RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 USP17L19D6RCP7 530 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 USP17L20D6RJB6 530 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 COPEO14579 308 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 EFCAB14O75071 495 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 USP17L24Q0WX57 530 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 CUL1Q13616 776 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 SEPT2Q15019 361 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 USP17L6PQ6QN14 398 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 PDIK1LQ8N165 341 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 ARHGAP18Q8N392 663 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 TRIML2Q8N7C3 387 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 ZFP42Q96MM3 310 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 POLR3FQ9H1D9 316 aaPredicted RBP17.09■□□□□ 0.33
HDAC7-217ENST00000459625 RUBCNLQ9H714 662 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 MLXIPLQ9NP71 852 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 ABCC12Q96J65 1359 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 LAD1O00515 517 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 MAP2K2P36507 400 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 MEI1Q5TIA1 1274 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 COPRSQ9NQ92 184 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 ZC4H2Q9NQZ6 224 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 ASNSD1Q9NWL6 643 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 PCDHA13Q9Y5I0 950 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 TAF1CQ15572 869 aaPredicted RBP17.09■□□□□ 0.33
HDAC7-217ENST00000459625 SDE2Q6IQ49 451 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 ARMC6Q6NXE6 501 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 LRRC8AQ8IWT6 810 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 HS6ST3Q8IZP7 471 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 FBXO41Q8TF61 875 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 JRKLQ9Y4A0 524 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 TJP3O95049 919 aa17.08■□□□□ 0.33
HDAC7-217ENST00000459625 R3HDM1Q15032 1099 aaKnown RBP17.08■□□□□ 0.33
HDAC7-217ENST00000459625 UBE3CQ15386 1083 aa17.08■□□□□ 0.33
HDAC7-217ENST00000459625 PRAMEF18Q5VWM3 479 aa17.08■□□□□ 0.33
HDAC7-217ENST00000459625 SUSD4Q5VX71 490 aa17.08■□□□□ 0.33
HDAC7-217ENST00000459625 LMBRD2Q68DH5 695 aaPredicted RBP17.08■□□□□ 0.33
HDAC7-217ENST00000459625 SCG3Q8WXD2 468 aaKnown RBP17.08■□□□□ 0.33
HDAC7-217ENST00000459625 C6orf222P0C671 652 aaPredicted RBP17.08■□□□□ 0.33
HDAC7-217ENST00000459625 CSE1LP55060 971 aaKnown RBP17.08■□□□□ 0.33
HDAC7-217ENST00000459625 KIZQ2M2Z5 673 aa17.08■□□□□ 0.33
HDAC7-217ENST00000459625 CENPKQ9BS16 269 aa17.08■□□□□ 0.33
HDAC7-217ENST00000459625 LMBRD1Q9NUN5 540 aa17.08■□□□□ 0.33
HDAC7-217ENST00000459625 GPATCH8Q9UKJ3 1502 aaKnown RBP17.08■□□□□ 0.32
HDAC7-217ENST00000459625 POLE2P56282 527 aa17.08■□□□□ 0.32
HDAC7-217ENST00000459625 PDCLQ13371 301 aa17.08■□□□□ 0.32
HDAC7-217ENST00000459625 FASTKD1Q53R41 847 aaKnown RBP17.08■□□□□ 0.32
HDAC7-217ENST00000459625 RINLQ6ZS11 566 aa17.08■□□□□ 0.32
HDAC7-217ENST00000459625 BRD2P25440 801 aaKnown RBP17.08■□□□□ 0.32
HDAC7-217ENST00000459625 IL6STP40189 918 aaPredicted RBP17.08■□□□□ 0.32
HDAC7-217ENST00000459625 APOA5Q6Q788 366 aa17.08■□□□□ 0.32
HDAC7-217ENST00000459625 ENOX1Q8TC92 643 aaKnown RBP17.08■□□□□ 0.32
HDAC7-217ENST00000459625 C11orf70Q9BRQ4 267 aa17.08■□□□□ 0.32
HDAC7-217ENST00000459625 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.08■□□□□ 0.32
HDAC7-217ENST00000459625 TRIM54Q9BYV2 358 aa17.08■□□□□ 0.32
HDAC7-217ENST00000459625 TMEM161AQ9NX61 479 aa17.08■□□□□ 0.32
HDAC7-217ENST00000459625 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.08■□□□□ 0.32
HDAC7-217ENST00000459625 NRBP1Q9UHY1 535 aa17.08■□□□□ 0.32
HDAC7-217ENST00000459625 LDHAP00338 332 aaKnown RBP17.08■□□□□ 0.32
HDAC7-217ENST00000459625 GCFC2P16383 781 aaKnown RBP17.08■□□□□ 0.32
HDAC7-217ENST00000459625 FKBP3Q00688 224 aaKnown RBP17.08■□□□□ 0.32
HDAC7-217ENST00000459625 LRRC23Q53EV4 343 aaPredicted RBP17.08■□□□□ 0.32
HDAC7-217ENST00000459625 DHTKD1Q96HY7 919 aaPredicted RBP17.08■□□□□ 0.32
HDAC7-217ENST00000459625 THEGQ9P2T0 379 aa17.08■□□□□ 0.32
HDAC7-217ENST00000459625 DIAPH2O60879 1101 aa17.07■□□□□ 0.32
HDAC7-217ENST00000459625 ADD2P35612 726 aa17.07■□□□□ 0.32
HDAC7-217ENST00000459625 STAT3P40763 770 aa17.07■□□□□ 0.32
HDAC7-217ENST00000459625 ADCK5Q3MIX3 580 aa17.07■□□□□ 0.32
HDAC7-217ENST00000459625 RGS9BPQ6ZS82 235 aa17.07■□□□□ 0.32
HDAC7-217ENST00000459625 USP17L10C9JJH3 530 aa17.07■□□□□ 0.32
HDAC7-217ENST00000459625 PJA2O43164 708 aa17.07■□□□□ 0.32
HDAC7-217ENST00000459625 JAK3P52333 1124 aa17.07■□□□□ 0.32
HDAC7-217ENST00000459625 UNC5CLQ8IV45 518 aa17.07■□□□□ 0.32
HDAC7-217ENST00000459625 FAM81BQ96LP2 452 aa17.07■□□□□ 0.32
HDAC7-217ENST00000459625 AIFM3Q96NN9 605 aa17.07■□□□□ 0.32
HDAC7-217ENST00000459625 TMEM260Q9NX78 707 aa17.07■□□□□ 0.32
HDAC7-217ENST00000459625 PCDHB6Q9Y5E3 794 aa17.07■□□□□ 0.32
HDAC7-217ENST00000459625 CARMIL3Q8ND23 1372 aa17.07■□□□□ 0.32
HDAC7-217ENST00000459625 RARBP10826 455 aa17.07■□□□□ 0.32
HDAC7-217ENST00000459625 MB21D1Q8N884 522 aa17.07■□□□□ 0.32
HDAC7-217ENST00000459625 POTEMA6NI47 508 aa17.07■□□□□ 0.32
HDAC7-217ENST00000459625 APOA4P06727 396 aa17.07■□□□□ 0.32
HDAC7-217ENST00000459625 MCF2P10911 925 aa17.07■□□□□ 0.32
HDAC7-217ENST00000459625 CHRNA3P32297 505 aa17.07■□□□□ 0.32
HDAC7-217ENST00000459625 TOGARAM2Q6ZUX3 1019 aa17.07■□□□□ 0.32
HDAC7-217ENST00000459625 COA1Q9GZY4 146 aa17.07■□□□□ 0.32
HDAC7-217ENST00000459625 MTIF3Q9H2K0 278 aaKnown RBP17.07■□□□□ 0.32
HDAC7-217ENST00000459625 CNOT8Q9UFF9 292 aaKnown RBP17.07■□□□□ 0.32
HDAC7-217ENST00000459625 PCDHGB4Q9UN71 923 aa17.07■□□□□ 0.32
HDAC7-217ENST00000459625 ATP10DQ9P241 1426 aa17.07■□□□□ 0.32
HDAC7-217ENST00000459625 TMEM179Q6ZVK1 233 aa17.07■□□□□ 0.32
HDAC7-217ENST00000459625 DBNLQ9UJU6 430 aaKnown RBP17.07■□□□□ 0.32
HDAC7-217ENST00000459625 MEFVO15553 781 aaPredicted RBP17.06■□□□□ 0.32
HDAC7-217ENST00000459625 ZNF746Q6NUN9 644 aaPredicted RBP17.06■□□□□ 0.32
HDAC7-217ENST00000459625 ACAD11Q709F0 780 aa17.06■□□□□ 0.32
HDAC7-217ENST00000459625 AGAP3Q96P47 875 aa17.06■□□□□ 0.32
HDAC7-217ENST00000459625 ZSWIM5Q9P217 1185 aa17.06■□□□□ 0.32
HDAC7-217ENST00000459625 DNAJC12Q9UKB3 198 aa17.06■□□□□ 0.32
HDAC7-217ENST00000459625 E2F8A0AVK6 867 aa17.06■□□□□ 0.32
HDAC7-217ENST00000459625 IKBKBO14920 756 aa17.06■□□□□ 0.32
HDAC7-217ENST00000459625 SERPING1P05155 500 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms