RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 CACNB2Q08289 660 aaPredicted RBP6.49□□□□□ -1.37
PROM1-201ENST00000447510 TBC1D8BQ0IIM8 1120 aa6.49□□□□□ -1.37
PROM1-201ENST00000447510 PDCLQ13371 301 aa6.49□□□□□ -1.37
PROM1-201ENST00000447510 PDIA5Q14554 519 aa6.49□□□□□ -1.37
PROM1-201ENST00000447510 FSCN1Q16658 493 aaKnown RBP6.49□□□□□ -1.37
PROM1-201ENST00000447510 OLFML2BQ68BL8 750 aa6.49□□□□□ -1.37
PROM1-201ENST00000447510 POTEGQ6S5H5 508 aa6.49□□□□□ -1.37
PROM1-201ENST00000447510 POTEEQ6S8J3 1075 aa6.49□□□□□ -1.37
PROM1-201ENST00000447510 DYMQ7RTS9 669 aa6.49□□□□□ -1.37
PROM1-201ENST00000447510 GPBP1Q86WP2 473 aa6.49□□□□□ -1.37
PROM1-201ENST00000447510 NOA1Q8NC60 698 aaKnown RBP6.49□□□□□ -1.37
PROM1-201ENST00000447510 LENG1Q96BZ8 264 aaPredicted RBP6.49□□□□□ -1.37
PROM1-201ENST00000447510 MIEF2Q96C03 454 aa6.49□□□□□ -1.37
PROM1-201ENST00000447510 FAM167AQ96KS9 214 aa6.49□□□□□ -1.37
PROM1-201ENST00000447510 SENP7Q9BQF6 1050 aa6.49□□□□□ -1.37
PROM1-201ENST00000447510 MRPL44Q9H9J2 332 aaKnown RBP6.49□□□□□ -1.37
PROM1-201ENST00000447510 SERTAD1Q9UHV2 236 aa6.49□□□□□ -1.37
PROM1-201ENST00000447510 GUCA1BQ9UMX6 200 aa6.49□□□□□ -1.37
PROM1-201ENST00000447510 DNAJC25-GNG10A0A024R161 153 aa6.49□□□□□ -1.37
PROM1-201ENST00000447510 CYP3A7-CYP3A51PA0A087WV96 503 aa6.49□□□□□ -1.37
PROM1-201ENST00000447510 A0A0U1RQJ8 604 aa6.49□□□□□ -1.37
PROM1-201ENST00000447510 GOLGA6L7A0A1B0GV03 622 aa6.49□□□□□ -1.37
PROM1-201ENST00000447510 WNT7AO00755 349 aa6.49□□□□□ -1.37
PROM1-201ENST00000447510 SEPT4O43236 478 aa6.49□□□□□ -1.37
PROM1-201ENST00000447510 SNAI1O95863 264 aaPredicted RBP6.49□□□□□ -1.37
PROM1-201ENST00000447510 HOXC6P09630 235 aa6.49□□□□□ -1.37
PROM1-201ENST00000447510 PLCG1P19174 1290 aa6.49□□□□□ -1.37
PROM1-201ENST00000447510 CYP3A7P24462 503 aa6.49□□□□□ -1.37
PROM1-201ENST00000447510 DUSP28Q4G0W2 176 aa6.49□□□□□ -1.37
PROM1-201ENST00000447510 CELF3Q5SZQ8 465 aaKnown RBP6.49□□□□□ -1.37
PROM1-201ENST00000447510 FAM102BQ5T8I3 360 aa6.49□□□□□ -1.37
PROM1-201ENST00000447510 PCSK9Q8NBP7 692 aaKnown RBP6.49□□□□□ -1.37
PROM1-201ENST00000447510 SLC7A3Q8WY07 619 aa6.49□□□□□ -1.37
PROM1-201ENST00000447510 SLC5A5Q92911 643 aa6.49□□□□□ -1.37
PROM1-201ENST00000447510 SH2D3AQ9BRG2 576 aa6.49□□□□□ -1.37
PROM1-201ENST00000447510 BHMT2Q9H2M3 363 aa6.49□□□□□ -1.37
PROM1-201ENST00000447510 FBXO2Q9UK22 296 aaPredicted RBP6.49□□□□□ -1.37
PROM1-201ENST00000447510 GJD2Q9UKL4 321 aa6.49□□□□□ -1.37
PROM1-201ENST00000447510 GOLGA6BA6NDN3 693 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 CCDC169A6NNP5 214 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 CHUKO15111 745 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 TMOD1P28289 359 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 TRIM32Q13049 653 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 IFT88Q13099 833 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 ARMC3Q5W041 872 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 NEK9Q8TD19 979 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 IFT74Q96LB3 600 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 FAM49AQ9H0Q0 323 aaPredicted RBP6.48□□□□□ -1.37
PROM1-201ENST00000447510 EXOC1Q9NV70 894 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 MYH6P13533 1939 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 RPTORQ8N122 1335 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 A0A1W2PQ27 194 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 A0A1W2PQ64 194 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 A0A1W2PQD8 194 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 E9PMD0 336 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 M0R2N6 131 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 SUPT20HL2P0C7V6 817 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 ZNF286BP0CG31 522 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 HSPA8P11142 646 aaKnown RBP6.48□□□□□ -1.37
PROM1-201ENST00000447510 SMPD1P17405 629 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 FXR2P51116 673 aaKnown RBP eCLIP6.48□□□□□ -1.37
PROM1-201ENST00000447510 STX17P56962 302 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 NLRP12P59046 1061 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 GRIN1Q05586 938 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 ITGB3BPQ13352 177 aaPredicted RBP6.48□□□□□ -1.37
PROM1-201ENST00000447510 PNOCQ13519 176 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 PTPAQ15257 358 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 FBXO46Q6PJ61 603 aaPredicted RBP6.48□□□□□ -1.37
PROM1-201ENST00000447510 MICAL1Q8TDZ2 1067 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 LARP4BQ92615 738 aaKnown RBP6.48□□□□□ -1.37
PROM1-201ENST00000447510 ERAP1Q9NZ08 941 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 PTPN22Q9Y2R2 807 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.48□□□□□ -1.37
PROM1-201ENST00000447510 CCDC189A1A4V9 331 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 M0QZ92 97 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 CCND3P30281 292 aaPredicted RBP6.48□□□□□ -1.37
PROM1-201ENST00000447510 IRAK1P51617 712 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 IRF5Q13568 498 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 PKN2Q16513 984 aaKnown RBP6.48□□□□□ -1.37
PROM1-201ENST00000447510 USP49Q70CQ1 688 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 SND1Q7KZF4 910 aaKnown RBP eCLIP6.48□□□□□ -1.37
PROM1-201ENST00000447510 TRIM50Q86XT4 487 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 CCDC65Q8IXS2 484 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 RETREG2Q8NC44 543 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 RDM1Q8NG50 284 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 PXYLP1Q8TE99 480 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 HAS1Q92839 578 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 KATNAL1Q9BW62 490 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.48□□□□□ -1.37
PROM1-201ENST00000447510 KCNMB3Q9NPA1 279 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 FLRT1Q9NZU1 646 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 DDX20Q9UHI6 824 aaKnown RBP6.48□□□□□ -1.37
PROM1-201ENST00000447510 ADGRA2Q96PE1 1338 aa6.48□□□□□ -1.37
PROM1-201ENST00000447510 IGLV3-22A0A075B6J6 115 aa6.47□□□□□ -1.37
PROM1-201ENST00000447510 H3BRB1 525 aa6.47□□□□□ -1.37
PROM1-201ENST00000447510 DUSP11O75319 330 aaKnown RBP6.47□□□□□ -1.37
PROM1-201ENST00000447510 PLA2G4BP0C869 781 aa6.47□□□□□ -1.37
PROM1-201ENST00000447510 GNAT1P11488 350 aa6.47□□□□□ -1.37
PROM1-201ENST00000447510 DNA2P51530 1060 aa6.47□□□□□ -1.37
PROM1-201ENST00000447510 ATN1P54259 1190 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms