RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 ECM1Q16610 540 aa23.07■■□□□ 1.28
VARS-218ENST00000459667 ARL6IP4Q66PJ3 421 aaKnown RBP23.07■■□□□ 1.28
VARS-218ENST00000459667 RNF149Q8NC42 400 aa23.07■■□□□ 1.28
VARS-218ENST00000459667 KIAA1024Q9UPX6 916 aa23.07■■□□□ 1.28
VARS-218ENST00000459667 ARHGEF35A5YM69 484 aa23.06■■□□□ 1.28
VARS-218ENST00000459667 VWA3AA6NCI4 1184 aa23.06■■□□□ 1.28
VARS-218ENST00000459667 BMP15O95972 392 aa23.06■■□□□ 1.28
VARS-218ENST00000459667 RESTQ13127 1097 aa23.06■■□□□ 1.28
VARS-218ENST00000459667 BTG3Q14201 252 aaPredicted RBP23.06■■□□□ 1.28
VARS-218ENST00000459667 CATSPER4Q7RTX7 472 aa23.06■■□□□ 1.28
VARS-218ENST00000459667 SRGAP1Q7Z6B7 1085 aa23.06■■□□□ 1.28
VARS-218ENST00000459667 GDPD5Q8WTR4 605 aa23.06■■□□□ 1.28
VARS-218ENST00000459667 SAMD11Q96NU1 681 aa23.06■■□□□ 1.28
VARS-218ENST00000459667 DDX19AQ9NUU7 478 aaKnown RBP23.06■■□□□ 1.28
VARS-218ENST00000459667 MTMR6Q9Y217 621 aa23.06■■□□□ 1.28
VARS-218ENST00000459667 RALGAPA2Q2PPJ7 1873 aa23.06■■□□□ 1.28
VARS-218ENST00000459667 CDC25AP30304 524 aa23.05■■□□□ 1.28
VARS-218ENST00000459667 PHKA2P46019 1235 aa23.05■■□□□ 1.28
VARS-218ENST00000459667 GRB10Q13322 594 aa23.05■■□□□ 1.28
VARS-218ENST00000459667 TFDP1Q14186 410 aa23.05■■□□□ 1.28
VARS-218ENST00000459667 PADI6Q6TGC4 694 aa23.05■■□□□ 1.28
VARS-218ENST00000459667 CMTR2Q8IYT2 770 aaKnown RBP23.05■■□□□ 1.28
VARS-218ENST00000459667 MCPH1Q8NEM0 835 aa23.05■■□□□ 1.28
VARS-218ENST00000459667 FBXO22Q8NEZ5 403 aa23.05■■□□□ 1.28
VARS-218ENST00000459667 ASAP3Q8TDY4 903 aa23.05■■□□□ 1.28
VARS-218ENST00000459667 POLR3FQ9H1D9 316 aaPredicted RBP23.05■■□□□ 1.28
VARS-218ENST00000459667 ELAC1Q9H777 363 aaKnown RBP23.05■■□□□ 1.28
VARS-218ENST00000459667 CHST12Q9NRB3 414 aa23.05■■□□□ 1.28
VARS-218ENST00000459667 TMEM161AQ9NX61 479 aa23.05■■□□□ 1.28
VARS-218ENST00000459667 DACT1Q9NYF0 836 aa23.05■■□□□ 1.28
VARS-218ENST00000459667 PIN4Q9Y237 131 aaKnown RBP23.05■■□□□ 1.28
VARS-218ENST00000459667 STX6O43752 255 aa23.04■■□□□ 1.28
VARS-218ENST00000459667 GTPBP6O43824 516 aaPredicted RBP23.04■■□□□ 1.28
VARS-218ENST00000459667 ARL2P36404 184 aa23.04■■□□□ 1.28
VARS-218ENST00000459667 GATMP50440 423 aa23.04■■□□□ 1.28
VARS-218ENST00000459667 FAM189BP81408 668 aa23.04■■□□□ 1.28
VARS-218ENST00000459667 CAPSQ13938 189 aa23.04■■□□□ 1.28
VARS-218ENST00000459667 SF3A1Q15459 793 aaKnown RBP23.04■■□□□ 1.28
VARS-218ENST00000459667 PAN2Q504Q3 1202 aaKnown RBP23.04■■□□□ 1.28
VARS-218ENST00000459667 EPC2Q52LR7 807 aa23.04■■□□□ 1.28
VARS-218ENST00000459667 MAEAQ7L5Y9 396 aa23.04■■□□□ 1.28
VARS-218ENST00000459667 BHMT2Q9H2M3 363 aa23.04■■□□□ 1.28
VARS-218ENST00000459667 MINDY3Q9H8M7 445 aa23.04■■□□□ 1.28
VARS-218ENST00000459667 COL6A3P12111 3177 aa23.03■■□□□ 1.28
VARS-218ENST00000459667 GLRA2P23416 452 aa23.03■■□□□ 1.28
VARS-218ENST00000459667 TMEM192Q8IY95 271 aa23.03■■□□□ 1.28
VARS-218ENST00000459667 MMTAG2Q9BU76 263 aaKnown RBP23.03■■□□□ 1.28
VARS-218ENST00000459667 GPRC5CQ9NQ84 441 aa23.03■■□□□ 1.28
VARS-218ENST00000459667 RWDD3Q9Y3V2 267 aa23.03■■□□□ 1.28
VARS-218ENST00000459667 FNDC1Q4ZHG4 1894 aaPredicted RBP23.02■■□□□ 1.28
VARS-218ENST00000459667 LPXNO60711 386 aa23.02■■□□□ 1.28
VARS-218ENST00000459667 CTNNB1P35222 781 aa23.02■■□□□ 1.28
VARS-218ENST00000459667 PTENP60484 403 aa23.02■■□□□ 1.28
VARS-218ENST00000459667 POU5F1BQ06416 359 aa23.02■■□□□ 1.28
VARS-218ENST00000459667 ZRSR1Q15695 479 aaKnown RBP23.02■■□□□ 1.28
VARS-218ENST00000459667 FAM102BQ5T8I3 360 aa23.02■■□□□ 1.28
VARS-218ENST00000459667 TWF2Q6IBS0 349 aaKnown RBP23.02■■□□□ 1.28
VARS-218ENST00000459667 ECHDC2Q86YB7 292 aa23.02■■□□□ 1.28
VARS-218ENST00000459667 MICALL1Q8N3F8 863 aa23.02■■□□□ 1.28
VARS-218ENST00000459667 PPM1EQ8WY54 764 aa23.02■■□□□ 1.28
VARS-218ENST00000459667 AGPAT5Q9NUQ2 364 aa23.02■■□□□ 1.28
VARS-218ENST00000459667 MTCH2Q9Y6C9 303 aa23.02■■□□□ 1.28
VARS-218ENST00000459667 MRPL42Q9Y6G3 142 aaKnown RBP23.02■■□□□ 1.28
VARS-218ENST00000459667 KIAA1671Q9BY89 1806 aa23.01■■□□□ 1.27
VARS-218ENST00000459667 A0A0U1RQF3 1178 aa23.01■■□□□ 1.27
VARS-218ENST00000459667 TBKBP1A7MCY6 615 aa23.01■■□□□ 1.27
VARS-218ENST00000459667 E9PMD0 336 aa23.01■■□□□ 1.27
VARS-218ENST00000459667 EYA4O95677 639 aa23.01■■□□□ 1.27
VARS-218ENST00000459667 LINC00271P0C7V0 271 aa23.01■■□□□ 1.27
VARS-218ENST00000459667 FGFR1P11362 822 aa23.01■■□□□ 1.27
VARS-218ENST00000459667 CYP11B2P19099 503 aa23.01■■□□□ 1.27
VARS-218ENST00000459667 POU3F3P20264 500 aaPredicted RBP23.01■■□□□ 1.27
VARS-218ENST00000459667 FAM173BQ6P4H8 233 aa23.01■■□□□ 1.27
VARS-218ENST00000459667 IFNLR1Q8IU57 520 aaPredicted RBP23.01■■□□□ 1.27
VARS-218ENST00000459667 RNF169Q8NCN4 708 aa23.01■■□□□ 1.27
VARS-218ENST00000459667 CLP1Q92989 425 aaKnown RBP23.01■■□□□ 1.27
VARS-218ENST00000459667 ZSCAN16Q9H4T2 348 aaPredicted RBP23.01■■□□□ 1.27
VARS-218ENST00000459667 DNM3Q9UQ16 869 aa23.01■■□□□ 1.27
VARS-218ENST00000459667 INO80B-WBP1J3KQ70 363 aa23■■□□□ 1.27
VARS-218ENST00000459667 HOXA2O43364 376 aa23■■□□□ 1.27
VARS-218ENST00000459667 ERLIN2O94905 339 aa23■■□□□ 1.27
VARS-218ENST00000459667 CCDC85BQ15834 202 aaPredicted RBP23■■□□□ 1.27
VARS-218ENST00000459667 HYIQ5T013 277 aa23■■□□□ 1.27
VARS-218ENST00000459667 AK8Q96MA6 479 aa23■■□□□ 1.27
VARS-218ENST00000459667 NT5C3AQ9H0P0 336 aa23■■□□□ 1.27
VARS-218ENST00000459667 CLIC4Q9Y696 253 aa23■■□□□ 1.27
VARS-218ENST00000459667 LRRIQ4A6NIV6 560 aa22.99■■□□□ 1.27
VARS-218ENST00000459667 BMPR1AP36894 532 aa22.99■■□□□ 1.27
VARS-218ENST00000459667 PCBP1Q15365 356 aaKnown RBP eCLIP22.99■■□□□ 1.276e-7■■■■□ 21.8
VARS-218ENST00000459667 KCNK18Q7Z418 384 aa22.99■■□□□ 1.27
VARS-218ENST00000459667 ZNF598Q86UK7 904 aaKnown RBP22.99■■□□□ 1.27
VARS-218ENST00000459667 CDK5RAP3Q96JB5 506 aa22.99■■□□□ 1.27
VARS-218ENST00000459667 PNMA5Q96PV4 448 aa22.99■■□□□ 1.27
VARS-218ENST00000459667 TRAIPQ9BWF2 469 aa22.99■■□□□ 1.27
VARS-218ENST00000459667 NFKBIZQ9BYH8 718 aa22.99■■□□□ 1.27
VARS-218ENST00000459667 TRANK1O15050 2925 aa22.98■■□□□ 1.27
VARS-218ENST00000459667 C5orf67F2Z3F1 127 aa22.98■■□□□ 1.27
VARS-218ENST00000459667 H3BNC9 293 aa22.98■■□□□ 1.27
VARS-218ENST00000459667 EOMESO95936 686 aa22.98■■□□□ 1.27
VARS-218ENST00000459667 SKIP12755 728 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms