RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 PLVAPQ9BX97 442 aa18.09■□□□□ 0.49
CPSF6-203ENST00000456847 PIN4Q9Y237 131 aaKnown RBP18.09■□□□□ 0.49
CPSF6-203ENST00000456847 HOXA2O43364 376 aa18.08■□□□□ 0.49
CPSF6-203ENST00000456847 SRGAP2CP0DJJ0 459 aa18.08■□□□□ 0.49
CPSF6-203ENST00000456847 AAK1Q2M2I8 961 aa18.08■□□□□ 0.49
CPSF6-203ENST00000456847 ECHDC2Q86YB7 292 aa18.08■□□□□ 0.49
CPSF6-203ENST00000456847 PIGOQ8TEQ8 1089 aa18.08■□□□□ 0.49
CPSF6-203ENST00000456847 PRPF31Q8WWY3 499 aaKnown RBP18.08■□□□□ 0.49
CPSF6-203ENST00000456847 ASB2Q96Q27 587 aa18.08■□□□□ 0.49
CPSF6-203ENST00000456847 TUFT1Q9NNX1 390 aa18.08■□□□□ 0.49
CPSF6-203ENST00000456847 COG5Q9UP83 839 aa18.08■□□□□ 0.49
CPSF6-203ENST00000456847 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.08■□□□□ 0.49
CPSF6-203ENST00000456847 FAM189BP81408 668 aa18.08■□□□□ 0.48
CPSF6-203ENST00000456847 TFF2Q03403 129 aa18.08■□□□□ 0.48
CPSF6-203ENST00000456847 LAMTOR4Q0VGL1 99 aa18.08■□□□□ 0.48
CPSF6-203ENST00000456847 TWF2Q6IBS0 349 aaKnown RBP18.08■□□□□ 0.48
CPSF6-203ENST00000456847 HLA-CQ95604 372 aa18.08■□□□□ 0.48
CPSF6-203ENST00000456847 LMAN2LQ9H0V9 348 aa18.08■□□□□ 0.48
CPSF6-203ENST00000456847 PLXNA4Q9HCM2 1894 aa18.07■□□□□ 0.48
CPSF6-203ENST00000456847 GRM6O15303 877 aa18.07■□□□□ 0.48
CPSF6-203ENST00000456847 FERMT3Q86UX7 667 aa18.07■□□□□ 0.48
CPSF6-203ENST00000456847 CHST12Q9NRB3 414 aa18.07■□□□□ 0.48
CPSF6-203ENST00000456847 AAASQ9NRG9 546 aa18.07■□□□□ 0.48
CPSF6-203ENST00000456847 TRANK1O15050 2925 aa18.07■□□□□ 0.48
CPSF6-203ENST00000456847 A0A087WWV3 80 aa18.06■□□□□ 0.48
CPSF6-203ENST00000456847 ASAP2O43150 1006 aa18.06■□□□□ 0.48
CPSF6-203ENST00000456847 USO1O60763 962 aaKnown RBP18.06■□□□□ 0.48
CPSF6-203ENST00000456847 MED24O75448 989 aa18.06■□□□□ 0.48
CPSF6-203ENST00000456847 DGAT1O75907 488 aa18.06■□□□□ 0.48
CPSF6-203ENST00000456847 PHKA2P46019 1235 aa18.06■□□□□ 0.48
CPSF6-203ENST00000456847 RARRES1P49788 294 aa18.06■□□□□ 0.48
CPSF6-203ENST00000456847 HAUS3Q68CZ6 603 aa18.06■□□□□ 0.48
CPSF6-203ENST00000456847 RNF149Q8NC42 400 aa18.06■□□□□ 0.48
CPSF6-203ENST00000456847 P2RX5Q93086 422 aa18.06■□□□□ 0.48
CPSF6-203ENST00000456847 TMEM117Q9H0C3 514 aa18.06■□□□□ 0.48
CPSF6-203ENST00000456847 NSUN3Q9H649 340 aaKnown RBP18.06■□□□□ 0.48
CPSF6-203ENST00000456847 IFT122Q9HBG6 1241 aa18.06■□□□□ 0.48
CPSF6-203ENST00000456847 ALG13Q9NP73 1137 aaKnown RBP18.06■□□□□ 0.48
CPSF6-203ENST00000456847 XPNPEP1Q9NQW7 623 aa18.06■□□□□ 0.48
CPSF6-203ENST00000456847 PCDHB6Q9Y5E3 794 aa18.06■□□□□ 0.48
CPSF6-203ENST00000456847 PCDHB12Q9Y5F1 795 aa18.06■□□□□ 0.48
CPSF6-203ENST00000456847 TFDP1Q14186 410 aa18.06■□□□□ 0.48
CPSF6-203ENST00000456847 NAALADL2Q58DX5 795 aa18.06■□□□□ 0.48
CPSF6-203ENST00000456847 SRGAP1Q7Z6B7 1085 aa18.06■□□□□ 0.48
CPSF6-203ENST00000456847 CATSPER3Q86XQ3 398 aa18.06■□□□□ 0.48
CPSF6-203ENST00000456847 POLR3CQ9BUI4 534 aaPredicted RBP18.06■□□□□ 0.48
CPSF6-203ENST00000456847 A0A0U1RQF3 1178 aa18.05■□□□□ 0.48
CPSF6-203ENST00000456847 SPATA31C1P0DKV0 1188 aa18.05■□□□□ 0.48
CPSF6-203ENST00000456847 PTGDRQ13258 359 aa18.05■□□□□ 0.48
CPSF6-203ENST00000456847 MXD4Q14582 209 aaPredicted RBP18.05■□□□□ 0.48
CPSF6-203ENST00000456847 TCEAL5Q5H9L2 206 aa18.05■□□□□ 0.48
CPSF6-203ENST00000456847 POTEGQ6S5H5 508 aa18.05■□□□□ 0.48
CPSF6-203ENST00000456847 LRRC43Q8N309 656 aa18.05■□□□□ 0.48
CPSF6-203ENST00000456847 KLHL23Q8NBE8 558 aa18.05■□□□□ 0.48
CPSF6-203ENST00000456847 BACH2Q9BYV9 841 aa18.05■□□□□ 0.48
CPSF6-203ENST00000456847 RAB34Q9BZG1 259 aa18.05■□□□□ 0.48
CPSF6-203ENST00000456847 HCSTQ9UBK5 93 aa18.05■□□□□ 0.48
CPSF6-203ENST00000456847 TCF20Q9UGU0 1960 aaKnown RBP18.04■□□□□ 0.48
CPSF6-203ENST00000456847 ERLIN2O94905 339 aa18.04■□□□□ 0.48
CPSF6-203ENST00000456847 SKIP12755 728 aa18.04■□□□□ 0.48
CPSF6-203ENST00000456847 XRCC6P12956 609 aaKnown RBP eCLIP18.04■□□□□ 0.489e-12■■■■□ 25
CPSF6-203ENST00000456847 CCT6AP40227 531 aaKnown RBP18.04■□□□□ 0.48
CPSF6-203ENST00000456847 TOB1P50616 345 aaPredicted RBP18.04■□□□□ 0.48
CPSF6-203ENST00000456847 FXR2P51116 673 aaKnown RBP eCLIP18.04■□□□□ 0.48
CPSF6-203ENST00000456847 NACC1Q96RE7 527 aa18.04■□□□□ 0.48
CPSF6-203ENST00000456847 POLR3FQ9H1D9 316 aaPredicted RBP18.04■□□□□ 0.48
CPSF6-203ENST00000456847 AGPAT5Q9NUQ2 364 aa18.04■□□□□ 0.48
CPSF6-203ENST00000456847 RNF19AQ9NV58 838 aa18.04■□□□□ 0.48
CPSF6-203ENST00000456847 TYW1Q9NV66 732 aaKnown RBP18.04■□□□□ 0.48
CPSF6-203ENST00000456847 LRWD1Q9UFC0 647 aa18.04■□□□□ 0.48
CPSF6-203ENST00000456847 PLAGL2Q9UPG8 496 aa18.04■□□□□ 0.48
CPSF6-203ENST00000456847 EOMESO95936 686 aa18.04■□□□□ 0.48
CPSF6-203ENST00000456847 ITGB1P05556 798 aa18.04■□□□□ 0.48
CPSF6-203ENST00000456847 LAG3P18627 525 aa18.04■□□□□ 0.48
CPSF6-203ENST00000456847 RPA1P27694 616 aa18.04■□□□□ 0.48
CPSF6-203ENST00000456847 KCNQ1P51787 676 aa18.04■□□□□ 0.48
CPSF6-203ENST00000456847 EP400NLQ6ZTU2 488 aa18.04■□□□□ 0.48
CPSF6-203ENST00000456847 MAEAQ7L5Y9 396 aa18.04■□□□□ 0.48
CPSF6-203ENST00000456847 THNSL1Q8IYQ7 743 aa18.04■□□□□ 0.48
CPSF6-203ENST00000456847 COLGALT1Q8NBJ5 622 aa18.04■□□□□ 0.48
CPSF6-203ENST00000456847 HELQQ8TDG4 1101 aa18.04■□□□□ 0.48
CPSF6-203ENST00000456847 CASD1Q96PB1 797 aa18.04■□□□□ 0.48
CPSF6-203ENST00000456847 UBE2ZQ9H832 354 aaPredicted RBP18.04■□□□□ 0.48
CPSF6-203ENST00000456847 PRUNE2Q8WUY3 3088 aa18.03■□□□□ 0.48
CPSF6-203ENST00000456847 UNC80Q8N2C7 3258 aa18.03■□□□□ 0.48
CPSF6-203ENST00000456847 ARHGEF35A5YM69 484 aa18.03■□□□□ 0.48
CPSF6-203ENST00000456847 RAB27AP51159 221 aa18.03■□□□□ 0.48
CPSF6-203ENST00000456847 RILPL1Q5EBL4 403 aa18.03■□□□□ 0.48
CPSF6-203ENST00000456847 CLLU1OSQ5K130 101 aa18.03■□□□□ 0.48
CPSF6-203ENST00000456847 C4orf32Q8N8J7 132 aa18.03■□□□□ 0.48
CPSF6-203ENST00000456847 ASAP3Q8TDY4 903 aa18.03■□□□□ 0.48
CPSF6-203ENST00000456847 MINDY3Q9H8M7 445 aa18.03■□□□□ 0.48
CPSF6-203ENST00000456847 FAM105AQ9NUU6 356 aa18.03■□□□□ 0.48
CPSF6-203ENST00000456847 DBR1Q9UK59 544 aaKnown RBP18.03■□□□□ 0.48
CPSF6-203ENST00000456847 LAD1O00515 517 aa18.02■□□□□ 0.48
CPSF6-203ENST00000456847 ATF7P17544 494 aaPredicted RBP18.02■□□□□ 0.48
CPSF6-203ENST00000456847 CAPSQ13938 189 aa18.02■□□□□ 0.48
CPSF6-203ENST00000456847 CSPP1Q1MSJ5 1256 aa18.02■□□□□ 0.48
CPSF6-203ENST00000456847 LONRF3Q496Y0 759 aa18.02■□□□□ 0.48
CPSF6-203ENST00000456847 LARP1BQ659C4 914 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms