RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 CHST12Q9NRB3 414 aa26.73■■□□□ 1.87
LYSMD2-202ENST00000454181 CCT2P78371 535 aaKnown RBP26.72■■□□□ 1.87
LYSMD2-202ENST00000454181 NTRK3Q16288 839 aa26.72■■□□□ 1.87
LYSMD2-202ENST00000454181 MTERF2Q49AM1 385 aa26.72■■□□□ 1.87
LYSMD2-202ENST00000454181 XKR3Q5GH77 459 aa26.72■■□□□ 1.87
LYSMD2-202ENST00000454181 FBXL16Q8N461 479 aa26.72■■□□□ 1.87
LYSMD2-202ENST00000454181 NECTIN4Q96NY8 510 aa26.72■■□□□ 1.87
LYSMD2-202ENST00000454181 CXCL14O95715 111 aa26.71■■□□□ 1.87
LYSMD2-202ENST00000454181 SFPQP23246 707 aaKnown RBP eCLIP26.71■■□□□ 1.87
LYSMD2-202ENST00000454181 TBCKQ8TEA7 893 aa26.71■■□□□ 1.87
LYSMD2-202ENST00000454181 INO80BQ9C086 356 aaPredicted RBP26.71■■□□□ 1.87
LYSMD2-202ENST00000454181 HCFC2Q9Y5Z7 792 aa26.71■■□□□ 1.87
LYSMD2-202ENST00000454181 CARNS1A5YM72 827 aa26.7■■□□□ 1.86
LYSMD2-202ENST00000454181 C2orf71A6NGG8 1288 aa26.7■■□□□ 1.86
LYSMD2-202ENST00000454181 CSDE1O75534 798 aaKnown RBP26.7■■□□□ 1.86
LYSMD2-202ENST00000454181 SKIP12755 728 aa26.7■■□□□ 1.86
LYSMD2-202ENST00000454181 BCAR1P56945 870 aa26.7■■□□□ 1.86
LYSMD2-202ENST00000454181 ITIH3Q06033 890 aa26.7■■□□□ 1.86
LYSMD2-202ENST00000454181 TARBP2Q15633 366 aaKnown RBP26.7■■□□□ 1.86
LYSMD2-202ENST00000454181 TWF2Q6IBS0 349 aaKnown RBP26.7■■□□□ 1.86
LYSMD2-202ENST00000454181 ZNF598Q86UK7 904 aaKnown RBP26.7■■□□□ 1.86
LYSMD2-202ENST00000454181 RSPH1Q8WYR4 309 aa26.7■■□□□ 1.86
LYSMD2-202ENST00000454181 GJA10Q969M2 543 aa26.7■■□□□ 1.86
LYSMD2-202ENST00000454181 NIFKQ9BYG3 293 aaKnown RBP26.7■■□□□ 1.86
LYSMD2-202ENST00000454181 NCOA5Q9HCD5 579 aaKnown RBP26.7■■□□□ 1.86
LYSMD2-202ENST00000454181 NT5C1B-RDH14C9J2C7 533 aa26.69■■□□□ 1.86
LYSMD2-202ENST00000454181 PDIA3P30101 505 aaKnown RBP26.69■■□□□ 1.86
LYSMD2-202ENST00000454181 SSRP1Q08945 709 aaKnown RBP26.69■■□□□ 1.86
LYSMD2-202ENST00000454181 Q4G0T1 1027 aa26.69■■□□□ 1.86
LYSMD2-202ENST00000454181 AGXT2Q9BYV1 514 aa26.69■■□□□ 1.86
LYSMD2-202ENST00000454181 IRF2BPLQ9H1B7 796 aa26.69■■□□□ 1.86
LYSMD2-202ENST00000454181 ADAM7Q9H2U9 754 aa26.69■■□□□ 1.86
LYSMD2-202ENST00000454181 PCDHA4Q9UN74 947 aa26.69■■□□□ 1.86
LYSMD2-202ENST00000454181 DDX11L8A8MPP1 907 aa26.68■■□□□ 1.86
LYSMD2-202ENST00000454181 CLASP2O75122 1294 aaKnown RBP26.68■■□□□ 1.86
LYSMD2-202ENST00000454181 ZC3H11AO75152 810 aaKnown RBP eCLIP26.68■■□□□ 1.86
LYSMD2-202ENST00000454181 PSMD10O75832 226 aa26.68■■□□□ 1.86
LYSMD2-202ENST00000454181 DRP2Q13474 957 aa26.68■■□□□ 1.86
LYSMD2-202ENST00000454181 GLB1LQ6UWU2 654 aa26.68■■□□□ 1.86
LYSMD2-202ENST00000454181 ASIC4Q96FT7 647 aa26.68■■□□□ 1.86
LYSMD2-202ENST00000454181 RIPOR3Q96MK2 946 aa26.68■■□□□ 1.86
LYSMD2-202ENST00000454181 SUCLA2Q9P2R7 463 aaPredicted RBP26.68■■□□□ 1.86
LYSMD2-202ENST00000454181 WDFY4Q6ZS81 3184 aa26.67■■□□□ 1.86
LYSMD2-202ENST00000454181 ZDBF2Q9HCK1 2354 aa26.67■■□□□ 1.86
LYSMD2-202ENST00000454181 A0A087WZ62 844 aa26.67■■□□□ 1.86
LYSMD2-202ENST00000454181 CPLX1O14810 134 aa26.67■■□□□ 1.86
LYSMD2-202ENST00000454181 EDIL3O43854 480 aa26.67■■□□□ 1.86
LYSMD2-202ENST00000454181 REC8O95072 547 aa26.67■■□□□ 1.86
LYSMD2-202ENST00000454181 MTHFRP42898 656 aa26.67■■□□□ 1.86
LYSMD2-202ENST00000454181 PHKA2P46019 1235 aa26.67■■□□□ 1.86
LYSMD2-202ENST00000454181 RNASELQ05823 741 aaKnown RBP26.67■■□□□ 1.86
LYSMD2-202ENST00000454181 ZNF410Q86VK4 478 aa26.67■■□□□ 1.86
LYSMD2-202ENST00000454181 RHPN2Q8IUC4 686 aa26.67■■□□□ 1.86
LYSMD2-202ENST00000454181 VPS52Q8N1B4 723 aa26.67■■□□□ 1.86
LYSMD2-202ENST00000454181 JPH2Q9BR39 696 aaPredicted RBP26.67■■□□□ 1.86
LYSMD2-202ENST00000454181 FDXACB1Q9BRP7 624 aaPredicted RBP26.67■■□□□ 1.86
LYSMD2-202ENST00000454181 PIN4Q9Y237 131 aaKnown RBP26.67■■□□□ 1.86
LYSMD2-202ENST00000454181 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP26.66■■□□□ 1.86
LYSMD2-202ENST00000454181 AVPR2P30518 371 aa26.66■■□□□ 1.86
LYSMD2-202ENST00000454181 GIT2Q14161 759 aa26.66■■□□□ 1.86
LYSMD2-202ENST00000454181 CATSPER4Q7RTX7 472 aa26.66■■□□□ 1.86
LYSMD2-202ENST00000454181 KREMEN2Q8NCW0 462 aa26.66■■□□□ 1.86
LYSMD2-202ENST00000454181 PHOX2BQ99453 314 aa26.66■■□□□ 1.86
LYSMD2-202ENST00000454181 SH2D3AQ9BRG2 576 aa26.66■■□□□ 1.86
LYSMD2-202ENST00000454181 INPP5FQ9Y2H2 1132 aa26.66■■□□□ 1.86
LYSMD2-202ENST00000454181 CYP3A7-CYP3A51PA0A087WV96 503 aa26.65■■□□□ 1.86
LYSMD2-202ENST00000454181 TDP2O95551 362 aa26.65■■□□□ 1.86
LYSMD2-202ENST00000454181 CYP3A7P24462 503 aa26.65■■□□□ 1.86
LYSMD2-202ENST00000454181 VCPP55072 806 aaKnown RBP26.65■■□□□ 1.86
LYSMD2-202ENST00000454181 TCF15Q12870 199 aa26.65■■□□□ 1.86
LYSMD2-202ENST00000454181 MTMR3Q13615 1198 aa26.65■■□□□ 1.86
LYSMD2-202ENST00000454181 LONRF3Q496Y0 759 aa26.65■■□□□ 1.86
LYSMD2-202ENST00000454181 CPLX2Q6PUV4 134 aaKnown RBP26.65■■□□□ 1.86
LYSMD2-202ENST00000454181 UBALD2Q8IYN6 164 aa26.65■■□□□ 1.86
LYSMD2-202ENST00000454181 BLIDQ8IZY5 108 aa26.65■■□□□ 1.86
LYSMD2-202ENST00000454181 TRAIPQ9BWF2 469 aa26.65■■□□□ 1.86
LYSMD2-202ENST00000454181 POMKQ9H5K3 350 aa26.65■■□□□ 1.86
LYSMD2-202ENST00000454181 DZANK1Q9NVP4 752 aa26.65■■□□□ 1.86
LYSMD2-202ENST00000454181 SORCS3Q9UPU3 1222 aa26.65■■□□□ 1.86
LYSMD2-202ENST00000454181 TMEM150BA6NC51 233 aa26.64■■□□□ 1.86
LYSMD2-202ENST00000454181 DEXIO95424 95 aa26.64■■□□□ 1.86
LYSMD2-202ENST00000454181 RAB27AP51159 221 aa26.64■■□□□ 1.86
LYSMD2-202ENST00000454181 POLGP54098 1239 aaPredicted RBP26.64■■□□□ 1.86
LYSMD2-202ENST00000454181 EVCP57679 992 aa26.64■■□□□ 1.86
LYSMD2-202ENST00000454181 NOMO2Q5JPE7 1267 aa26.64■■□□□ 1.86
LYSMD2-202ENST00000454181 ATAT1Q5SQI0 421 aa26.64■■□□□ 1.86
LYSMD2-202ENST00000454181 RARS2Q5T160 578 aaKnown RBP26.64■■□□□ 1.86
LYSMD2-202ENST00000454181 LPPQ93052 612 aa26.64■■□□□ 1.86
LYSMD2-202ENST00000454181 PGBD4Q96DM1 585 aa26.64■■□□□ 1.86
LYSMD2-202ENST00000454181 NLRP4Q96MN2 994 aa26.64■■□□□ 1.86
LYSMD2-202ENST00000454181 FAM105AQ9NUU6 356 aa26.64■■□□□ 1.86
LYSMD2-202ENST00000454181 CDH22Q9UJ99 828 aa26.64■■□□□ 1.86
LYSMD2-202ENST00000454181 IGKV6-21A0A0C4DH24 114 aa26.63■■□□□ 1.85
LYSMD2-202ENST00000454181 MAFO75444 373 aaPredicted RBP26.63■■□□□ 1.85
LYSMD2-202ENST00000454181 PSMC5P62195 406 aa26.63■■□□□ 1.85
LYSMD2-202ENST00000454181 GALNT17Q6IS24 598 aa26.63■■□□□ 1.85
LYSMD2-202ENST00000454181 DDX53Q86TM3 631 aaKnown RBP26.63■■□□□ 1.85
LYSMD2-202ENST00000454181 ZBP1Q9H171 429 aa26.63■■□□□ 1.85
LYSMD2-202ENST00000454181 SLKQ9H2G2 1235 aaPredicted RBP26.63■■□□□ 1.85
LYSMD2-202ENST00000454181 DDX25Q9UHL0 483 aaKnown RBP26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms