RNA–Protein interactions for RNA: ENST00000447199.1

SPTLC1P1-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 1, humanhuman

BASIC

Gene SPTLC1P1, Length 261 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P1-201ENST00000447199 DKC1O60832 514 aaKnown RBP eCLIP17.76■□□□□ 0.43
SPTLC1P1-201ENST00000447199 EOMESO95936 686 aa17.76■□□□□ 0.43
SPTLC1P1-201ENST00000447199 LAG3P18627 525 aa17.76■□□□□ 0.43
SPTLC1P1-201ENST00000447199 SMAD2Q15796 467 aaKnown RBP17.76■□□□□ 0.43
SPTLC1P1-201ENST00000447199 CSPP1Q1MSJ5 1256 aa17.76■□□□□ 0.43
SPTLC1P1-201ENST00000447199 SPOUT1Q5T280 376 aaKnown RBP17.76■□□□□ 0.43
SPTLC1P1-201ENST00000447199 RHPN2Q8IUC4 686 aa17.76■□□□□ 0.43
SPTLC1P1-201ENST00000447199 KSR1Q8IVT5 923 aa17.76■□□□□ 0.43
SPTLC1P1-201ENST00000447199 SLFN12Q8IYM2 578 aa17.76■□□□□ 0.43
SPTLC1P1-201ENST00000447199 EFHBQ8N7U6 833 aa17.76■□□□□ 0.43
SPTLC1P1-201ENST00000447199 IGFLR1Q9H665 355 aa17.76■□□□□ 0.43
SPTLC1P1-201ENST00000447199 IFT122Q9HBG6 1241 aa17.76■□□□□ 0.43
SPTLC1P1-201ENST00000447199 BRMS1Q9HCU9 246 aa17.76■□□□□ 0.43
SPTLC1P1-201ENST00000447199 DACT1Q9NYF0 836 aa17.76■□□□□ 0.43
SPTLC1P1-201ENST00000447199 CLEC1BQ9P126 229 aa17.76■□□□□ 0.43
SPTLC1P1-201ENST00000447199 LZTS1Q9Y250 596 aa17.76■□□□□ 0.43
SPTLC1P1-201ENST00000447199 PPME1Q9Y570 386 aa17.76■□□□□ 0.43
SPTLC1P1-201ENST00000447199 C19orf67A6NJJ6 358 aa17.75■□□□□ 0.43
SPTLC1P1-201ENST00000447199 PI4K2BG5E9Z4 385 aa17.75■□□□□ 0.43
SPTLC1P1-201ENST00000447199 FSCN2O14926 492 aa17.75■□□□□ 0.43
SPTLC1P1-201ENST00000447199 GLP2RO95838 553 aa17.75■□□□□ 0.43
SPTLC1P1-201ENST00000447199 COL9A1P20849 921 aa17.75■□□□□ 0.43
SPTLC1P1-201ENST00000447199 ERVFC1P60507 584 aa17.75■□□□□ 0.43
SPTLC1P1-201ENST00000447199 PLCB3Q01970 1234 aa17.75■□□□□ 0.43
SPTLC1P1-201ENST00000447199 ZP2Q05996 745 aa17.75■□□□□ 0.43
SPTLC1P1-201ENST00000447199 DIS3L2Q8IYB7 885 aaKnown RBP17.75■□□□□ 0.43
SPTLC1P1-201ENST00000447199 THNSL1Q8IYQ7 743 aa17.75■□□□□ 0.43
SPTLC1P1-201ENST00000447199 LRRC43Q8N309 656 aa17.75■□□□□ 0.43
SPTLC1P1-201ENST00000447199 PPP2R3CQ969Q6 453 aa17.75■□□□□ 0.43
SPTLC1P1-201ENST00000447199 C11orf16Q9NQ32 467 aa17.75■□□□□ 0.43
SPTLC1P1-201ENST00000447199 TLR9Q9NR96 1032 aa17.75■□□□□ 0.43
SPTLC1P1-201ENST00000447199 PRKAG3Q9UGI9 489 aa17.75■□□□□ 0.43
SPTLC1P1-201ENST00000447199 FAM50BQ9Y247 325 aa17.75■□□□□ 0.43
SPTLC1P1-201ENST00000447199 PLXNA4Q9HCM2 1894 aa17.75■□□□□ 0.43
SPTLC1P1-201ENST00000447199 ZBTB39O15060 712 aa17.74■□□□□ 0.43
SPTLC1P1-201ENST00000447199 MBTPS2O43462 519 aa17.74■□□□□ 0.43
SPTLC1P1-201ENST00000447199 SLITRK3O94933 977 aa17.74■□□□□ 0.43
SPTLC1P1-201ENST00000447199 EYA4O95677 639 aa17.74■□□□□ 0.43
SPTLC1P1-201ENST00000447199 SFPQP23246 707 aaKnown RBP eCLIP17.74■□□□□ 0.43
SPTLC1P1-201ENST00000447199 YWHABP31946 246 aaKnown RBP17.74■□□□□ 0.43
SPTLC1P1-201ENST00000447199 PHKA2P46019 1235 aa17.74■□□□□ 0.43
SPTLC1P1-201ENST00000447199 NRIP1P48552 1158 aa17.74■□□□□ 0.43
SPTLC1P1-201ENST00000447199 SMAD4Q13485 552 aaKnown RBP17.74■□□□□ 0.43
SPTLC1P1-201ENST00000447199 CLUL1Q15846 466 aa17.74■□□□□ 0.43
SPTLC1P1-201ENST00000447199 NCAPH2Q6IBW4 605 aa17.74■□□□□ 0.43
SPTLC1P1-201ENST00000447199 KCNT2Q6UVM3 1135 aa17.74■□□□□ 0.43
SPTLC1P1-201ENST00000447199 SLC7A3Q8WY07 619 aa17.74■□□□□ 0.43
SPTLC1P1-201ENST00000447199 DYDC2Q96IM9 177 aa17.74■□□□□ 0.43
SPTLC1P1-201ENST00000447199 CEP170P1Q96L14 293 aa17.74■□□□□ 0.43
SPTLC1P1-201ENST00000447199 HSD17B14Q9BPX1 270 aa17.74■□□□□ 0.43
SPTLC1P1-201ENST00000447199 INO80BQ9C086 356 aaPredicted RBP17.74■□□□□ 0.43
SPTLC1P1-201ENST00000447199 ZSWIM4Q9H7M6 989 aa17.74■□□□□ 0.43
SPTLC1P1-201ENST00000447199 COL4A3BPQ9Y5P4 624 aa17.74■□□□□ 0.43
SPTLC1P1-201ENST00000447199 BAG4O95429 457 aaKnown RBP17.73■□□□□ 0.43
SPTLC1P1-201ENST00000447199 PBX3P40426 434 aa17.73■□□□□ 0.43
SPTLC1P1-201ENST00000447199 RFC5P40937 340 aa17.73■□□□□ 0.43
SPTLC1P1-201ENST00000447199 POLGP54098 1239 aaPredicted RBP17.73■□□□□ 0.43
SPTLC1P1-201ENST00000447199 CTTNQ14247 550 aaKnown RBP17.73■□□□□ 0.43
SPTLC1P1-201ENST00000447199 PDE12Q6L8Q7 609 aaKnown RBP17.73■□□□□ 0.43
SPTLC1P1-201ENST00000447199 ADHFE1Q8IWW8 467 aa17.73■□□□□ 0.43
SPTLC1P1-201ENST00000447199 EXOC8Q8IYI6 725 aa17.73■□□□□ 0.43
SPTLC1P1-201ENST00000447199 RNF169Q8NCN4 708 aa17.73■□□□□ 0.43
SPTLC1P1-201ENST00000447199 VN1R2Q8NFZ6 395 aa17.73■□□□□ 0.43
SPTLC1P1-201ENST00000447199 HELQQ8TDG4 1101 aa17.73■□□□□ 0.43
SPTLC1P1-201ENST00000447199 PRPF31Q8WWY3 499 aaKnown RBP17.73■□□□□ 0.43
SPTLC1P1-201ENST00000447199 MRPS27Q92552 414 aaKnown RBP17.73■□□□□ 0.43
SPTLC1P1-201ENST00000447199 NLRP4Q96MN2 994 aa17.73■□□□□ 0.43
SPTLC1P1-201ENST00000447199 MTMR9Q96QG7 549 aa17.73■□□□□ 0.43
SPTLC1P1-201ENST00000447199 KIF2CQ99661 725 aa17.73■□□□□ 0.43
SPTLC1P1-201ENST00000447199 CD207Q9UJ71 328 aa17.73■□□□□ 0.43
SPTLC1P1-201ENST00000447199 GAS2O43903 313 aaKnown RBP17.72■□□□□ 0.43
SPTLC1P1-201ENST00000447199 MARCH6O60337 910 aa17.72■□□□□ 0.43
SPTLC1P1-201ENST00000447199 GPR37L1O60883 481 aa17.72■□□□□ 0.43
SPTLC1P1-201ENST00000447199 ZNF623O75123 536 aa17.72■□□□□ 0.43
SPTLC1P1-201ENST00000447199 LYPLA2O95372 231 aa17.72■□□□□ 0.43
SPTLC1P1-201ENST00000447199 NDUFV1P49821 464 aa17.72■□□□□ 0.43
SPTLC1P1-201ENST00000447199 CYP4A11Q02928 519 aa17.72■□□□□ 0.43
SPTLC1P1-201ENST00000447199 LAMTOR4Q0VGL1 99 aa17.72■□□□□ 0.43
SPTLC1P1-201ENST00000447199 COASYQ13057 564 aa17.72■□□□□ 0.43
SPTLC1P1-201ENST00000447199 KCNC3Q14003 757 aa17.72■□□□□ 0.43
SPTLC1P1-201ENST00000447199 RBM23Q86U06 439 aaKnown RBP17.72■□□□□ 0.43
SPTLC1P1-201ENST00000447199 ABI1Q8IZP0 508 aa17.72■□□□□ 0.43
SPTLC1P1-201ENST00000447199 SMRP1Q8NCR6 262 aa17.72■□□□□ 0.43
SPTLC1P1-201ENST00000447199 TMEM143Q96AN5 459 aa17.72■□□□□ 0.43
SPTLC1P1-201ENST00000447199 ZNF558Q96NG5 402 aa17.72■□□□□ 0.43
SPTLC1P1-201ENST00000447199 EIF2AK1Q9BQI3 630 aaKnown RBP17.72■□□□□ 0.43
SPTLC1P1-201ENST00000447199 TLE6Q9H808 572 aa17.72■□□□□ 0.43
SPTLC1P1-201ENST00000447199 MINDY3Q9H8M7 445 aa17.72■□□□□ 0.43
SPTLC1P1-201ENST00000447199 XPNPEP1Q9NQW7 623 aa17.72■□□□□ 0.43
SPTLC1P1-201ENST00000447199 AGPAT5Q9NUQ2 364 aa17.72■□□□□ 0.43
SPTLC1P1-201ENST00000447199 RAPGEFL1Q9UHV5 662 aa17.72■□□□□ 0.43
SPTLC1P1-201ENST00000447199 PCDHA12Q9UN75 941 aa17.72■□□□□ 0.43
SPTLC1P1-201ENST00000447199 LIMCH1Q9UPQ0 1083 aa17.72■□□□□ 0.43
SPTLC1P1-201ENST00000447199 PIN4Q9Y237 131 aaKnown RBP17.72■□□□□ 0.43
SPTLC1P1-201ENST00000447199 MEIS3P2A8K0S8 358 aa17.71■□□□□ 0.43
SPTLC1P1-201ENST00000447199 PER2O15055 1255 aa17.71■□□□□ 0.43
SPTLC1P1-201ENST00000447199 NEMFO60524 1076 aa17.71■□□□□ 0.43
SPTLC1P1-201ENST00000447199 HOXA11P31270 313 aaPredicted RBP17.71■□□□□ 0.43
SPTLC1P1-201ENST00000447199 SSTR3P32745 418 aaPredicted RBP17.71■□□□□ 0.43
SPTLC1P1-201ENST00000447199 PPM1AP35813 382 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms