RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 DEXIO95424 95 aa24.22■■□□□ 1.47
CPNE1-220ENST00000458038 ALDH7A1P49419 539 aaKnown RBP24.22■■□□□ 1.47
CPNE1-220ENST00000458038 SMC1AQ14683 1233 aaKnown RBP24.22■■□□□ 1.47
CPNE1-220ENST00000458038 TPRNQ4KMQ1 711 aa24.22■■□□□ 1.47
CPNE1-220ENST00000458038 CLLU1OSQ5K130 101 aa24.22■■□□□ 1.47
CPNE1-220ENST00000458038 CPLX2Q6PUV4 134 aaKnown RBP24.22■■□□□ 1.47
CPNE1-220ENST00000458038 RNF169Q8NCN4 708 aa24.22■■□□□ 1.47
CPNE1-220ENST00000458038 CASP10Q92851 521 aa24.22■■□□□ 1.47
CPNE1-220ENST00000458038 ZNF274Q96GC6 653 aaPredicted RBP24.22■■□□□ 1.47
CPNE1-220ENST00000458038 JPH2Q9BR39 696 aaPredicted RBP24.22■■□□□ 1.47
CPNE1-220ENST00000458038 IGKV6-21A0A0C4DH24 114 aa24.21■■□□□ 1.47
CPNE1-220ENST00000458038 CPLX1O14810 134 aa24.21■■□□□ 1.47
CPNE1-220ENST00000458038 SFPQP23246 707 aaKnown RBP eCLIP24.21■■□□□ 1.478e-7■□□□□ 11.1
CPNE1-220ENST00000458038 RBM10P98175 930 aaKnown RBP24.21■■□□□ 1.47
CPNE1-220ENST00000458038 B3GNT9Q6UX72 402 aa24.21■■□□□ 1.47
CPNE1-220ENST00000458038 ZNF410Q86VK4 478 aa24.21■■□□□ 1.47
CPNE1-220ENST00000458038 SUGP1Q8IWZ8 645 aaKnown RBP24.21■■□□□ 1.47
CPNE1-220ENST00000458038 BLIDQ8IZY5 108 aa24.21■■□□□ 1.47
CPNE1-220ENST00000458038 SLC39A11Q8N1S5 342 aa24.21■■□□□ 1.47
CPNE1-220ENST00000458038 MRPL43Q8N983 215 aaKnown RBP24.21■■□□□ 1.47
CPNE1-220ENST00000458038 DAGLBQ8NCG7 672 aa24.21■■□□□ 1.47
CPNE1-220ENST00000458038 ZSWIM6Q9HCJ5 1215 aa24.21■■□□□ 1.47
CPNE1-220ENST00000458038 SEPT9Q9UHD8 586 aaPredicted RBP24.21■■□□□ 1.47
CPNE1-220ENST00000458038 CYP46A1Q9Y6A2 500 aa24.21■■□□□ 1.47
CPNE1-220ENST00000458038 HIDE1A8MVS5 230 aa24.2■■□□□ 1.46
CPNE1-220ENST00000458038 MRE11P49959 708 aa24.2■■□□□ 1.46
CPNE1-220ENST00000458038 SIGLEC14Q08ET2 396 aa24.2■■□□□ 1.46
CPNE1-220ENST00000458038 MTERF2Q49AM1 385 aa24.2■■□□□ 1.46
CPNE1-220ENST00000458038 SYCE2Q6PIF2 218 aa24.2■■□□□ 1.46
CPNE1-220ENST00000458038 EXOC8Q8IYI6 725 aa24.2■■□□□ 1.46
CPNE1-220ENST00000458038 MBOAT7Q96N66 472 aa24.2■■□□□ 1.46
CPNE1-220ENST00000458038 ITIH3Q06033 890 aa24.19■■□□□ 1.46
CPNE1-220ENST00000458038 HELQQ8TDG4 1101 aa24.19■■□□□ 1.46
CPNE1-220ENST00000458038 ZNF668Q96K58 619 aaPredicted RBP24.19■■□□□ 1.46
CPNE1-220ENST00000458038 NECTIN4Q96NY8 510 aa24.19■■□□□ 1.46
CPNE1-220ENST00000458038 CEP89Q96ST8 783 aa24.19■■□□□ 1.46
CPNE1-220ENST00000458038 NR2E1Q9Y466 385 aa24.19■■□□□ 1.46
CPNE1-220ENST00000458038 MYO10Q9HD67 2058 aa24.19■■□□□ 1.46
CPNE1-220ENST00000458038 DDX11L8A8MPP1 907 aa24.18■■□□□ 1.46
CPNE1-220ENST00000458038 M0R2N6 131 aa24.18■■□□□ 1.46
CPNE1-220ENST00000458038 DKC1O60832 514 aaKnown RBP eCLIP24.18■■□□□ 1.46
CPNE1-220ENST00000458038 MAFO75444 373 aaPredicted RBP24.18■■□□□ 1.46
CPNE1-220ENST00000458038 PBX3P40426 434 aa24.18■■□□□ 1.46
CPNE1-220ENST00000458038 PHKA2P46019 1235 aa24.18■■□□□ 1.46
CPNE1-220ENST00000458038 PSMC5P62195 406 aa24.18■■□□□ 1.46
CPNE1-220ENST00000458038 TOB2Q14106 344 aaPredicted RBP24.18■■□□□ 1.46
CPNE1-220ENST00000458038 NONOQ15233 471 aaKnown RBP eCLIP24.18■■□□□ 1.46
CPNE1-220ENST00000458038 CES5AQ6NT32 575 aa24.18■■□□□ 1.46
CPNE1-220ENST00000458038 FBXL6Q8N531 539 aa24.18■■□□□ 1.46
CPNE1-220ENST00000458038 ETNPPLQ8TBG4 499 aa24.18■■□□□ 1.46
CPNE1-220ENST00000458038 TMEM169Q96HH4 297 aa24.18■■□□□ 1.46
CPNE1-220ENST00000458038 TM6SF1Q9BZW5 370 aa24.18■■□□□ 1.46
CPNE1-220ENST00000458038 C2orf71A6NGG8 1288 aa24.17■■□□□ 1.46
CPNE1-220ENST00000458038 ZNF623O75123 536 aa24.17■■□□□ 1.46
CPNE1-220ENST00000458038 STBD1O95210 358 aa24.17■■□□□ 1.46
CPNE1-220ENST00000458038 FGFR4P22455 802 aa24.17■■□□□ 1.46
CPNE1-220ENST00000458038 RAB27AP51159 221 aa24.17■■□□□ 1.46
CPNE1-220ENST00000458038 BCAR1P56945 870 aa24.17■■□□□ 1.46
CPNE1-220ENST00000458038 GIT2Q14161 759 aa24.17■■□□□ 1.46
CPNE1-220ENST00000458038 PTPN21Q16825 1174 aa24.17■■□□□ 1.46
CPNE1-220ENST00000458038 TWF2Q6IBS0 349 aaKnown RBP24.17■■□□□ 1.46
CPNE1-220ENST00000458038 LLGL2Q6P1M3 1020 aa24.17■■□□□ 1.46
CPNE1-220ENST00000458038 KRT25Q7Z3Z0 450 aa24.17■■□□□ 1.46
CPNE1-220ENST00000458038 FAM20AQ96MK3 541 aa24.17■■□□□ 1.46
CPNE1-220ENST00000458038 SUCLA2Q9P2R7 463 aaPredicted RBP24.17■■□□□ 1.46
CPNE1-220ENST00000458038 PPME1Q9Y570 386 aa24.17■■□□□ 1.46
CPNE1-220ENST00000458038 CACNA1HO95180 2353 aa24.17■■□□□ 1.46
CPNE1-220ENST00000458038 A0A087WZ62 844 aa24.16■■□□□ 1.46
CPNE1-220ENST00000458038 TDP2O95551 362 aa24.16■■□□□ 1.46
CPNE1-220ENST00000458038 POLGP54098 1239 aaPredicted RBP24.16■■□□□ 1.46
CPNE1-220ENST00000458038 PTPN5P54829 565 aa24.16■■□□□ 1.46
CPNE1-220ENST00000458038 DRP2Q13474 957 aa24.16■■□□□ 1.46
CPNE1-220ENST00000458038 GLB1LQ6UWU2 654 aa24.16■■□□□ 1.46
CPNE1-220ENST00000458038 GJA10Q969M2 543 aa24.16■■□□□ 1.46
CPNE1-220ENST00000458038 FDXACB1Q9BRP7 624 aaPredicted RBP24.16■■□□□ 1.46
CPNE1-220ENST00000458038 ADAM7Q9H2U9 754 aa24.16■■□□□ 1.46
CPNE1-220ENST00000458038 STK39Q9UEW8 545 aa24.16■■□□□ 1.46
CPNE1-220ENST00000458038 DDX25Q9UHL0 483 aaKnown RBP24.16■■□□□ 1.46
CPNE1-220ENST00000458038 HCFC2Q9Y5Z7 792 aa24.16■■□□□ 1.46
CPNE1-220ENST00000458038 IRAK3Q9Y616 596 aa24.16■■□□□ 1.46
CPNE1-220ENST00000458038 CSDE1O75534 798 aaKnown RBP24.15■■□□□ 1.46
CPNE1-220ENST00000458038 CXCL14O95715 111 aa24.15■■□□□ 1.46
CPNE1-220ENST00000458038 RHPN2Q8IUC4 686 aa24.15■■□□□ 1.46
CPNE1-220ENST00000458038 TMEM87AQ8NBN3 555 aa24.15■■□□□ 1.46
CPNE1-220ENST00000458038 GCFC2P16383 781 aaKnown RBP24.14■■□□□ 1.45
CPNE1-220ENST00000458038 MTHFRP42898 656 aa24.14■■□□□ 1.45
CPNE1-220ENST00000458038 QARSP47897 775 aaKnown RBP24.14■■□□□ 1.45
CPNE1-220ENST00000458038 NOMO2Q5JPE7 1267 aa24.14■■□□□ 1.45
CPNE1-220ENST00000458038 CATSPER4Q7RTX7 472 aa24.14■■□□□ 1.45
CPNE1-220ENST00000458038 VPS52Q8N1B4 723 aa24.14■■□□□ 1.45
CPNE1-220ENST00000458038 PGBD4Q96DM1 585 aa24.14■■□□□ 1.45
CPNE1-220ENST00000458038 RIPOR3Q96MK2 946 aa24.14■■□□□ 1.45
CPNE1-220ENST00000458038 FAM105AQ9NUU6 356 aa24.14■■□□□ 1.45
CPNE1-220ENST00000458038 DZANK1Q9NVP4 752 aa24.14■■□□□ 1.45
CPNE1-220ENST00000458038 PIN4Q9Y237 131 aaKnown RBP24.14■■□□□ 1.45
CPNE1-220ENST00000458038 CLASP2O75122 1294 aaKnown RBP24.13■■□□□ 1.45
CPNE1-220ENST00000458038 ZC3H11AO75152 810 aaKnown RBP eCLIP24.13■■□□□ 1.45
CPNE1-220ENST00000458038 CDKL5O76039 1030 aa24.13■■□□□ 1.45
CPNE1-220ENST00000458038 XBP1P17861 261 aa24.13■■□□□ 1.45
CPNE1-220ENST00000458038 PPP2R5CQ13362 524 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms