RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 C1orf186Q6ZWK4 172 aa14.23□□□□□ -0.13
COL18A1-206ENST00000459895 RPUSD2Q8IZ73 545 aaKnown RBP14.23□□□□□ -0.13
COL18A1-206ENST00000459895 KCTD17Q8N5Z5 321 aa14.23□□□□□ -0.13
COL18A1-206ENST00000459895 HERVK_113Q902F9 699 aa14.23□□□□□ -0.13
COL18A1-206ENST00000459895 SEPT8Q92599 483 aa14.23□□□□□ -0.13
COL18A1-206ENST00000459895 KIFC3Q9BVG8 833 aa14.23□□□□□ -0.13
COL18A1-206ENST00000459895 GOLPH3LQ9H4A5 285 aa14.23□□□□□ -0.13
COL18A1-206ENST00000459895 IFT122Q9HBG6 1241 aa14.23□□□□□ -0.13
COL18A1-206ENST00000459895 POLD4Q9HCU8 107 aa14.23□□□□□ -0.13
COL18A1-206ENST00000459895 CCDC39Q9UFE4 941 aa14.23□□□□□ -0.13
COL18A1-206ENST00000459895 LRRIQ4A6NIV6 560 aa14.22□□□□□ -0.13
COL18A1-206ENST00000459895 RPS6KA5O75582 802 aa14.22□□□□□ -0.13
COL18A1-206ENST00000459895 BAIAP3O94812 1187 aa14.22□□□□□ -0.13
COL18A1-206ENST00000459895 FGBP02675 491 aa14.22□□□□□ -0.13
COL18A1-206ENST00000459895 GUCY2CP25092 1073 aa14.22□□□□□ -0.13
COL18A1-206ENST00000459895 TPRNQ4KMQ1 711 aa14.22□□□□□ -0.13
COL18A1-206ENST00000459895 RRAGBQ5VZM2 374 aa14.22□□□□□ -0.13
COL18A1-206ENST00000459895 CDCA2Q69YH5 1023 aaPredicted RBP14.22□□□□□ -0.13
COL18A1-206ENST00000459895 FAM109BQ6ICB4 259 aaPredicted RBP14.22□□□□□ -0.13
COL18A1-206ENST00000459895 CCDC73Q6ZRK6 1079 aa14.22□□□□□ -0.13
COL18A1-206ENST00000459895 RNF149Q8NC42 400 aa14.22□□□□□ -0.13
COL18A1-206ENST00000459895 APBB2Q92870 758 aa14.22□□□□□ -0.13
COL18A1-206ENST00000459895 DHX58Q96C10 678 aa14.22□□□□□ -0.13
COL18A1-206ENST00000459895 REEP2Q9BRK0 252 aa14.22□□□□□ -0.13
COL18A1-206ENST00000459895 TMX1Q9H3N1 280 aa14.22□□□□□ -0.13
COL18A1-206ENST00000459895 MINDY3Q9H8M7 445 aa14.22□□□□□ -0.13
COL18A1-206ENST00000459895 PADI3Q9ULW8 664 aa14.22□□□□□ -0.13
COL18A1-206ENST00000459895 SQORQ9Y6N5 450 aa14.22□□□□□ -0.13
COL18A1-206ENST00000459895 NLRC5Q86WI3 1866 aa14.21□□□□□ -0.13
COL18A1-206ENST00000459895 A0A1W2PPC1 479 aa14.21□□□□□ -0.13
COL18A1-206ENST00000459895 MGEA5O60502 916 aa14.21□□□□□ -0.13
COL18A1-206ENST00000459895 SRGAP2CP0DJJ0 459 aa14.21□□□□□ -0.13
COL18A1-206ENST00000459895 ACTN1P12814 892 aa14.21□□□□□ -0.13
COL18A1-206ENST00000459895 EIF4BP23588 611 aaKnown RBP14.21□□□□□ -0.13
COL18A1-206ENST00000459895 PHKA2P46019 1235 aa14.21□□□□□ -0.13
COL18A1-206ENST00000459895 MBTD1Q05BQ5 628 aa14.21□□□□□ -0.13
COL18A1-206ENST00000459895 MXD4Q14582 209 aaPredicted RBP14.21□□□□□ -0.13
COL18A1-206ENST00000459895 ARSHQ5FYA8 562 aa14.21□□□□□ -0.13
COL18A1-206ENST00000459895 TMCO2Q7Z6W1 182 aaPredicted RBP14.21□□□□□ -0.13
COL18A1-206ENST00000459895 USP38Q8NB14 1042 aa14.21□□□□□ -0.13
COL18A1-206ENST00000459895 KIFAP3Q92845 792 aa14.21□□□□□ -0.13
COL18A1-206ENST00000459895 PANK2Q9BZ23 570 aa14.21□□□□□ -0.13
COL18A1-206ENST00000459895 FAM13BQ9NYF5 915 aa14.21□□□□□ -0.13
COL18A1-206ENST00000459895 ST3GAL5Q9UNP4 418 aa14.21□□□□□ -0.13
COL18A1-206ENST00000459895 A0A1B0GVL5 298 aa14.2□□□□□ -0.14
COL18A1-206ENST00000459895 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.2□□□□□ -0.14
COL18A1-206ENST00000459895 SFPQP23246 707 aaKnown RBP eCLIP14.2□□□□□ -0.14
COL18A1-206ENST00000459895 NAMPTP43490 491 aa14.2□□□□□ -0.14
COL18A1-206ENST00000459895 NFX1Q12986 1120 aaKnown RBP14.2□□□□□ -0.14
COL18A1-206ENST00000459895 TFDP1Q14186 410 aa14.2□□□□□ -0.14
COL18A1-206ENST00000459895 ADALQ6DHV7 355 aa14.2□□□□□ -0.14
COL18A1-206ENST00000459895 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.2□□□□□ -0.14
COL18A1-206ENST00000459895 ZNF710Q8N1W2 664 aa14.2□□□□□ -0.14
COL18A1-206ENST00000459895 FSIP1Q8NA03 581 aa14.2□□□□□ -0.14
COL18A1-206ENST00000459895 MRPS27Q92552 414 aaKnown RBP14.2□□□□□ -0.14
COL18A1-206ENST00000459895 DRC1Q96MC2 740 aa14.2□□□□□ -0.14
COL18A1-206ENST00000459895 TIPINQ9BVW5 301 aa14.2□□□□□ -0.14
COL18A1-206ENST00000459895 GCOM2Q9BZD3 368 aaPredicted RBP14.2□□□□□ -0.14
COL18A1-206ENST00000459895 MTIF3Q9H2K0 278 aaKnown RBP14.2□□□□□ -0.14
COL18A1-206ENST00000459895 KCND2Q9NZV8 630 aa14.2□□□□□ -0.14
COL18A1-206ENST00000459895 HPSEQ9Y251 543 aa14.2□□□□□ -0.14
COL18A1-206ENST00000459895 TRIOBPQ9H2D6 2365 aa14.2□□□□□ -0.14
COL18A1-206ENST00000459895 RALGAPA2Q2PPJ7 1873 aa14.2□□□□□ -0.14
COL18A1-206ENST00000459895 PHLPP2Q6ZVD8 1323 aa14.19□□□□□ -0.14
COL18A1-206ENST00000459895 FNDC1Q4ZHG4 1894 aaPredicted RBP14.19□□□□□ -0.14
COL18A1-206ENST00000459895 A0A1W2PQ27 194 aa14.19□□□□□ -0.14
COL18A1-206ENST00000459895 A0A1W2PQ64 194 aa14.19□□□□□ -0.14
COL18A1-206ENST00000459895 A0A1W2PQD8 194 aa14.19□□□□□ -0.14
COL18A1-206ENST00000459895 POLR2DO15514 142 aaKnown RBP14.19□□□□□ -0.14
COL18A1-206ENST00000459895 ACTN4O43707 911 aaKnown RBP14.19□□□□□ -0.14
COL18A1-206ENST00000459895 TSPAN1O60635 241 aa14.19□□□□□ -0.14
COL18A1-206ENST00000459895 EDN1P05305 212 aa14.19□□□□□ -0.14
COL18A1-206ENST00000459895 KRT18P05783 430 aaKnown RBP14.19□□□□□ -0.14
COL18A1-206ENST00000459895 KCNJ6P48051 423 aa14.19□□□□□ -0.14
COL18A1-206ENST00000459895 NDUFA8P51970 172 aa14.19□□□□□ -0.14
COL18A1-206ENST00000459895 PTENP60484 403 aa14.19□□□□□ -0.14
COL18A1-206ENST00000459895 IKBKEQ14164 716 aa14.19□□□□□ -0.14
COL18A1-206ENST00000459895 IFNLR1Q8IU57 520 aaPredicted RBP14.19□□□□□ -0.14
COL18A1-206ENST00000459895 STAMQ92783 540 aa14.19□□□□□ -0.14
COL18A1-206ENST00000459895 NFKBIZQ9BYH8 718 aa14.19□□□□□ -0.14
COL18A1-206ENST00000459895 CCDC113Q9H0I3 377 aa14.19□□□□□ -0.14
COL18A1-206ENST00000459895 AGPAT5Q9NUQ2 364 aa14.19□□□□□ -0.14
COL18A1-206ENST00000459895 KCNH3Q9ULD8 1083 aa14.19□□□□□ -0.14
COL18A1-206ENST00000459895 ODF2LQ9ULJ1 636 aa14.19□□□□□ -0.14
COL18A1-206ENST00000459895 PIN4Q9Y237 131 aaKnown RBP14.19□□□□□ -0.14
COL18A1-206ENST00000459895 CHD9Q3L8U1 2897 aa14.18□□□□□ -0.14
COL18A1-206ENST00000459895 FAM237AA0A1B0GTK4 181 aa14.18□□□□□ -0.14
COL18A1-206ENST00000459895 ABHD14A-ACY1A0A1B0GW23 586 aa14.18□□□□□ -0.14
COL18A1-206ENST00000459895 MYMKA6NI61 221 aa14.18□□□□□ -0.14
COL18A1-206ENST00000459895 INO80B-WBP1J3KQ70 363 aa14.18□□□□□ -0.14
COL18A1-206ENST00000459895 SOX1O00570 391 aaPredicted RBP14.18□□□□□ -0.14
COL18A1-206ENST00000459895 ASAP2O43150 1006 aa14.18□□□□□ -0.14
COL18A1-206ENST00000459895 B4GALT5O43286 388 aa14.18□□□□□ -0.14
COL18A1-206ENST00000459895 TBCAO75347 108 aaKnown RBP14.18□□□□□ -0.14
COL18A1-206ENST00000459895 CMA1P23946 247 aa14.18□□□□□ -0.14
COL18A1-206ENST00000459895 NPTX2P47972 431 aa14.18□□□□□ -0.14
COL18A1-206ENST00000459895 ZNF131P52739 623 aa14.18□□□□□ -0.14
COL18A1-206ENST00000459895 PEX3P56589 373 aa14.18□□□□□ -0.14
COL18A1-206ENST00000459895 CDC42EP1Q00587 391 aa14.18□□□□□ -0.14
COL18A1-206ENST00000459895 DMP1Q13316 513 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms