RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 ECHDC2Q86YB7 292 aa20.65■□□□□ 0.9
PDLIM2-214ENST00000452226 CASD1Q96PB1 797 aa20.65■□□□□ 0.9
PDLIM2-214ENST00000452226 SH2D3AQ9BRG2 576 aa20.65■□□□□ 0.9
PDLIM2-214ENST00000452226 TLR9Q9NR96 1032 aa20.65■□□□□ 0.9
PDLIM2-214ENST00000452226 RNF19AQ9NV58 838 aa20.65■□□□□ 0.9
PDLIM2-214ENST00000452226 C19orf67A6NJJ6 358 aa20.64■□□□□ 0.89
PDLIM2-214ENST00000452226 CSDE1O75534 798 aaKnown RBP20.64■□□□□ 0.89
PDLIM2-214ENST00000452226 DNM2P50570 870 aa20.64■□□□□ 0.89
PDLIM2-214ENST00000452226 PPP4R3AQ6IN85 833 aa20.64■□□□□ 0.89
PDLIM2-214ENST00000452226 NEK8Q86SG6 692 aa20.64■□□□□ 0.89
PDLIM2-214ENST00000452226 ABI1Q8IZP0 508 aa20.64■□□□□ 0.89
PDLIM2-214ENST00000452226 RNF169Q8NCN4 708 aa20.64■□□□□ 0.89
PDLIM2-214ENST00000452226 MSLNLQ96KJ4 702 aa20.64■□□□□ 0.89
PDLIM2-214ENST00000452226 CEP89Q96ST8 783 aa20.64■□□□□ 0.89
PDLIM2-214ENST00000452226 TLE6Q9H808 572 aa20.64■□□□□ 0.89
PDLIM2-214ENST00000452226 BRMS1Q9HCU9 246 aa20.64■□□□□ 0.89
PDLIM2-214ENST00000452226 BTBD18B2RXH4 712 aa20.63■□□□□ 0.89
PDLIM2-214ENST00000452226 ERVFC1P60507 584 aa20.63■□□□□ 0.89
PDLIM2-214ENST00000452226 PSMC5P62195 406 aa20.63■□□□□ 0.89
PDLIM2-214ENST00000452226 CDC42EP1Q00587 391 aa20.63■□□□□ 0.89
PDLIM2-214ENST00000452226 TRIM29Q14134 588 aa20.63■□□□□ 0.89
PDLIM2-214ENST00000452226 LRRC55Q6ZSA7 311 aa20.63■□□□□ 0.89
PDLIM2-214ENST00000452226 DIS3L2Q8IYB7 885 aaKnown RBP20.63■□□□□ 0.89
PDLIM2-214ENST00000452226 TMX3Q96JJ7 454 aa20.63■□□□□ 0.89
PDLIM2-214ENST00000452226 GCOM2Q9BZD3 368 aaPredicted RBP20.63■□□□□ 0.89
PDLIM2-214ENST00000452226 CLEC1BQ9P126 229 aa20.63■□□□□ 0.89
PDLIM2-214ENST00000452226 IGKV6-21A0A0C4DH24 114 aa20.62■□□□□ 0.89
PDLIM2-214ENST00000452226 A0A0U1RQF3 1178 aa20.62■□□□□ 0.89
PDLIM2-214ENST00000452226 FAM205CA6NFA0 338 aa20.62■□□□□ 0.89
PDLIM2-214ENST00000452226 EML1O00423 815 aa20.62■□□□□ 0.89
PDLIM2-214ENST00000452226 PER2O15055 1255 aa20.62■□□□□ 0.89
PDLIM2-214ENST00000452226 EYA4O95677 639 aa20.62■□□□□ 0.89
PDLIM2-214ENST00000452226 GLP2RO95838 553 aa20.62■□□□□ 0.89
PDLIM2-214ENST00000452226 GCFC2P16383 781 aaKnown RBP20.62■□□□□ 0.89
PDLIM2-214ENST00000452226 MCM2P49736 904 aa20.62■□□□□ 0.89
PDLIM2-214ENST00000452226 PPP2R5CQ13362 524 aa20.62■□□□□ 0.89
PDLIM2-214ENST00000452226 LRRC43Q8N309 656 aa20.62■□□□□ 0.89
PDLIM2-214ENST00000452226 FAM20AQ96MK3 541 aa20.62■□□□□ 0.89
PDLIM2-214ENST00000452226 KCNMB3Q9NPA1 279 aa20.62■□□□□ 0.89
PDLIM2-214ENST00000452226 DACT1Q9NYF0 836 aa20.62■□□□□ 0.89
PDLIM2-214ENST00000452226 SUCLA2Q9P2R7 463 aaPredicted RBP20.62■□□□□ 0.89
PDLIM2-214ENST00000452226 A0A087WZ62 844 aa20.61■□□□□ 0.89
PDLIM2-214ENST00000452226 MAFO75444 373 aaPredicted RBP20.61■□□□□ 0.89
PDLIM2-214ENST00000452226 EOMESO95936 686 aa20.61■□□□□ 0.89
PDLIM2-214ENST00000452226 FOSBP53539 338 aa20.61■□□□□ 0.89
PDLIM2-214ENST00000452226 CLLU1OSQ5K130 101 aa20.61■□□□□ 0.89
PDLIM2-214ENST00000452226 PLA2G4FQ68DD2 849 aa20.61■□□□□ 0.89
PDLIM2-214ENST00000452226 PDE12Q6L8Q7 609 aaKnown RBP20.61■□□□□ 0.89
PDLIM2-214ENST00000452226 KCNT2Q6UVM3 1135 aa20.61■□□□□ 0.89
PDLIM2-214ENST00000452226 ANO5Q75V66 913 aa20.61■□□□□ 0.89
PDLIM2-214ENST00000452226 ZNF598Q86UK7 904 aaKnown RBP20.61■□□□□ 0.89
PDLIM2-214ENST00000452226 SMRP1Q8NCR6 262 aa20.61■□□□□ 0.89
PDLIM2-214ENST00000452226 FBXO18Q8NFZ0 1043 aa20.61■□□□□ 0.89
PDLIM2-214ENST00000452226 MRPS27Q92552 414 aaKnown RBP20.61■□□□□ 0.89
PDLIM2-214ENST00000452226 C8orf76Q96K31 380 aa20.61■□□□□ 0.89
PDLIM2-214ENST00000452226 ZNF558Q96NG5 402 aa20.61■□□□□ 0.89
PDLIM2-214ENST00000452226 NAP1L4Q99733 375 aaKnown RBP20.61■□□□□ 0.89
PDLIM2-214ENST00000452226 FDXACB1Q9BRP7 624 aaPredicted RBP20.61■□□□□ 0.89
PDLIM2-214ENST00000452226 PUF60Q9UHX1 559 aaKnown RBP20.61■□□□□ 0.89
PDLIM2-214ENST00000452226 VAV3Q9UKW4 847 aa20.61■□□□□ 0.89
PDLIM2-214ENST00000452226 BARX2Q9UMQ3 279 aaPredicted RBP20.61■□□□□ 0.89
PDLIM2-214ENST00000452226 LZTS1Q9Y250 596 aa20.61■□□□□ 0.89
PDLIM2-214ENST00000452226 FSCN2O14926 492 aa20.6■□□□□ 0.89
PDLIM2-214ENST00000452226 CCNT1O60563 726 aaKnown RBP20.6■□□□□ 0.89
PDLIM2-214ENST00000452226 PBX3P40426 434 aa20.6■□□□□ 0.89
PDLIM2-214ENST00000452226 QARSP47897 775 aaKnown RBP20.6■□□□□ 0.89
PDLIM2-214ENST00000452226 PLCB3Q01970 1234 aa20.6■□□□□ 0.89
PDLIM2-214ENST00000452226 COASYQ13057 564 aa20.6■□□□□ 0.89
PDLIM2-214ENST00000452226 ZNF410Q86VK4 478 aa20.6■□□□□ 0.89
PDLIM2-214ENST00000452226 RHPN2Q8IUC4 686 aa20.6■□□□□ 0.89
PDLIM2-214ENST00000452226 CDCA3Q99618 268 aaPredicted RBP20.6■□□□□ 0.89
PDLIM2-214ENST00000452226 KCNH6Q9H252 994 aa20.6■□□□□ 0.89
PDLIM2-214ENST00000452226 CHST12Q9NRB3 414 aa20.6■□□□□ 0.89
PDLIM2-214ENST00000452226 MUC6Q6W4X9 2439 aa20.59■□□□□ 0.89
PDLIM2-214ENST00000452226 ATF7P17544 494 aaPredicted RBP20.59■□□□□ 0.89
PDLIM2-214ENST00000452226 SFPQP23246 707 aaKnown RBP eCLIP20.59■□□□□ 0.89
PDLIM2-214ENST00000452226 PPM1AP35813 382 aa20.59■□□□□ 0.89
PDLIM2-214ENST00000452226 DUSP6Q16828 381 aa20.59■□□□□ 0.89
PDLIM2-214ENST00000452226 PLPP4Q5VZY2 271 aa20.59■□□□□ 0.89
PDLIM2-214ENST00000452226 HELQQ8TDG4 1101 aa20.59■□□□□ 0.89
PDLIM2-214ENST00000452226 HAS1Q92839 578 aa20.59■□□□□ 0.89
PDLIM2-214ENST00000452226 JPH2Q9BR39 696 aaPredicted RBP20.59■□□□□ 0.89
PDLIM2-214ENST00000452226 INO80BQ9C086 356 aaPredicted RBP20.59■□□□□ 0.89
PDLIM2-214ENST00000452226 ENTPD7Q9NQZ7 604 aa20.59■□□□□ 0.89
PDLIM2-214ENST00000452226 CYP26B1Q9NR63 512 aa20.59■□□□□ 0.89
PDLIM2-214ENST00000452226 SPG21Q9NZD8 308 aa20.59■□□□□ 0.89
PDLIM2-214ENST00000452226 FSD2A1L4K1 749 aa20.58■□□□□ 0.89
PDLIM2-214ENST00000452226 TBX3O15119 743 aa20.58■□□□□ 0.89
PDLIM2-214ENST00000452226 MARCH6O60337 910 aa20.58■□□□□ 0.89
PDLIM2-214ENST00000452226 DKC1O60832 514 aaKnown RBP eCLIP20.58■□□□□ 0.89
PDLIM2-214ENST00000452226 P4HBP07237 508 aaKnown RBP20.58■□□□□ 0.89
PDLIM2-214ENST00000452226 NPEPPSP55786 919 aa20.58■□□□□ 0.89
PDLIM2-214ENST00000452226 RBM10P98175 930 aaKnown RBP20.58■□□□□ 0.89
PDLIM2-214ENST00000452226 GUCY1B3Q02153 619 aa20.58■□□□□ 0.89
PDLIM2-214ENST00000452226 KRT17Q04695 432 aa20.58■□□□□ 0.89
PDLIM2-214ENST00000452226 SAFBQ15424 915 aaKnown RBP eCLIP20.58■□□□□ 0.89
PDLIM2-214ENST00000452226 KSR1Q8IVT5 923 aa20.58■□□□□ 0.89
PDLIM2-214ENST00000452226 FAM184AQ8NB25 1140 aa20.58■□□□□ 0.89
PDLIM2-214ENST00000452226 VN1R2Q8NFZ6 395 aa20.58■□□□□ 0.89
PDLIM2-214ENST00000452226 MFSD14AQ96MC6 490 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms