□□□ -0.36
LSG1-204ENST00000460584 A0A087WZ62 844 aa12.8□□□□□ -0.36
LSG1-204ENST00000460584 INPPL1O15357 1258 aa12.8□□□□□ -0.36
LSG1-204ENST00000460584 CHMP2AO43633 222 aa12.8□□□□□ -0.36
LSG1-204ENST00000460584 OFD1O75665 1012 aa12.8□□□□□ -0.36
LSG1-204ENST00000460584 PAPLNO95428 1278 aa12.8□□□□□ -0.36
LSG1-204ENST00000460584 GALTP07902 379 aa12.8□□□□□ -0.36
LSG1-204ENST00000460584 CTSAP10619 480 aa12.8□□□□□ -0.36
LSG1-204ENST00000460584 PBX3P40426 434 aa12.8□□□□□ -0.36
LSG1-204ENST00000460584 QARSP47897 775 aaKnown RBP12.8□□□□□ -0.36
LSG1-204ENST00000460584 BMS1Q14692 1282 aaKnown RBP12.8□□□□□ -0.36
LSG1-204ENST00000460584 PCBP1Q15365 356 aaKnown RBP eCLIP12.8□□□□□ -0.36
LSG1-204ENST00000460584 MTERF2Q49AM1 385 aa12.8□□□□□ -0.36
LSG1-204ENST00000460584 CPLX2Q6PUV4 134 aaKnown RBP12.8□□□□□ -0.36
LSG1-204ENST00000460584 C4orf19Q8IY42 314 aa12.8□□□□□ -0.36
LSG1-204ENST00000460584 GJA10Q969M2 543 aa12.8□□□□□ -0.36
LSG1-204ENST00000460584 TMEM169Q96HH4 297 aa12.8□□□□□ -0.36
LSG1-204ENST00000460584 IGSF21Q96ID5 467 aa12.8□□□□□ -0.36
LSG1-204ENST00000460584 FDXACB1Q9BRP7 624 aaPredicted RBP12.8□□□□□ -0.36
LSG1-204ENST00000460584 PHF20Q9BVI0 1012 aa12.8□□□□□ -0.36
LSG1-204ENST00000460584 DHX33Q9H6R0 707 aaKnown RBP12.8□□□□□ -0.36
LSG1-204ENST00000460584 CYP26B1Q9NR63 512 aa12.8□□□□□ -0.36
LSG1-204ENST00000460584 AGPAT5Q9NUQ2 364 aa12.8□□□□□ -0.36
LSG1-204ENST00000460584 FAM105AQ9NUU6 356 aa12.8□□□□□ -0.36
LSG1-204ENST00000460584 DZANK1Q9NVP4 752 aa12.8□□□□□ -0.36
LSG1-204ENST00000460584 SUCLA2Q9P2R7 463 aaPredicted RBP12.8□□□□□ -0.36
LSG1-204ENST00000460584 SEPT9Q9UHD8 586 aaPredicted RBP12.8□□□□□ -0.36
LSG1-204ENST00000460584 DDX25Q9UHL0 483 aaKnown RBP12.8□□□□□ -0.36
LSG1-204ENST00000460584 USTQ9Y2C2 406 aa12.8□□□□□ -0.36
LSG1-204ENST00000460584 STK36Q9NRP7 1315 aa12.8□□□□□ -0.36
LSG1-204ENST00000460584 EML1O00423 815 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms