RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 MRPS6P82932 125 aaKnown RBP13.62□□□□□ -0.23
HDAC4-206ENST00000460235 MDM2Q00987 491 aaPredicted RBP13.62□□□□□ -0.23
HDAC4-206ENST00000460235 TLE2Q04725 743 aa13.62□□□□□ -0.23
HDAC4-206ENST00000460235 RAD51AP2Q09MP3 1159 aa13.62□□□□□ -0.23
HDAC4-206ENST00000460235 CUL4BQ13620 913 aa13.62□□□□□ -0.23
HDAC4-206ENST00000460235 CAMK4Q16566 473 aa13.62□□□□□ -0.23
HDAC4-206ENST00000460235 FAM26FQ5R3K3 315 aa13.62□□□□□ -0.23
HDAC4-206ENST00000460235 CAVIN1Q6NZI2 390 aaKnown RBP13.62□□□□□ -0.23
HDAC4-206ENST00000460235 DNAJB3Q8WWF6 145 aa13.62□□□□□ -0.23
HDAC4-206ENST00000460235 DNAJC19Q96DA6 116 aa13.62□□□□□ -0.23
HDAC4-206ENST00000460235 BLZF1Q9H2G9 400 aa13.62□□□□□ -0.23
HDAC4-206ENST00000460235 XPNPEP1Q9NQW7 623 aa13.62□□□□□ -0.23
HDAC4-206ENST00000460235 TMEM39AQ9NV64 488 aa13.62□□□□□ -0.23
HDAC4-206ENST00000460235 PCDHA5Q9Y5H7 936 aa13.62□□□□□ -0.23
HDAC4-206ENST00000460235 WDR81Q562E7 1941 aa13.62□□□□□ -0.23
HDAC4-206ENST00000460235 K7ERI5 159 aa13.61□□□□□ -0.23
HDAC4-206ENST00000460235 CD4P01730 458 aa13.61□□□□□ -0.23
HDAC4-206ENST00000460235 CLTBP09497 229 aa13.61□□□□□ -0.23
HDAC4-206ENST00000460235 SRGAP2CP0DJJ0 459 aa13.61□□□□□ -0.23
HDAC4-206ENST00000460235 SFPQP23246 707 aaKnown RBP eCLIP13.61□□□□□ -0.23
HDAC4-206ENST00000460235 NLRP11P59045 1033 aaKnown RBP13.61□□□□□ -0.23
HDAC4-206ENST00000460235 RBL2Q08999 1139 aa13.61□□□□□ -0.23
HDAC4-206ENST00000460235 COASYQ13057 564 aa13.61□□□□□ -0.23
HDAC4-206ENST00000460235 PNOCQ13519 176 aa13.61□□□□□ -0.23
HDAC4-206ENST00000460235 MAPK6Q16659 721 aa13.61□□□□□ -0.23
HDAC4-206ENST00000460235 TRIM60Q495X7 471 aa13.61□□□□□ -0.23
HDAC4-206ENST00000460235 CT47A1Q5JQC4 288 aaPredicted RBP13.61□□□□□ -0.23
HDAC4-206ENST00000460235 NT5DC1Q5TFE4 455 aa13.61□□□□□ -0.23
HDAC4-206ENST00000460235 LINC01465Q8N7H1 131 aa13.61□□□□□ -0.23
HDAC4-206ENST00000460235 RNF149Q8NC42 400 aa13.61□□□□□ -0.23
HDAC4-206ENST00000460235 SPATA20Q8TB22 786 aa13.61□□□□□ -0.23
HDAC4-206ENST00000460235 DIS3LQ8TF46 1054 aaKnown RBP13.61□□□□□ -0.23
HDAC4-206ENST00000460235 NLRP4Q96MN2 994 aa13.61□□□□□ -0.23
HDAC4-206ENST00000460235 CELF4Q9BZC1 486 aaKnown RBP13.61□□□□□ -0.23
HDAC4-206ENST00000460235 TRPV6Q9H1D0 765 aa13.61□□□□□ -0.23
HDAC4-206ENST00000460235 ST6GALNAC4Q9H4F1 302 aa13.61□□□□□ -0.23
HDAC4-206ENST00000460235 TMEM134Q9H6X4 195 aa13.61□□□□□ -0.23
HDAC4-206ENST00000460235 TMEM206Q9H813 350 aa13.61□□□□□ -0.23
HDAC4-206ENST00000460235 TRMT13Q9NUP7 481 aaKnown RBP13.61□□□□□ -0.23
HDAC4-206ENST00000460235 RNF216Q9NWF9 866 aaPredicted RBP13.61□□□□□ -0.23
HDAC4-206ENST00000460235 TRPV2Q9Y5S1 764 aa13.61□□□□□ -0.23
HDAC4-206ENST00000460235 UBE4BO95155 1302 aa13.61□□□□□ -0.23
HDAC4-206ENST00000460235 RSPH10B2B2RC85 870 aa13.6□□□□□ -0.23
HDAC4-206ENST00000460235 GPR182O15218 404 aa13.6□□□□□ -0.23
HDAC4-206ENST00000460235 EIF3DO15371 548 aaKnown RBP eCLIP13.6□□□□□ -0.23
HDAC4-206ENST00000460235 CAVIN2O95810 425 aa13.6□□□□□ -0.23
HDAC4-206ENST00000460235 RSPH10BP0C881 870 aa13.6□□□□□ -0.23
HDAC4-206ENST00000460235 SELPP16109 830 aa13.6□□□□□ -0.23
HDAC4-206ENST00000460235 GLRA2P23416 452 aa13.6□□□□□ -0.23
HDAC4-206ENST00000460235 RFC2P35250 354 aa13.6□□□□□ -0.23
HDAC4-206ENST00000460235 NPTX2P47972 431 aa13.6□□□□□ -0.23
HDAC4-206ENST00000460235 GPC3P51654 580 aa13.6□□□□□ -0.23
HDAC4-206ENST00000460235 PTENP60484 403 aa13.6□□□□□ -0.23
HDAC4-206ENST00000460235 SNRPFP62306 86 aaKnown RBP13.6□□□□□ -0.23
HDAC4-206ENST00000460235 KMT5BQ4FZB7 885 aa13.6□□□□□ -0.23
HDAC4-206ENST00000460235 FAM26DQ5JW98 314 aa13.6□□□□□ -0.23
HDAC4-206ENST00000460235 ZNF658Q5TYW1 1059 aaPredicted RBP13.6□□□□□ -0.23
HDAC4-206ENST00000460235 UBE2Q1Q7Z7E8 422 aa13.6□□□□□ -0.23
HDAC4-206ENST00000460235 SFR1Q86XK3 245 aa13.6□□□□□ -0.23
HDAC4-206ENST00000460235 IFNLR1Q8IU57 520 aaPredicted RBP13.6□□□□□ -0.23
HDAC4-206ENST00000460235 GRAMD1CQ8IYS0 662 aa13.6□□□□□ -0.23
HDAC4-206ENST00000460235 MLKLQ8NB16 471 aa13.6□□□□□ -0.23
HDAC4-206ENST00000460235 GOLGA5Q8TBA6 731 aa13.6□□□□□ -0.23
HDAC4-206ENST00000460235 LRRC15Q8TF66 581 aa13.6□□□□□ -0.23
HDAC4-206ENST00000460235 KCNN1Q92952 543 aa13.6□□□□□ -0.23
HDAC4-206ENST00000460235 PRIMPOLQ96LW4 560 aa13.6□□□□□ -0.23
HDAC4-206ENST00000460235 NAT10Q9H0A0 1025 aaKnown RBP13.6□□□□□ -0.23
HDAC4-206ENST00000460235 PRMT7Q9NVM4 692 aaPredicted RBP13.6□□□□□ -0.23
HDAC4-206ENST00000460235 ANO10Q9NW15 660 aa13.6□□□□□ -0.23
HDAC4-206ENST00000460235 CGNQ9P2M7 1197 aaKnown RBP13.6□□□□□ -0.23
HDAC4-206ENST00000460235 NR2E3Q9Y5X4 410 aa13.6□□□□□ -0.23
HDAC4-206ENST00000460235 NPHP3-ACAD11A0A0J9YXS1 232 aa13.59□□□□□ -0.23
HDAC4-206ENST00000460235 SFI1A8K8P3 1242 aa13.59□□□□□ -0.23
HDAC4-206ENST00000460235 K7ENM7 598 aa13.59□□□□□ -0.23
HDAC4-206ENST00000460235 ERLIN2O94905 339 aa13.59□□□□□ -0.23
HDAC4-206ENST00000460235 GCNT3O95395 438 aa13.59□□□□□ -0.23
HDAC4-206ENST00000460235 VTNP04004 478 aa13.59□□□□□ -0.23
HDAC4-206ENST00000460235 CCDC192P0DO97 292 aa13.59□□□□□ -0.23
HDAC4-206ENST00000460235 EIF4BP23588 611 aaKnown RBP13.59□□□□□ -0.23
HDAC4-206ENST00000460235 AXLP30530 894 aa13.59□□□□□ -0.23
HDAC4-206ENST00000460235 SARSP49591 514 aaKnown RBP13.59□□□□□ -0.23
HDAC4-206ENST00000460235 ZNF200P98182 395 aaPredicted RBP13.59□□□□□ -0.23
HDAC4-206ENST00000460235 MAPK7Q13164 816 aa13.59□□□□□ -0.23
HDAC4-206ENST00000460235 TMEM132AQ24JP5 1023 aa13.59□□□□□ -0.23
HDAC4-206ENST00000460235 RUFY4Q6ZNE9 571 aa13.59□□□□□ -0.23
HDAC4-206ENST00000460235 ZNF720Q7Z2F6 126 aa13.59□□□□□ -0.23
HDAC4-206ENST00000460235 HAUS6Q7Z4H7 955 aa13.59□□□□□ -0.23
HDAC4-206ENST00000460235 MYOCDQ8IZQ8 938 aa13.59□□□□□ -0.23
HDAC4-206ENST00000460235 SYCP3Q8IZU3 236 aa13.59□□□□□ -0.23
HDAC4-206ENST00000460235 ACCSQ96QU6 501 aa13.59□□□□□ -0.23
HDAC4-206ENST00000460235 HIPK3Q9H422 1215 aa13.59□□□□□ -0.23
HDAC4-206ENST00000460235 GPRC5CQ9NQ84 441 aa13.59□□□□□ -0.23
HDAC4-206ENST00000460235 GINS2Q9Y248 185 aa13.59□□□□□ -0.23
HDAC4-206ENST00000460235 INO80B-WBP1J3KQ70 363 aa13.58□□□□□ -0.24
HDAC4-206ENST00000460235 PSMA7O14818 248 aa13.58□□□□□ -0.24
HDAC4-206ENST00000460235 EVI5O60447 810 aa13.58□□□□□ -0.24
HDAC4-206ENST00000460235 CKBP12277 381 aa13.58□□□□□ -0.24
HDAC4-206ENST00000460235 RAG1P15918 1043 aa13.58□□□□□ -0.24
HDAC4-206ENST00000460235 NCKAP1LP55160 1127 aa13.58□□□□□ -0.24
HDAC4-206ENST00000460235 SOX10P56693 466 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms