RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 TBX4P57082 545 aa5.89□□□□□ -1.47
HMGB1P48-201ENST00000446155 ITKQ08881 620 aa5.89□□□□□ -1.47
HMGB1P48-201ENST00000446155 USP10Q14694 798 aaKnown RBP5.89□□□□□ -1.47
HMGB1P48-201ENST00000446155 PCOLCEQ15113 449 aa5.89□□□□□ -1.47
HMGB1P48-201ENST00000446155 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.89□□□□□ -1.47
HMGB1P48-201ENST00000446155 CCDC178Q5BJE1 867 aa5.89□□□□□ -1.47
HMGB1P48-201ENST00000446155 CCDC146Q8IYE0 955 aa5.89□□□□□ -1.47
HMGB1P48-201ENST00000446155 CDYL2Q8N8U2 506 aa5.89□□□□□ -1.47
HMGB1P48-201ENST00000446155 C1orf162Q8NEQ5 155 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P48-201ENST00000446155 TGFBRAP1Q8WUH2 860 aa5.89□□□□□ -1.47
HMGB1P48-201ENST00000446155 DYDC2Q96IM9 177 aa5.89□□□□□ -1.47
HMGB1P48-201ENST00000446155 CCDC136Q96JN2 1154 aa5.89□□□□□ -1.47
HMGB1P48-201ENST00000446155 FDXACB1Q9BRP7 624 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P48-201ENST00000446155 CARD11Q9BXL7 1154 aa5.89□□□□□ -1.47
HMGB1P48-201ENST00000446155 ZNF277Q9NRM2 450 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P48-201ENST00000446155 POLR3BQ9NW08 1133 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P48-201ENST00000446155 SAE1Q9UBE0 346 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P48-201ENST00000446155 PRSS50Q9UI38 385 aa5.89□□□□□ -1.47
HMGB1P48-201ENST00000446155 KCNG1Q9UIX4 513 aa5.89□□□□□ -1.47
HMGB1P48-201ENST00000446155 MAGEL2Q9UJ55 1249 aa5.89□□□□□ -1.47
HMGB1P48-201ENST00000446155 THRAP3Q9Y2W1 955 aaKnown RBP5.89□□□□□ -1.47
HMGB1P48-201ENST00000446155 TNKSO95271 1327 aa5.89□□□□□ -1.47
HMGB1P48-201ENST00000446155 TTBK1Q5TCY1 1321 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P48-201ENST00000446155 KRTAP9-6A0A140TA67 174 aa5.88□□□□□ -1.47
HMGB1P48-201ENST00000446155 MAFGO15525 162 aa5.88□□□□□ -1.47
HMGB1P48-201ENST00000446155 LPLP06858 475 aa5.88□□□□□ -1.47
HMGB1P48-201ENST00000446155 RBP3P10745 1247 aa5.88□□□□□ -1.47
HMGB1P48-201ENST00000446155 STAT5BP51692 787 aa5.88□□□□□ -1.47
HMGB1P48-201ENST00000446155 GJA9P57773 515 aa5.88□□□□□ -1.47
HMGB1P48-201ENST00000446155 KRT85P78386 507 aa5.88□□□□□ -1.47
HMGB1P48-201ENST00000446155 MRPS9P82933 396 aaKnown RBP5.88□□□□□ -1.47
HMGB1P48-201ENST00000446155 UGT8Q16880 541 aa5.88□□□□□ -1.47
HMGB1P48-201ENST00000446155 ABCB5Q2M3G0 1257 aa5.88□□□□□ -1.47
HMGB1P48-201ENST00000446155 NT5DC1Q5TFE4 455 aa5.88□□□□□ -1.47
HMGB1P48-201ENST00000446155 SPOCD1Q6ZMY3 1216 aa5.88□□□□□ -1.47
HMGB1P48-201ENST00000446155 GAREM2Q75VX8 874 aa5.88□□□□□ -1.47
HMGB1P48-201ENST00000446155 GPR155Q7Z3F1 870 aa5.88□□□□□ -1.47
HMGB1P48-201ENST00000446155 CCAR1Q8IX12 1150 aaKnown RBP5.88□□□□□ -1.47
HMGB1P48-201ENST00000446155 MORC4Q8TE76 937 aa5.88□□□□□ -1.47
HMGB1P48-201ENST00000446155 RAX2Q96IS3 184 aa5.88□□□□□ -1.47
HMGB1P48-201ENST00000446155 NOL10Q9BSC4 688 aaKnown RBP5.88□□□□□ -1.47
HMGB1P48-201ENST00000446155 OSBPL6Q9BZF3 934 aa5.88□□□□□ -1.47
HMGB1P48-201ENST00000446155 KIAA1683Q9H0B3 1180 aa5.88□□□□□ -1.47
HMGB1P48-201ENST00000446155 XYLT2Q9H1B5 865 aa5.88□□□□□ -1.47
HMGB1P48-201ENST00000446155 EVLQ9UI08 416 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P48-201ENST00000446155 CTDP1Q9Y5B0 961 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P48-201ENST00000446155 CDY2AQ9Y6F7 541 aa5.88□□□□□ -1.47
HMGB1P48-201ENST00000446155 WASHC2AQ641Q2 1341 aa5.88□□□□□ -1.47
HMGB1P48-201ENST00000446155 ARID1BQ8NFD5 2236 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P48-201ENST00000446155 SRSF2Q01130 221 aaKnown RBP5.87□□□□□ -1.47
HMGB1P48-201ENST00000446155 PPARAQ07869 468 aa5.87□□□□□ -1.47
HMGB1P48-201ENST00000446155 KIAA2012Q0VF49 1180 aa5.87□□□□□ -1.47
HMGB1P48-201ENST00000446155 NFYCQ13952 458 aa5.87□□□□□ -1.47
HMGB1P48-201ENST00000446155 TBR1Q16650 682 aa5.87□□□□□ -1.47
HMGB1P48-201ENST00000446155 AGBL4Q5VU57 503 aa5.87□□□□□ -1.47
HMGB1P48-201ENST00000446155 KLHDC10Q6PID8 442 aa5.87□□□□□ -1.47
HMGB1P48-201ENST00000446155 RALYLQ86SE5 291 aaKnown RBP5.87□□□□□ -1.47
HMGB1P48-201ENST00000446155 CLEC14AQ86T13 490 aa5.87□□□□□ -1.47
HMGB1P48-201ENST00000446155 KBTBD2Q8IY47 623 aa5.87□□□□□ -1.47
HMGB1P48-201ENST00000446155 TSPEARQ8WU66 669 aa5.87□□□□□ -1.47
HMGB1P48-201ENST00000446155 GAB3Q8WWW8 586 aa5.87□□□□□ -1.47
HMGB1P48-201ENST00000446155 HIST1H2AHQ96KK5 128 aa5.87□□□□□ -1.47
HMGB1P48-201ENST00000446155 HIST1H2AJQ99878 128 aa5.87□□□□□ -1.47
HMGB1P48-201ENST00000446155 SLC13A1Q9BZW2 595 aa5.87□□□□□ -1.47
HMGB1P48-201ENST00000446155 GEMIN8Q9NWZ8 242 aaKnown RBP5.87□□□□□ -1.47
HMGB1P48-201ENST00000446155 TCEAL9Q9UHQ7 104 aa5.87□□□□□ -1.47
HMGB1P48-201ENST00000446155 EID1Q9Y6B2 187 aa5.87□□□□□ -1.47
HMGB1P48-201ENST00000446155 SLC4A7Q9Y6M7 1214 aa5.87□□□□□ -1.47
HMGB1P48-201ENST00000446155 PRC1O43663 620 aa5.86□□□□□ -1.47
HMGB1P48-201ENST00000446155 PCDHGA12O60330 932 aa5.86□□□□□ -1.47
HMGB1P48-201ENST00000446155 CNOT4O95628 575 aaKnown RBP5.86□□□□□ -1.47
HMGB1P48-201ENST00000446155 BMP7P18075 431 aa5.86□□□□□ -1.47
HMGB1P48-201ENST00000446155 AGXTP21549 392 aa5.86□□□□□ -1.47
HMGB1P48-201ENST00000446155 MRE11P49959 708 aa5.86□□□□□ -1.47
HMGB1P48-201ENST00000446155 LGALS4P56470 323 aa5.86□□□□□ -1.47
HMGB1P48-201ENST00000446155 SESN2P58004 480 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P48-201ENST00000446155 HGFACQ04756 655 aa5.86□□□□□ -1.47
HMGB1P48-201ENST00000446155 MUM1Q2TAK8 710 aa5.86□□□□□ -1.47
HMGB1P48-201ENST00000446155 TOR2AQ5JU69 321 aa5.86□□□□□ -1.47
HMGB1P48-201ENST00000446155 OR14C36Q8NHC7 312 aa5.86□□□□□ -1.47
HMGB1P48-201ENST00000446155 FEZF2Q8TBJ5 459 aa5.86□□□□□ -1.47
HMGB1P48-201ENST00000446155 FUBP3Q96I24 572 aaKnown RBP eCLIP5.86□□□□□ -1.47
HMGB1P48-201ENST00000446155 FAXDC2Q96IV6 333 aa5.86□□□□□ -1.47
HMGB1P48-201ENST00000446155 C8orf48Q96LL4 319 aa5.86□□□□□ -1.47
HMGB1P48-201ENST00000446155 WDR92Q96MX6 357 aa5.86□□□□□ -1.47
HMGB1P48-201ENST00000446155 OR10A2Q9H208 303 aa5.86□□□□□ -1.47
HMGB1P48-201ENST00000446155 DNAI1Q9UI46 699 aa5.86□□□□□ -1.47
HMGB1P48-201ENST00000446155 USP18Q9UMW8 372 aa5.86□□□□□ -1.47
HMGB1P48-201ENST00000446155 EDARQ9UNE0 448 aa5.86□□□□□ -1.47
HMGB1P48-201ENST00000446155 SPEF1Q9Y4P9 236 aa5.86□□□□□ -1.47
HMGB1P48-201ENST00000446155 PCDHGA9Q9Y5G4 932 aaKnown RBP5.86□□□□□ -1.47
HMGB1P48-201ENST00000446155 PCDHGA8Q9Y5G5 932 aa5.86□□□□□ -1.47
HMGB1P48-201ENST00000446155 PCDHGA7Q9Y5G6 932 aa5.86□□□□□ -1.47
HMGB1P48-201ENST00000446155 PCDHGA6Q9Y5G7 932 aa5.86□□□□□ -1.47
HMGB1P48-201ENST00000446155 PCDHGA3Q9Y5H0 932 aa5.86□□□□□ -1.47
HMGB1P48-201ENST00000446155 PCDHGA2Q9Y5H1 932 aa5.86□□□□□ -1.47
HMGB1P48-201ENST00000446155 DUSP10Q9Y6W6 482 aa5.86□□□□□ -1.47
HMGB1P48-201ENST00000446155 A0A1W2PR48 441 aa5.85□□□□□ -1.47
HMGB1P48-201ENST00000446155 SHTN1A0MZ66 631 aa5.85□□□□□ -1.47
HMGB1P48-201ENST00000446155 C2orf78A6NCI8 922 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms