RNA–Protein interactions for RNA: ENST00000453056.5

VPS8-213, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-213ENST00000453056 RGS18Q9NS28 235 aa17.22■□□□□ 0.35
VPS8-213ENST00000453056 PCDHB7Q9Y5E2 793 aa17.22■□□□□ 0.35
VPS8-213ENST00000453056 PRRC2BQ5JSZ5 2229 aaKnown RBP17.22■□□□□ 0.35
VPS8-213ENST00000453056 MYH11P35749 1972 aa17.22■□□□□ 0.35
VPS8-213ENST00000453056 ADGRA3Q8IWK6 1321 aa17.21■□□□□ 0.35
VPS8-213ENST00000453056 A0A087WWV3 80 aa17.21■□□□□ 0.35
VPS8-213ENST00000453056 LINC01553A4QN01 128 aa17.21■□□□□ 0.35
VPS8-213ENST00000453056 MGEA5O60502 916 aa17.21■□□□□ 0.35
VPS8-213ENST00000453056 LONP1P36776 959 aaKnown RBP17.21■□□□□ 0.35
VPS8-213ENST00000453056 UBA7P41226 1012 aa17.21■□□□□ 0.35
VPS8-213ENST00000453056 DSC3Q14574 896 aa17.21■□□□□ 0.35
VPS8-213ENST00000453056 PCBP1Q15365 356 aaKnown RBP eCLIP17.21■□□□□ 0.35
VPS8-213ENST00000453056 FAM102BQ5T8I3 360 aa17.21■□□□□ 0.35
VPS8-213ENST00000453056 RTN4RL1Q86UN2 441 aaPredicted RBP17.21■□□□□ 0.35
VPS8-213ENST00000453056 RASSF8Q8NHQ8 419 aa17.21■□□□□ 0.35
VPS8-213ENST00000453056 MYLIPQ8WY64 445 aa17.21■□□□□ 0.35
VPS8-213ENST00000453056 ARNTL2Q8WYA1 636 aa17.21■□□□□ 0.35
VPS8-213ENST00000453056 SAMD11Q96NU1 681 aa17.21■□□□□ 0.35
VPS8-213ENST00000453056 PRDM12Q9H4Q4 367 aa17.21■□□□□ 0.35
VPS8-213ENST00000453056 CHST12Q9NRB3 414 aa17.21■□□□□ 0.35
VPS8-213ENST00000453056 C9IYK1 514 aa17.2■□□□□ 0.34
VPS8-213ENST00000453056 HOXA2O43364 376 aa17.2■□□□□ 0.34
VPS8-213ENST00000453056 CSDE1O75534 798 aaKnown RBP17.2■□□□□ 0.34
VPS8-213ENST00000453056 ERLIN2O94905 339 aa17.2■□□□□ 0.34
VPS8-213ENST00000453056 EYA4O95677 639 aa17.2■□□□□ 0.34
VPS8-213ENST00000453056 CYP11B2P19099 503 aa17.2■□□□□ 0.34
VPS8-213ENST00000453056 FGFR4P22455 802 aa17.2■□□□□ 0.34
VPS8-213ENST00000453056 CDC25AP30304 524 aa17.2■□□□□ 0.34
VPS8-213ENST00000453056 ARL2P36404 184 aa17.2■□□□□ 0.34
VPS8-213ENST00000453056 ECM1Q16610 540 aa17.2■□□□□ 0.34
VPS8-213ENST00000453056 CABP7Q86V35 215 aa17.2■□□□□ 0.34
VPS8-213ENST00000453056 FIBCD1Q8N539 461 aa17.2■□□□□ 0.34
VPS8-213ENST00000453056 ASAP3Q8TDY4 903 aa17.2■□□□□ 0.34
VPS8-213ENST00000453056 CALML4Q96GE6 196 aa17.2■□□□□ 0.34
VPS8-213ENST00000453056 ZNF396Q96N95 335 aaPredicted RBP17.2■□□□□ 0.34
VPS8-213ENST00000453056 MMTAG2Q9BU76 263 aaKnown RBP17.2■□□□□ 0.34
VPS8-213ENST00000453056 IFT122Q9HBG6 1241 aa17.2■□□□□ 0.34
VPS8-213ENST00000453056 PIN4Q9Y237 131 aaKnown RBP17.2■□□□□ 0.34
VPS8-213ENST00000453056 RWDD3Q9Y3V2 267 aa17.2■□□□□ 0.34
VPS8-213ENST00000453056 CLIC4Q9Y696 253 aa17.2■□□□□ 0.34
VPS8-213ENST00000453056 FNDC1Q4ZHG4 1894 aaPredicted RBP17.2■□□□□ 0.34
VPS8-213ENST00000453056 COL4A4P53420 1690 aaPredicted RBP17.2■□□□□ 0.34
VPS8-213ENST00000453056 LRRIQ4A6NIV6 560 aa17.19■□□□□ 0.34
VPS8-213ENST00000453056 DGKIO75912 1065 aa17.19■□□□□ 0.34
VPS8-213ENST00000453056 ARHGEF15O94989 841 aa17.19■□□□□ 0.34
VPS8-213ENST00000453056 SKIP12755 728 aa17.19■□□□□ 0.34
VPS8-213ENST00000453056 PTENP60484 403 aa17.19■□□□□ 0.34
VPS8-213ENST00000453056 ERVK-21P61565 698 aa17.19■□□□□ 0.34
VPS8-213ENST00000453056 POU5F1BQ06416 359 aa17.19■□□□□ 0.34
VPS8-213ENST00000453056 NCBP1Q09161 790 aaKnown RBP17.19■□□□□ 0.34
VPS8-213ENST00000453056 CAPSQ13938 189 aa17.19■□□□□ 0.34
VPS8-213ENST00000453056 BTG3Q14201 252 aaPredicted RBP17.19■□□□□ 0.34
VPS8-213ENST00000453056 PPP2R5AQ15172 486 aa17.19■□□□□ 0.34
VPS8-213ENST00000453056 HYIQ5T013 277 aa17.19■□□□□ 0.34
VPS8-213ENST00000453056 TWF2Q6IBS0 349 aaKnown RBP17.19■□□□□ 0.34
VPS8-213ENST00000453056 MAEAQ7L5Y9 396 aa17.19■□□□□ 0.34
VPS8-213ENST00000453056 ZBTB8OSQ8IWT0 167 aa17.19■□□□□ 0.34
VPS8-213ENST00000453056 CMTR2Q8IYT2 770 aaKnown RBP17.19■□□□□ 0.34
VPS8-213ENST00000453056 SPRYD3Q8NCJ5 442 aa17.19■□□□□ 0.34
VPS8-213ENST00000453056 KIFAP3Q92845 792 aa17.19■□□□□ 0.34
VPS8-213ENST00000453056 NFKBIZQ9BYH8 718 aa17.19■□□□□ 0.34
VPS8-213ENST00000453056 ELAC1Q9H777 363 aaKnown RBP17.19■□□□□ 0.34
VPS8-213ENST00000453056 CERS4Q9HA82 394 aa17.19■□□□□ 0.34
VPS8-213ENST00000453056 AGPAT5Q9NUQ2 364 aa17.19■□□□□ 0.34
VPS8-213ENST00000453056 TMEM161AQ9NX61 479 aa17.19■□□□□ 0.34
VPS8-213ENST00000453056 TRANK1O15050 2925 aa17.19■□□□□ 0.34
VPS8-213ENST00000453056 INO80B-WBP1J3KQ70 363 aa17.18■□□□□ 0.34
VPS8-213ENST00000453056 GTPBP6O43824 516 aaPredicted RBP17.18■□□□□ 0.34
VPS8-213ENST00000453056 ZSCAN22P10073 491 aaPredicted RBP17.18■□□□□ 0.34
VPS8-213ENST00000453056 GLRA2P23416 452 aa17.18■□□□□ 0.34
VPS8-213ENST00000453056 TXLNAP40222 546 aa17.18■□□□□ 0.34
VPS8-213ENST00000453056 RAB27AP51159 221 aa17.18■□□□□ 0.34
VPS8-213ENST00000453056 CEBPZQ03701 1054 aaKnown RBP17.18■□□□□ 0.34
VPS8-213ENST00000453056 STK38Q15208 465 aa17.18■□□□□ 0.34
VPS8-213ENST00000453056 PTPAQ15257 358 aa17.18■□□□□ 0.34
VPS8-213ENST00000453056 FAM173BQ6P4H8 233 aa17.18■□□□□ 0.34
VPS8-213ENST00000453056 IFNLR1Q8IU57 520 aaPredicted RBP17.18■□□□□ 0.34
VPS8-213ENST00000453056 IFT74Q96LB3 600 aa17.18■□□□□ 0.34
VPS8-213ENST00000453056 USP28Q96RU2 1077 aa17.18■□□□□ 0.34
VPS8-213ENST00000453056 C2orf40Q9H1Z8 148 aa17.18■□□□□ 0.34
VPS8-213ENST00000453056 RC3H2Q9HBD1 1191 aaKnown RBP17.18■□□□□ 0.34
VPS8-213ENST00000453056 GPRC5CQ9NQ84 441 aa17.18■□□□□ 0.34
VPS8-213ENST00000453056 MTUS1Q9ULD2 1270 aa17.18■□□□□ 0.34
VPS8-213ENST00000453056 MORC2Q9Y6X9 1032 aaPredicted RBP17.18■□□□□ 0.34
VPS8-213ENST00000453056 MYO7AQ13402 2215 aa17.18■□□□□ 0.34
VPS8-213ENST00000453056 E9PMD0 336 aa17.17■□□□□ 0.34
VPS8-213ENST00000453056 F13A1P00488 732 aa17.17■□□□□ 0.34
VPS8-213ENST00000453056 SSBP05455 408 aaKnown RBP eCLIP17.17■□□□□ 0.34
VPS8-213ENST00000453056 MARCKSP29966 332 aaPredicted RBP17.17■□□□□ 0.34
VPS8-213ENST00000453056 FAM189BP81408 668 aa17.17■□□□□ 0.34
VPS8-213ENST00000453056 TMEM119Q4V9L6 283 aa17.17■□□□□ 0.34
VPS8-213ENST00000453056 FOXD4L5Q5VV16 416 aaPredicted RBP17.17■□□□□ 0.34
VPS8-213ENST00000453056 ECHDC2Q86YB7 292 aa17.17■□□□□ 0.34
VPS8-213ENST00000453056 ABI1Q8IZP0 508 aa17.17■□□□□ 0.34
VPS8-213ENST00000453056 FBXO22Q8NEZ5 403 aa17.17■□□□□ 0.34
VPS8-213ENST00000453056 FOXD4L4Q8WXT5 416 aaPredicted RBP17.17■□□□□ 0.34
VPS8-213ENST00000453056 ZNF689Q96CS4 500 aaPredicted RBP17.17■□□□□ 0.34
VPS8-213ENST00000453056 CCDC51Q96ER9 411 aa17.17■□□□□ 0.34
VPS8-213ENST00000453056 TIPINQ9BVW5 301 aa17.17■□□□□ 0.34
VPS8-213ENST00000453056 BRWD1Q9NSI6 2320 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms