RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 ELAC1Q9H777 363 aaKnown RBP14.2□□□□□ -0.14
PRPF40A-203ENST00000448428 ATP6V0A4Q9HBG4 840 aa14.2□□□□□ -0.14
PRPF40A-203ENST00000448428 CHST12Q9NRB3 414 aa14.2□□□□□ -0.14
PRPF40A-203ENST00000448428 RNF216Q9NWF9 866 aaPredicted RBP14.2□□□□□ -0.14
PRPF40A-203ENST00000448428 TMEM161AQ9NX61 479 aa14.2□□□□□ -0.14
PRPF40A-203ENST00000448428 LRWD1Q9UFC0 647 aa14.2□□□□□ -0.14
PRPF40A-203ENST00000448428 MRPL42Q9Y6G3 142 aaKnown RBP14.2□□□□□ -0.14
PRPF40A-203ENST00000448428 C5orf67F2Z3F1 127 aa14.19□□□□□ -0.14
PRPF40A-203ENST00000448428 ASAP2O43150 1006 aa14.19□□□□□ -0.14
PRPF40A-203ENST00000448428 DGAT1O75907 488 aa14.19□□□□□ -0.14
PRPF40A-203ENST00000448428 SFPQP23246 707 aaKnown RBP eCLIP14.19□□□□□ -0.14
PRPF40A-203ENST00000448428 CTNNB1P35222 781 aa14.19□□□□□ -0.14
PRPF40A-203ENST00000448428 ECM1Q16610 540 aa14.19□□□□□ -0.14
PRPF40A-203ENST00000448428 POTEGQ6S5H5 508 aa14.19□□□□□ -0.14
PRPF40A-203ENST00000448428 ECHDC2Q86YB7 292 aa14.19□□□□□ -0.14
PRPF40A-203ENST00000448428 IGSF22Q8N9C0 903 aa14.19□□□□□ -0.14
PRPF40A-203ENST00000448428 MINDY3Q9H8M7 445 aa14.19□□□□□ -0.14
PRPF40A-203ENST00000448428 DBR1Q9UK59 544 aaKnown RBP14.19□□□□□ -0.14
PRPF40A-203ENST00000448428 RWDD3Q9Y3V2 267 aa14.19□□□□□ -0.14
PRPF40A-203ENST00000448428 A0A0U1RQF3 1178 aa14.18□□□□□ -0.14
PRPF40A-203ENST00000448428 TBKBP1A7MCY6 615 aa14.18□□□□□ -0.14
PRPF40A-203ENST00000448428 LAD1O00515 517 aa14.18□□□□□ -0.14
PRPF40A-203ENST00000448428 RB1P06400 928 aa14.18□□□□□ -0.14
PRPF40A-203ENST00000448428 FGFR1P11362 822 aa14.18□□□□□ -0.14
PRPF40A-203ENST00000448428 ARL2P36404 184 aa14.18□□□□□ -0.14
PRPF40A-203ENST00000448428 CCT6AP40227 531 aaKnown RBP14.18□□□□□ -0.14
PRPF40A-203ENST00000448428 PRPHP41219 470 aa14.18□□□□□ -0.14
PRPF40A-203ENST00000448428 MXD4Q14582 209 aaPredicted RBP14.18□□□□□ -0.14
PRPF40A-203ENST00000448428 CATSPER4Q7RTX7 472 aa14.18□□□□□ -0.14
PRPF40A-203ENST00000448428 SRGAP1Q7Z6B7 1085 aa14.18□□□□□ -0.14
PRPF40A-203ENST00000448428 RNF149Q8NC42 400 aa14.18□□□□□ -0.14
PRPF40A-203ENST00000448428 CCDC43Q96MW1 224 aaKnown RBP14.18□□□□□ -0.14
PRPF40A-203ENST00000448428 RNF19AQ9NV58 838 aa14.18□□□□□ -0.14
PRPF40A-203ENST00000448428 DACT1Q9NYF0 836 aa14.18□□□□□ -0.14
PRPF40A-203ENST00000448428 ATG2AQ2TAZ0 1938 aa14.17□□□□□ -0.14
PRPF40A-203ENST00000448428 TRANK1O15050 2925 aa14.17□□□□□ -0.14
PRPF40A-203ENST00000448428 PP2D1A8MPX8 630 aa14.17□□□□□ -0.14
PRPF40A-203ENST00000448428 USO1O60763 962 aaKnown RBP14.17□□□□□ -0.14
PRPF40A-203ENST00000448428 EOMESO95936 686 aa14.17□□□□□ -0.14
PRPF40A-203ENST00000448428 MUTP22033 750 aa14.17□□□□□ -0.14
PRPF40A-203ENST00000448428 ATP2C1P98194 919 aaPredicted RBP14.17□□□□□ -0.14
PRPF40A-203ENST00000448428 DTHD1Q6ZMT9 781 aa14.17□□□□□ -0.14
PRPF40A-203ENST00000448428 MAEAQ7L5Y9 396 aa14.17□□□□□ -0.14
PRPF40A-203ENST00000448428 ZNF598Q86UK7 904 aaKnown RBP14.17□□□□□ -0.14
PRPF40A-203ENST00000448428 RNF169Q8NCN4 708 aa14.17□□□□□ -0.14
PRPF40A-203ENST00000448428 ASAP3Q8TDY4 903 aa14.17□□□□□ -0.14
PRPF40A-203ENST00000448428 MRPL38Q96DV4 380 aaKnown RBP14.17□□□□□ -0.14
PRPF40A-203ENST00000448428 C11orf84Q9BUA3 381 aaPredicted RBP14.17□□□□□ -0.14
PRPF40A-203ENST00000448428 TRAIPQ9BWF2 469 aa14.17□□□□□ -0.14
PRPF40A-203ENST00000448428 PLVAPQ9BX97 442 aa14.17□□□□□ -0.14
PRPF40A-203ENST00000448428 PIN4Q9Y237 131 aaKnown RBP14.17□□□□□ -0.14
PRPF40A-203ENST00000448428 PRUNE2Q8WUY3 3088 aa14.17□□□□□ -0.14
PRPF40A-203ENST00000448428 K7ELQ4 463 aaPredicted RBP14.16□□□□□ -0.14
PRPF40A-203ENST00000448428 GRM6O15303 877 aa14.16□□□□□ -0.14
PRPF40A-203ENST00000448428 ATF7P17544 494 aaPredicted RBP14.16□□□□□ -0.14
PRPF40A-203ENST00000448428 GLRA2P23416 452 aa14.16□□□□□ -0.14
PRPF40A-203ENST00000448428 CDC25AP30304 524 aa14.16□□□□□ -0.14
PRPF40A-203ENST00000448428 HOXA11P31270 313 aaPredicted RBP14.16□□□□□ -0.14
PRPF40A-203ENST00000448428 PHKA2P46019 1235 aa14.16□□□□□ -0.14
PRPF40A-203ENST00000448428 PTENP60484 403 aa14.16□□□□□ -0.14
PRPF40A-203ENST00000448428 POU5F1BQ06416 359 aa14.16□□□□□ -0.14
PRPF40A-203ENST00000448428 TFDP1Q14186 410 aa14.16□□□□□ -0.14
PRPF40A-203ENST00000448428 SKIV2LQ15477 1246 aaKnown RBP14.16□□□□□ -0.14
PRPF40A-203ENST00000448428 PTPROQ16827 1216 aa14.16□□□□□ -0.14
PRPF40A-203ENST00000448428 HAUS3Q68CZ6 603 aa14.16□□□□□ -0.14
PRPF40A-203ENST00000448428 TWF2Q6IBS0 349 aaKnown RBP14.16□□□□□ -0.14
PRPF40A-203ENST00000448428 PADI6Q6TGC4 694 aa14.16□□□□□ -0.14
PRPF40A-203ENST00000448428 INTS4Q96HW7 963 aaKnown RBP14.16□□□□□ -0.14
PRPF40A-203ENST00000448428 CASD1Q96PB1 797 aa14.16□□□□□ -0.14
PRPF40A-203ENST00000448428 RAB34Q9BZG1 259 aa14.16□□□□□ -0.14
PRPF40A-203ENST00000448428 TMEM117Q9H0C3 514 aa14.16□□□□□ -0.14
PRPF40A-203ENST00000448428 POLR3FQ9H1D9 316 aaPredicted RBP14.16□□□□□ -0.14
PRPF40A-203ENST00000448428 ALG13Q9NP73 1137 aaKnown RBP14.16□□□□□ -0.14
PRPF40A-203ENST00000448428 GPRC5CQ9NQ84 441 aa14.16□□□□□ -0.14
PRPF40A-203ENST00000448428 AGPAT5Q9NUQ2 364 aa14.16□□□□□ -0.14
PRPF40A-203ENST00000448428 TYW1Q9NV66 732 aaKnown RBP14.16□□□□□ -0.14
PRPF40A-203ENST00000448428 HCSTQ9UBK5 93 aa14.16□□□□□ -0.14
PRPF40A-203ENST00000448428 PLAGL2Q9UPG8 496 aa14.16□□□□□ -0.14
PRPF40A-203ENST00000448428 KIAA1024Q9UPX6 916 aa14.16□□□□□ -0.14
PRPF40A-203ENST00000448428 STK24Q9Y6E0 443 aa14.16□□□□□ -0.14
PRPF40A-203ENST00000448428 PLXNA4Q9HCM2 1894 aa14.16□□□□□ -0.14
PRPF40A-203ENST00000448428 VPS37CA5D8V6 355 aaPredicted RBP14.15□□□□□ -0.14
PRPF40A-203ENST00000448428 ARHGEF35A5YM69 484 aa14.15□□□□□ -0.14
PRPF40A-203ENST00000448428 HOXA2O43364 376 aa14.15□□□□□ -0.14
PRPF40A-203ENST00000448428 PDCP20941 246 aa14.15□□□□□ -0.14
PRPF40A-203ENST00000448428 CAPSQ13938 189 aa14.15□□□□□ -0.14
PRPF40A-203ENST00000448428 NAALADL2Q58DX5 795 aa14.15□□□□□ -0.14
PRPF40A-203ENST00000448428 CLLU1OSQ5K130 101 aa14.15□□□□□ -0.14
PRPF40A-203ENST00000448428 LRRC55Q6ZSA7 311 aa14.15□□□□□ -0.14
PRPF40A-203ENST00000448428 BRAPQ7Z569 592 aa14.15□□□□□ -0.14
PRPF40A-203ENST00000448428 IFNLR1Q8IU57 520 aaPredicted RBP14.15□□□□□ -0.14
PRPF40A-203ENST00000448428 KLHL23Q8NBE8 558 aa14.15□□□□□ -0.14
PRPF40A-203ENST00000448428 MCPH1Q8NEM0 835 aa14.15□□□□□ -0.14
PRPF40A-203ENST00000448428 SNX29Q8TEQ0 813 aa14.15□□□□□ -0.14
PRPF40A-203ENST00000448428 ATXN2LQ8WWM7 1075 aaKnown RBP14.15□□□□□ -0.14
PRPF40A-203ENST00000448428 P2RX5Q93086 422 aa14.15□□□□□ -0.14
PRPF40A-203ENST00000448428 MMTAG2Q9BU76 263 aaKnown RBP14.15□□□□□ -0.14
PRPF40A-203ENST00000448428 CWH43Q9H720 699 aa14.15□□□□□ -0.14
PRPF40A-203ENST00000448428 FOXD4L1Q9NU39 408 aa14.15□□□□□ -0.14
PRPF40A-203ENST00000448428 FAM105AQ9NUU6 356 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms