RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 NR0B2Q15466 257 aa7.27□□□□□ -1.25
USP49-205ENST00000448078 CCDC57Q2TAC2 916 aa7.27□□□□□ -1.25
USP49-205ENST00000448078 CAVIN4Q5BKX8 364 aa7.27□□□□□ -1.25
USP49-205ENST00000448078 SYDE1Q6ZW31 735 aaPredicted RBP7.27□□□□□ -1.25
USP49-205ENST00000448078 UBE3BQ7Z3V4 1068 aa7.27□□□□□ -1.25
USP49-205ENST00000448078 MCF2L2Q86YR7 1114 aa7.27□□□□□ -1.25
USP49-205ENST00000448078 CERS5Q8N5B7 392 aa7.27□□□□□ -1.25
USP49-205ENST00000448078 FBXO15Q8NCQ5 510 aaPredicted RBP7.27□□□□□ -1.25
USP49-205ENST00000448078 ZKSCAN4Q969J2 545 aaPredicted RBP7.27□□□□□ -1.25
USP49-205ENST00000448078 FAM122AQ96E09 287 aa7.27□□□□□ -1.25
USP49-205ENST00000448078 INTS4Q96HW7 963 aaKnown RBP7.27□□□□□ -1.25
USP49-205ENST00000448078 MRIQ9BWK5 157 aa7.27□□□□□ -1.25
USP49-205ENST00000448078 C11orf49Q9H6J7 331 aa7.27□□□□□ -1.25
USP49-205ENST00000448078 CNNM1Q9NRU3 951 aa7.27□□□□□ -1.25
USP49-205ENST00000448078 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.27□□□□□ -1.25
USP49-205ENST00000448078 CGGBP1Q9UFW8 167 aaPredicted RBP7.27□□□□□ -1.25
USP49-205ENST00000448078 EBF1Q9UH73 591 aa7.27□□□□□ -1.25
USP49-205ENST00000448078 YBX2Q9Y2T7 364 aaKnown RBP7.27□□□□□ -1.25
USP49-205ENST00000448078 ADGRA2Q96PE1 1338 aa7.27□□□□□ -1.25
USP49-205ENST00000448078 SCN9AQ15858 1988 aa7.26□□□□□ -1.25
USP49-205ENST00000448078 TAF1P21675 1872 aa7.26□□□□□ -1.25
USP49-205ENST00000448078 HTTP42858 3142 aa7.26□□□□□ -1.25
USP49-205ENST00000448078 PI4KAP2A4QPH2 592 aa7.26□□□□□ -1.25
USP49-205ENST00000448078 OR14I1A6ND48 311 aa7.26□□□□□ -1.25
USP49-205ENST00000448078 B2RBV5 119 aa7.26□□□□□ -1.25
USP49-205ENST00000448078 ELL2O00472 640 aaPredicted RBP7.26□□□□□ -1.25
USP49-205ENST00000448078 TAF5LO75529 589 aa7.26□□□□□ -1.25
USP49-205ENST00000448078 FGRP09769 529 aa7.26□□□□□ -1.25
USP49-205ENST00000448078 TMEM253P0C7T8 217 aa7.26□□□□□ -1.25
USP49-205ENST00000448078 ZEB1P37275 1124 aaPredicted RBP7.26□□□□□ -1.25
USP49-205ENST00000448078 CYP4F8P98187 520 aa7.26□□□□□ -1.25
USP49-205ENST00000448078 KRT24Q2M2I5 525 aa7.26□□□□□ -1.25
USP49-205ENST00000448078 HSF5Q4G112 596 aaPredicted RBP7.26□□□□□ -1.25
USP49-205ENST00000448078 LDHAL6AQ6ZMR3 332 aa7.26□□□□□ -1.25
USP49-205ENST00000448078 ANKS3Q6ZW76 656 aa7.26□□□□□ -1.25
USP49-205ENST00000448078 CCAR1Q8IX12 1150 aaKnown RBP7.26□□□□□ -1.25
USP49-205ENST00000448078 PI4KAP1Q8N8J0 262 aa7.26□□□□□ -1.25
USP49-205ENST00000448078 SLC43A3Q8NBI5 491 aa7.26□□□□□ -1.25
USP49-205ENST00000448078 BVESQ8NE79 360 aa7.26□□□□□ -1.25
USP49-205ENST00000448078 HNRNPLLQ8WVV9 542 aaKnown RBP7.26□□□□□ -1.25
USP49-205ENST00000448078 RUNDC1Q96C34 613 aa7.26□□□□□ -1.25
USP49-205ENST00000448078 TEPSINQ96N21 525 aa7.26□□□□□ -1.25
USP49-205ENST00000448078 FCRL3Q96P31 734 aaPredicted RBP7.26□□□□□ -1.25
USP49-205ENST00000448078 PPP1R16BQ96T49 567 aa7.26□□□□□ -1.25
USP49-205ENST00000448078 G6PC3Q9BUM1 346 aa7.26□□□□□ -1.25
USP49-205ENST00000448078 SZT2Q5T011 3432 aa7.26□□□□□ -1.25
USP49-205ENST00000448078 COL6A3P12111 3177 aa7.26□□□□□ -1.25
USP49-205ENST00000448078 MAST3O60307 1309 aa7.26□□□□□ -1.25
USP49-205ENST00000448078 RANBP2P49792 3224 aaKnown RBP7.25□□□□□ -1.25
USP49-205ENST00000448078 A0A1W2PQ45 241 aaPredicted RBP7.25□□□□□ -1.25
USP49-205ENST00000448078 A0A1W2PQY0 241 aa7.25□□□□□ -1.25
USP49-205ENST00000448078 NFIBO00712 420 aa7.25□□□□□ -1.25
USP49-205ENST00000448078 SYN1P17600 705 aa7.25□□□□□ -1.25
USP49-205ENST00000448078 ATP2B1P20020 1258 aa7.25□□□□□ -1.25
USP49-205ENST00000448078 PABPC4Q13310 644 aaKnown RBP eCLIP7.25□□□□□ -1.25
USP49-205ENST00000448078 UBE4AQ14139 1066 aa7.25□□□□□ -1.25
USP49-205ENST00000448078 RTP2Q5QGT7 225 aa7.25□□□□□ -1.25
USP49-205ENST00000448078 MIGA2Q7L4E1 593 aa7.25□□□□□ -1.25
USP49-205ENST00000448078 CKAP2LQ8IYA6 745 aa7.25□□□□□ -1.25
USP49-205ENST00000448078 KCNN1Q92952 543 aa7.25□□□□□ -1.25
USP49-205ENST00000448078 PLA2G12BQ9BX93 195 aa7.25□□□□□ -1.25
USP49-205ENST00000448078 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.25□□□□□ -1.25
USP49-205ENST00000448078 IMPACTQ9P2X3 320 aa7.25□□□□□ -1.25
USP49-205ENST00000448078 JAG2Q9Y219 1238 aa7.25□□□□□ -1.25
USP49-205ENST00000448078 SLC45A1Q9Y2W3 748 aa7.25□□□□□ -1.25
USP49-205ENST00000448078 BACE2Q9Y5Z0 518 aa7.25□□□□□ -1.25
USP49-205ENST00000448078 LAMB2P55268 1798 aa7.25□□□□□ -1.25
USP49-205ENST00000448078 C2orf71A6NGG8 1288 aa7.24□□□□□ -1.25
USP49-205ENST00000448078 FADS2P1A8MWK0 482 aa7.24□□□□□ -1.25
USP49-205ENST00000448078 HMGCRP04035 888 aa7.24□□□□□ -1.25
USP49-205ENST00000448078 CSF1RP07333 972 aa7.24□□□□□ -1.25
USP49-205ENST00000448078 SDHBP21912 280 aa7.24□□□□□ -1.25
USP49-205ENST00000448078 KLRK1P26718 216 aa7.24□□□□□ -1.25
USP49-205ENST00000448078 GCLCP48506 637 aaPredicted RBP7.24□□□□□ -1.25
USP49-205ENST00000448078 ZNF143P52747 638 aaPredicted RBP7.24□□□□□ -1.25
USP49-205ENST00000448078 GCKRQ14397 625 aa7.24□□□□□ -1.25
USP49-205ENST00000448078 RALBP1Q15311 655 aa7.24□□□□□ -1.25
USP49-205ENST00000448078 ZNF124Q15973 351 aa7.24□□□□□ -1.25
USP49-205ENST00000448078 EEF1DP3Q658K8 133 aa7.24□□□□□ -1.25
USP49-205ENST00000448078 OLFML2BQ68BL8 750 aa7.24□□□□□ -1.25
USP49-205ENST00000448078 GADL1Q6ZQY3 521 aa7.24□□□□□ -1.25
USP49-205ENST00000448078 EEPD1Q7L9B9 569 aa7.24□□□□□ -1.25
USP49-205ENST00000448078 IRF2BP1Q8IU81 584 aa7.24□□□□□ -1.25
USP49-205ENST00000448078 POU5F2Q8N7G0 328 aa7.24□□□□□ -1.25
USP49-205ENST00000448078 TDRD7Q8NHU6 1098 aaKnown RBP7.24□□□□□ -1.25
USP49-205ENST00000448078 MAFAQ8NHW3 353 aaPredicted RBP7.24□□□□□ -1.25
USP49-205ENST00000448078 USP33Q8TEY7 942 aa7.24□□□□□ -1.25
USP49-205ENST00000448078 PTCHD1Q96NR3 888 aa7.24□□□□□ -1.25
USP49-205ENST00000448078 KCNK12Q9HB15 430 aa7.24□□□□□ -1.25
USP49-205ENST00000448078 APEX2Q9UBZ4 518 aa7.24□□□□□ -1.25
USP49-205ENST00000448078 DBR1Q9UK59 544 aaKnown RBP7.24□□□□□ -1.25
USP49-205ENST00000448078 GABRQQ9UN88 632 aa7.24□□□□□ -1.25
USP49-205ENST00000448078 PCDHAC2Q9Y5I4 1007 aa7.24□□□□□ -1.25
USP49-205ENST00000448078 LRRFIP2Q9Y608 721 aaKnown RBP7.24□□□□□ -1.25
USP49-205ENST00000448078 KDM3BQ7LBC6 1761 aa7.23□□□□□ -1.25
USP49-205ENST00000448078 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.23□□□□□ -1.25
USP49-205ENST00000448078 MPOP05164 745 aa7.23□□□□□ -1.25
USP49-205ENST00000448078 CYP2C8P10632 490 aa7.23□□□□□ -1.25
USP49-205ENST00000448078 GTF2F1P35269 517 aaKnown RBP eCLIP7.23□□□□□ -1.25
USP49-205ENST00000448078 KCNJ6P48051 423 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms