RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 CARD11Q9BXL7 1154 aa6.33□□□□□ -1.4
VBP1-202ENST00000460509 PITHD1Q9GZP4 211 aaPredicted RBP6.33□□□□□ -1.4
VBP1-202ENST00000460509 POLR3BQ9NW08 1133 aaPredicted RBP6.33□□□□□ -1.4
VBP1-202ENST00000460509 TMPRSS11EQ9UL52 423 aa6.33□□□□□ -1.4
VBP1-202ENST00000460509 KLHL33A6NCF5 533 aa6.32□□□□□ -1.4
VBP1-202ENST00000460509 DBX1A6NMT0 343 aa6.32□□□□□ -1.4
VBP1-202ENST00000460509 SNUPNO95149 360 aaKnown RBP6.32□□□□□ -1.4
VBP1-202ENST00000460509 CELA3BP08861 270 aa6.32□□□□□ -1.4
VBP1-202ENST00000460509 ZNF888P0CJ79 500 aaPredicted RBP6.32□□□□□ -1.4
VBP1-202ENST00000460509 MTHFD2P13995 350 aa6.32□□□□□ -1.4
VBP1-202ENST00000460509 ETV4P43268 484 aa6.32□□□□□ -1.4
VBP1-202ENST00000460509 EIF4HQ15056 248 aaKnown RBP6.32□□□□□ -1.4
VBP1-202ENST00000460509 INAVAQ3KP66 663 aa6.32□□□□□ -1.4
VBP1-202ENST00000460509 FAM26FQ5R3K3 315 aa6.32□□□□□ -1.4
VBP1-202ENST00000460509 FAM124AQ86V42 546 aa6.32□□□□□ -1.4
VBP1-202ENST00000460509 KLHL36Q8N4N3 616 aa6.32□□□□□ -1.4
VBP1-202ENST00000460509 PPM1NQ8N819 430 aa6.32□□□□□ -1.4
VBP1-202ENST00000460509 WDR92Q96MX6 357 aa6.32□□□□□ -1.4
VBP1-202ENST00000460509 KRTAP17-1Q9BYP8 105 aa6.32□□□□□ -1.4
VBP1-202ENST00000460509 KIAA1683Q9H0B3 1180 aa6.32□□□□□ -1.4
VBP1-202ENST00000460509 KLHL42Q9P2K6 505 aa6.32□□□□□ -1.4
VBP1-202ENST00000460509 INVSQ9Y283 1065 aa6.32□□□□□ -1.4
VBP1-202ENST00000460509 PTPN22Q9Y2R2 807 aa6.32□□□□□ -1.4
VBP1-202ENST00000460509 SPEF1Q9Y4P9 236 aa6.32□□□□□ -1.4
VBP1-202ENST00000460509 MROH6A6NGR9 719 aa6.31□□□□□ -1.4
VBP1-202ENST00000460509 DAPK3O43293 454 aa6.31□□□□□ -1.4
VBP1-202ENST00000460509 HNRNPLP14866 589 aaKnown RBP eCLIP6.31□□□□□ -1.4
VBP1-202ENST00000460509 NRG3P56975 720 aa6.31□□□□□ -1.4
VBP1-202ENST00000460509 GJA9P57773 515 aa6.31□□□□□ -1.4
VBP1-202ENST00000460509 MRPS9P82933 396 aaKnown RBP6.31□□□□□ -1.4
VBP1-202ENST00000460509 MGAT5Q09328 741 aa6.31□□□□□ -1.4
VBP1-202ENST00000460509 ADAM15Q13444 863 aa6.31□□□□□ -1.4
VBP1-202ENST00000460509 USP10Q14694 798 aaKnown RBP6.31□□□□□ -1.4
VBP1-202ENST00000460509 PCOLCEQ15113 449 aa6.31□□□□□ -1.4
VBP1-202ENST00000460509 NT5DC1Q5TFE4 455 aa6.31□□□□□ -1.4
VBP1-202ENST00000460509 LMBR1LQ6UX01 489 aa6.31□□□□□ -1.4
VBP1-202ENST00000460509 LARP4Q71RC2 724 aaKnown RBP eCLIP6.31□□□□□ -1.4
VBP1-202ENST00000460509 GAREM2Q75VX8 874 aa6.31□□□□□ -1.4
VBP1-202ENST00000460509 RALYLQ86SE5 291 aaKnown RBP6.31□□□□□ -1.4
VBP1-202ENST00000460509 LYSMD2Q8IV50 215 aa6.31□□□□□ -1.4
VBP1-202ENST00000460509 BCL6BQ8N143 479 aaPredicted RBP6.31□□□□□ -1.4
VBP1-202ENST00000460509 RSAD2Q8WXG1 361 aa6.31□□□□□ -1.4
VBP1-202ENST00000460509 CHMP4CQ96CF2 233 aa6.31□□□□□ -1.4
VBP1-202ENST00000460509 HOOK2Q96ED9 719 aa6.31□□□□□ -1.4
VBP1-202ENST00000460509 ORAI2Q96SN7 254 aa6.31□□□□□ -1.4
VBP1-202ENST00000460509 USP40Q9NVE5 1235 aa6.31□□□□□ -1.4
VBP1-202ENST00000460509 EVLQ9UI08 416 aaPredicted RBP6.31□□□□□ -1.4
VBP1-202ENST00000460509 ZBTB21Q9ULJ3 1066 aa6.31□□□□□ -1.4
VBP1-202ENST00000460509 LUC7L2Q9Y383 392 aaKnown RBP6.31□□□□□ -1.4
VBP1-202ENST00000460509 GPR45Q9Y5Y3 372 aa6.31□□□□□ -1.4
VBP1-202ENST00000460509 CDY2AQ9Y6F7 541 aa6.31□□□□□ -1.4
VBP1-202ENST00000460509 C9orf118A6NHY6 69 aa6.3□□□□□ -1.4
VBP1-202ENST00000460509 PCDHGA12O60330 932 aa6.3□□□□□ -1.4
VBP1-202ENST00000460509 NRP2O60462 931 aa6.3□□□□□ -1.4
VBP1-202ENST00000460509 B4GALT4O60513 344 aa6.3□□□□□ -1.4
VBP1-202ENST00000460509 CT47B1P0C2W7 299 aaPredicted RBP6.3□□□□□ -1.4
VBP1-202ENST00000460509 ZSCAN22P10073 491 aaPredicted RBP6.3□□□□□ -1.4
VBP1-202ENST00000460509 RBP3P10745 1247 aa6.3□□□□□ -1.4
VBP1-202ENST00000460509 BMP7P18075 431 aa6.3□□□□□ -1.4
VBP1-202ENST00000460509 CSF2RBP32927 897 aa6.3□□□□□ -1.4
VBP1-202ENST00000460509 MRE11P49959 708 aa6.3□□□□□ -1.4
VBP1-202ENST00000460509 KIAA2012Q0VF49 1180 aa6.3□□□□□ -1.4
VBP1-202ENST00000460509 ZNF568Q3ZCX4 644 aa6.3□□□□□ -1.4
VBP1-202ENST00000460509 EFCAB2Q5VUJ9 269 aa6.3□□□□□ -1.4
VBP1-202ENST00000460509 KLHDC10Q6PID8 442 aa6.3□□□□□ -1.4
VBP1-202ENST00000460509 REXO1L1PQ8IX06 675 aa6.3□□□□□ -1.4
VBP1-202ENST00000460509 KBTBD2Q8IY47 623 aa6.3□□□□□ -1.4
VBP1-202ENST00000460509 RAVER1Q8IY67 606 aaKnown RBP6.3□□□□□ -1.4
VBP1-202ENST00000460509 SYT8Q8NBV8 401 aa6.3□□□□□ -1.4
VBP1-202ENST00000460509 AJUBAQ96IF1 538 aa6.3□□□□□ -1.4
VBP1-202ENST00000460509 ACE2Q9BYF1 805 aaPredicted RBP6.3□□□□□ -1.4
VBP1-202ENST00000460509 KATNBL1Q9H079 304 aa6.3□□□□□ -1.4
VBP1-202ENST00000460509 IFT122Q9HBG6 1241 aa6.3□□□□□ -1.4
VBP1-202ENST00000460509 METTL14Q9HCE5 456 aaKnown RBP6.3□□□□□ -1.4
VBP1-202ENST00000460509 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.3□□□□□ -1.4
VBP1-202ENST00000460509 IP6K2Q9UHH9 426 aa6.3□□□□□ -1.4
VBP1-202ENST00000460509 TCEAL9Q9UHQ7 104 aa6.3□□□□□ -1.4
VBP1-202ENST00000460509 ADAM29Q9UKF5 820 aa6.3□□□□□ -1.4
VBP1-202ENST00000460509 THRAP3Q9Y2W1 955 aaKnown RBP6.3□□□□□ -1.4
VBP1-202ENST00000460509 PCDHGA9Q9Y5G4 932 aaKnown RBP6.3□□□□□ -1.4
VBP1-202ENST00000460509 PCDHGA8Q9Y5G5 932 aa6.3□□□□□ -1.4
VBP1-202ENST00000460509 PCDHGA7Q9Y5G6 932 aa6.3□□□□□ -1.4
VBP1-202ENST00000460509 PCDHGA6Q9Y5G7 932 aa6.3□□□□□ -1.4
VBP1-202ENST00000460509 PCDHGA3Q9Y5H0 932 aa6.3□□□□□ -1.4
VBP1-202ENST00000460509 PCDHGA2Q9Y5H1 932 aa6.3□□□□□ -1.4
VBP1-202ENST00000460509 TRIM75PA6NK02 468 aa6.29□□□□□ -1.4
VBP1-202ENST00000460509 MAFO75444 373 aaPredicted RBP6.29□□□□□ -1.4
VBP1-202ENST00000460509 GPR15P49685 360 aa6.29□□□□□ -1.4
VBP1-202ENST00000460509 RAB27AP51159 221 aa6.29□□□□□ -1.4
VBP1-202ENST00000460509 SLC5A3P53794 718 aa6.29□□□□□ -1.4
VBP1-202ENST00000460509 CD69Q07108 199 aa6.29□□□□□ -1.4
VBP1-202ENST00000460509 ODF1Q14990 250 aa6.29□□□□□ -1.4
VBP1-202ENST00000460509 MAN2A1Q16706 1144 aa6.29□□□□□ -1.4
VBP1-202ENST00000460509 MUM1Q2TAK8 710 aa6.29□□□□□ -1.4
VBP1-202ENST00000460509 KCNK18Q7Z418 384 aa6.29□□□□□ -1.4
VBP1-202ENST00000460509 GLB1L2Q8IW92 636 aa6.29□□□□□ -1.4
VBP1-202ENST00000460509 JADE3Q92613 823 aa6.29□□□□□ -1.4
VBP1-202ENST00000460509 GCDHQ92947 438 aaPredicted RBP6.29□□□□□ -1.4
VBP1-202ENST00000460509 GFM2Q969S9 779 aaKnown RBP6.29□□□□□ -1.4
VBP1-202ENST00000460509 UIMC1Q96RL1 719 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms