RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 LRRC31Q6UY01 552 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 CTAGE3PQ8IX95 158 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 ARRDC4Q8NCT1 418 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 SCFD2Q8WU76 684 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 DDX50Q9BQ39 737 aaKnown RBP11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 JPH1Q9HDC5 661 aaPredicted RBP11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 PRPSAP2O60256 369 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 ZNF189O75820 626 aaPredicted RBP11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 CSPG5O95196 566 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 KRT15P19012 456 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 DDIT3P35638 169 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 SNAP25P60880 206 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 IFT88Q13099 833 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 RFX6Q8HWS3 928 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 RABGGTAQ92696 567 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 PCIF1Q9H4Z3 704 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 HOMER3Q9NSC5 361 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 BARHL2Q9NY43 387 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 FLT1P17948 1338 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 TBC1D8O95759 1140 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 SKIP12755 728 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 AKR1B1P15121 316 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 CC2D1AQ6P1N0 951 aaPredicted RBP11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 TOGARAM2Q6ZUX3 1019 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 COL23A1Q86Y22 540 aaPredicted RBP11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 ADGRF4Q8IZF3 695 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 SLC26A4O43511 780 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 TFRCP02786 760 aaKnown RBP11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 CYP2B6P20813 491 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 GPC3P51654 580 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 STAT5BP51692 787 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 SESN3P58005 492 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 PHEXP78562 749 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 SWSAP1Q6NVH7 229 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 CDC42EP5Q6NZY7 148 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 INTS5Q6P9B9 1019 aaKnown RBP11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 FBXO33Q7Z6M2 555 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 KLHL7Q8IXQ5 586 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 ZNF653Q96CK0 615 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 SUFUQ9UMX1 484 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 MYOM1P52179 1685 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 MAPK4P31152 587 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 CACNB1Q02641 598 aaPredicted RBP11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 EPHA7Q15375 998 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 PTPN21Q16825 1174 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 RHPN2Q8IUC4 686 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 PARD3BQ8TEW8 1205 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 SKA2Q8WVK7 121 aaPredicted RBP11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 SPZ1Q9BXG8 430 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 ATP1A2P50993 1020 aa11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 KPNA2P52292 529 aaKnown RBP11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 ANTXR2P58335 489 aa11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 XXYLT1Q8NBI6 393 aa11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 BPIFA3Q9BQP9 254 aa11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 CXorf56Q9H5V9 222 aa11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 TACC3Q9Y6A5 838 aa11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 RRN3P2A6NIE6 340 aa11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 ASAP2O43150 1006 aa11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 SART1O43290 800 aaKnown RBP11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 SCP2P22307 547 aa11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 TBXAS1P24557 533 aaPredicted RBP11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 ADCY8P40145 1251 aa11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 PPP2R5CQ13362 524 aa11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 CCHCR1Q8TD31 782 aa11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 SEPT1Q8WYJ6 367 aa11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 ZNF148Q9UQR1 794 aa11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 MANSC4A6NHS7 340 aaPredicted RBP11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 MCF2LO15068 1137 aa11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 GUCY1A2P33402 732 aa11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 MXD4Q14582 209 aaPredicted RBP11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 PPP4R1Q8TF05 950 aa11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 KCNB2Q92953 911 aa11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 TRIM56Q9BRZ2 755 aaKnown RBP11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 TRIM31Q9BZY9 425 aa11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 EPB41L4AQ9HCS5 686 aaPredicted RBP11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 GCNT4Q9P109 453 aa11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 PAIP2BQ9ULR5 123 aaKnown RBP11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 HPCAL4Q9UM19 191 aa11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 DYNC1LI2O43237 492 aaPredicted RBP11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 MAP3K7O43318 606 aa11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 EVI5O60447 810 aa11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 TROVE2P10155 538 aaKnown RBP eCLIP11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 GYS1P13807 737 aa11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 CA4P22748 312 aa11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 PCYT1AP49585 367 aa11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 MTMR4Q9NYA4 1195 aa11.49□□□□□ -0.57
AMBRA1-202ENST00000458649 PASKQ96RG2 1323 aa11.48□□□□□ -0.57
AMBRA1-202ENST00000458649 DCDC2CA8MYV0 355 aa11.48□□□□□ -0.57
AMBRA1-202ENST00000458649 CLIC2O15247 247 aa11.48□□□□□ -0.57
AMBRA1-202ENST00000458649 BAG2O95816 211 aa11.48□□□□□ -0.57
AMBRA1-202ENST00000458649 HSPA6P17066 643 aa11.48□□□□□ -0.57
AMBRA1-202ENST00000458649 CEP55Q53EZ4 464 aa11.48□□□□□ -0.57
AMBRA1-202ENST00000458649 XKR3Q5GH77 459 aa11.48□□□□□ -0.57
AMBRA1-202ENST00000458649 SHC4Q6S5L8 630 aa11.48□□□□□ -0.57
AMBRA1-202ENST00000458649 UNC13DQ70J99 1090 aa11.48□□□□□ -0.57
AMBRA1-202ENST00000458649 SRBD1Q8N5C6 995 aaKnown RBP11.48□□□□□ -0.57
AMBRA1-202ENST00000458649 CALR3Q96L12 384 aaKnown RBP11.48□□□□□ -0.57
AMBRA1-202ENST00000458649 RAD51Q06609 339 aa11.48□□□□□ -0.57
AMBRA1-202ENST00000458649 ZNF699Q32M78 642 aa11.48□□□□□ -0.57
AMBRA1-202ENST00000458649 DENND2CQ68D51 928 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms