RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 MCTP2Q6DN12 878 aa20.34■□□□□ 0.85
CHCHD3-203ENST00000448878 KIAA1841Q6NSI8 718 aa20.34■□□□□ 0.85
CHCHD3-203ENST00000448878 TMC5Q6UXY8 1006 aa20.34■□□□□ 0.85
CHCHD3-203ENST00000448878 FRMD5Q7Z6J6 570 aa20.34■□□□□ 0.85
CHCHD3-203ENST00000448878 ZDHHC14Q8IZN3 488 aa20.34■□□□□ 0.85
CHCHD3-203ENST00000448878 REXO1Q8N1G1 1221 aaKnown RBP20.34■□□□□ 0.85
CHCHD3-203ENST00000448878 CCDC12Q8WUD4 166 aaPredicted RBP20.34■□□□□ 0.85
CHCHD3-203ENST00000448878 GCOM2Q9BZD3 368 aaPredicted RBP20.34■□□□□ 0.85
CHCHD3-203ENST00000448878 GBP3Q9H0R5 595 aa20.34■□□□□ 0.85
CHCHD3-203ENST00000448878 INPP5FQ9Y2H2 1132 aa20.34■□□□□ 0.85
CHCHD3-203ENST00000448878 PLXNA3P51805 1871 aa20.34■□□□□ 0.85
CHCHD3-203ENST00000448878 MYO10Q9HD67 2058 aa20.34■□□□□ 0.85
CHCHD3-203ENST00000448878 ADAMTS3O15072 1205 aa20.33■□□□□ 0.85
CHCHD3-203ENST00000448878 IRX6P78412 446 aaPredicted RBP20.33■□□□□ 0.85
CHCHD3-203ENST00000448878 FOXK2Q01167 660 aa20.33■□□□□ 0.85
CHCHD3-203ENST00000448878 EXOSC10Q01780 885 aaKnown RBP20.33■□□□□ 0.85
CHCHD3-203ENST00000448878 PRKCEQ02156 737 aa20.33■□□□□ 0.85
CHCHD3-203ENST00000448878 TWF2Q6IBS0 349 aaKnown RBP20.33■□□□□ 0.85
CHCHD3-203ENST00000448878 ZNF598Q86UK7 904 aaKnown RBP20.33■□□□□ 0.85
CHCHD3-203ENST00000448878 LINC01465Q8N7H1 131 aa20.33■□□□□ 0.85
CHCHD3-203ENST00000448878 LPPQ93052 612 aa20.33■□□□□ 0.85
CHCHD3-203ENST00000448878 NKD2Q969F2 451 aaPredicted RBP20.33■□□□□ 0.85
CHCHD3-203ENST00000448878 ACSF2Q96CM8 615 aaPredicted RBP20.33■□□□□ 0.85
CHCHD3-203ENST00000448878 ZBP1Q9H171 429 aa20.33■□□□□ 0.85
CHCHD3-203ENST00000448878 CYP26B1Q9NR63 512 aa20.33■□□□□ 0.85
CHCHD3-203ENST00000448878 CFAP54Q96N23 3096 aa20.33■□□□□ 0.84
CHCHD3-203ENST00000448878 STK25O00506 426 aa20.32■□□□□ 0.84
CHCHD3-203ENST00000448878 ZNF862O60290 1169 aa20.32■□□□□ 0.84
CHCHD3-203ENST00000448878 GNA11P29992 359 aa20.32■□□□□ 0.84
CHCHD3-203ENST00000448878 CLCN5P51795 746 aa20.32■□□□□ 0.84
CHCHD3-203ENST00000448878 GIT2Q14161 759 aa20.32■□□□□ 0.84
CHCHD3-203ENST00000448878 MTERF2Q49AM1 385 aa20.32■□□□□ 0.84
CHCHD3-203ENST00000448878 CRYGNQ8WXF5 182 aa20.32■□□□□ 0.84
CHCHD3-203ENST00000448878 ZMYND12Q9H0C1 365 aa20.32■□□□□ 0.84
CHCHD3-203ENST00000448878 FAM217BQ9NTX9 383 aaPredicted RBP20.32■□□□□ 0.84
CHCHD3-203ENST00000448878 FBXL21Q9UKT6 434 aa20.32■□□□□ 0.84
CHCHD3-203ENST00000448878 CCDC196A0A1B0GTZ2 297 aa20.31■□□□□ 0.84
CHCHD3-203ENST00000448878 GAS7O60861 476 aa20.31■□□□□ 0.84
CHCHD3-203ENST00000448878 SSBP05455 408 aaKnown RBP eCLIP20.31■□□□□ 0.84
CHCHD3-203ENST00000448878 CTSAP10619 480 aa20.31■□□□□ 0.84
CHCHD3-203ENST00000448878 PHKA2P46019 1235 aa20.31■□□□□ 0.84
CHCHD3-203ENST00000448878 AKAP17AQ02040 695 aaKnown RBP20.31■□□□□ 0.84
CHCHD3-203ENST00000448878 UGCGQ16739 394 aa20.31■□□□□ 0.84
CHCHD3-203ENST00000448878 GLB1LQ6UWU2 654 aa20.31■□□□□ 0.84
CHCHD3-203ENST00000448878 DDX53Q86TM3 631 aaKnown RBP20.31■□□□□ 0.84
CHCHD3-203ENST00000448878 TMEM173Q86WV6 379 aaPredicted RBP20.31■□□□□ 0.84
CHCHD3-203ENST00000448878 IGSF21Q96ID5 467 aa20.31■□□□□ 0.84
CHCHD3-203ENST00000448878 CHST12Q9NRB3 414 aa20.31■□□□□ 0.84
CHCHD3-203ENST00000448878 SEPT9Q9UHD8 586 aaPredicted RBP20.31■□□□□ 0.84
CHCHD3-203ENST00000448878 PIN4Q9Y237 131 aaKnown RBP20.31■□□□□ 0.84
CHCHD3-203ENST00000448878 USTQ9Y2C2 406 aa20.31■□□□□ 0.84
CHCHD3-203ENST00000448878 A0A087WZ62 844 aa20.3■□□□□ 0.84
CHCHD3-203ENST00000448878 SKIP12755 728 aa20.3■□□□□ 0.84
CHCHD3-203ENST00000448878 SFPQP23246 707 aaKnown RBP eCLIP20.3■□□□□ 0.84
CHCHD3-203ENST00000448878 KLRC2P26717 231 aa20.3■□□□□ 0.84
CHCHD3-203ENST00000448878 DNM2P50570 870 aa20.3■□□□□ 0.84
CHCHD3-203ENST00000448878 POLGP54098 1239 aaPredicted RBP20.3■□□□□ 0.84
CHCHD3-203ENST00000448878 DRP2Q13474 957 aa20.3■□□□□ 0.84
CHCHD3-203ENST00000448878 ADCK5Q3MIX3 580 aa20.3■□□□□ 0.84
CHCHD3-203ENST00000448878 CCDC149Q6ZUS6 474 aa20.3■□□□□ 0.84
CHCHD3-203ENST00000448878 PPFIBP1Q86W92 1011 aa20.3■□□□□ 0.84
CHCHD3-203ENST00000448878 ADSSL1Q8N142 457 aa20.3■□□□□ 0.84
CHCHD3-203ENST00000448878 SLC22A17Q8WUG5 538 aa20.3■□□□□ 0.84
CHCHD3-203ENST00000448878 CCDC136Q96JN2 1154 aa20.3■□□□□ 0.84
CHCHD3-203ENST00000448878 SH2D3AQ9BRG2 576 aa20.3■□□□□ 0.84
CHCHD3-203ENST00000448878 FDXACB1Q9BRP7 624 aaPredicted RBP20.3■□□□□ 0.84
CHCHD3-203ENST00000448878 TEKT3Q9BXF9 490 aa20.3■□□□□ 0.84
CHCHD3-203ENST00000448878 NRDE2Q9H7Z3 1164 aa20.3■□□□□ 0.84
CHCHD3-203ENST00000448878 ESYT2A0FGR8 921 aa20.29■□□□□ 0.84
CHCHD3-203ENST00000448878 GALTP07902 379 aa20.29■□□□□ 0.84
CHCHD3-203ENST00000448878 SFNP31947 248 aa20.29■□□□□ 0.84
CHCHD3-203ENST00000448878 CDC42EP1Q00587 391 aa20.29■□□□□ 0.84
CHCHD3-203ENST00000448878 NOMO2Q5JPE7 1267 aa20.29■□□□□ 0.84
CHCHD3-203ENST00000448878 LRCH2Q5VUJ6 765 aa20.29■□□□□ 0.84
CHCHD3-203ENST00000448878 OTOP3Q7RTS5 596 aa20.29■□□□□ 0.84
CHCHD3-203ENST00000448878 FEZF2Q8TBJ5 459 aa20.29■□□□□ 0.84
CHCHD3-203ENST00000448878 BICD2Q8TD16 824 aa20.29■□□□□ 0.84
CHCHD3-203ENST00000448878 EMILIN2Q9BXX0 1053 aa20.29■□□□□ 0.84
CHCHD3-203ENST00000448878 INO80BQ9C086 356 aaPredicted RBP20.29■□□□□ 0.84
CHCHD3-203ENST00000448878 TBC1D13Q9NVG8 400 aa20.29■□□□□ 0.84
CHCHD3-203ENST00000448878 CARNS1A5YM72 827 aa20.28■□□□□ 0.84
CHCHD3-203ENST00000448878 MSH4O15457 936 aa20.28■□□□□ 0.84
CHCHD3-203ENST00000448878 PI15O43692 258 aa20.28■□□□□ 0.84
CHCHD3-203ENST00000448878 RFX1P22670 979 aa20.28■□□□□ 0.84
CHCHD3-203ENST00000448878 CIITAP33076 1130 aa20.28■□□□□ 0.84
CHCHD3-203ENST00000448878 JAK3P52333 1124 aa20.28■□□□□ 0.84
CHCHD3-203ENST00000448878 TDGQ13569 410 aa20.28■□□□□ 0.84
CHCHD3-203ENST00000448878 CATSPER4Q7RTX7 472 aa20.28■□□□□ 0.84
CHCHD3-203ENST00000448878 MIER3Q7Z3K6 550 aa20.28■□□□□ 0.84
CHCHD3-203ENST00000448878 RHPN2Q8IUC4 686 aa20.28■□□□□ 0.84
CHCHD3-203ENST00000448878 GJA10Q969M2 543 aa20.28■□□□□ 0.84
CHCHD3-203ENST00000448878 UNC45AQ9H3U1 944 aa20.28■□□□□ 0.84
CHCHD3-203ENST00000448878 SFXN1Q9H9B4 322 aa20.28■□□□□ 0.84
CHCHD3-203ENST00000448878 FAM105AQ9NUU6 356 aa20.28■□□□□ 0.84
CHCHD3-203ENST00000448878 DNAJB4Q9UDY4 337 aa20.28■□□□□ 0.84
CHCHD3-203ENST00000448878 IRAK3Q9Y616 596 aa20.28■□□□□ 0.84
CHCHD3-203ENST00000448878 TMEM150BA6NC51 233 aa20.27■□□□□ 0.84
CHCHD3-203ENST00000448878 MEIS3P2A8K0S8 358 aa20.27■□□□□ 0.84
CHCHD3-203ENST00000448878 ID4P47928 161 aa20.27■□□□□ 0.84
CHCHD3-203ENST00000448878 SLC11A1P49279 550 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms