RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 K7ELQ4 463 aaPredicted RBP20.74■□□□□ 0.91
CCDC188-202ENST00000444532 CSDE1O75534 798 aaKnown RBP20.74■□□□□ 0.91
CCDC188-202ENST00000444532 RB1P06400 928 aa20.74■□□□□ 0.91
CCDC188-202ENST00000444532 SRGAP2CP0DJJ0 459 aa20.74■□□□□ 0.91
CCDC188-202ENST00000444532 FGFR4P22455 802 aa20.74■□□□□ 0.91
CCDC188-202ENST00000444532 DTHD1Q6ZMT9 781 aa20.74■□□□□ 0.91
CCDC188-202ENST00000444532 BRAPQ7Z569 592 aa20.74■□□□□ 0.91
CCDC188-202ENST00000444532 SRGAP1Q7Z6B7 1085 aa20.74■□□□□ 0.91
CCDC188-202ENST00000444532 GDPD5Q8WTR4 605 aa20.74■□□□□ 0.91
CCDC188-202ENST00000444532 PPM1EQ8WY54 764 aa20.74■□□□□ 0.91
CCDC188-202ENST00000444532 BMP2KQ9NSY1 1161 aaPredicted RBP20.74■□□□□ 0.91
CCDC188-202ENST00000444532 A0A087WWV3 80 aa20.73■□□□□ 0.91
CCDC188-202ENST00000444532 C5orf67F2Z3F1 127 aa20.73■□□□□ 0.91
CCDC188-202ENST00000444532 H3BNC9 293 aa20.73■□□□□ 0.91
CCDC188-202ENST00000444532 BMPR1AP36894 532 aa20.73■□□□□ 0.91
CCDC188-202ENST00000444532 CCT6AP40227 531 aaKnown RBP20.73■□□□□ 0.91
CCDC188-202ENST00000444532 POU5F1BQ06416 359 aa20.73■□□□□ 0.91
CCDC188-202ENST00000444532 CCDC85BQ15834 202 aaPredicted RBP20.73■□□□□ 0.91
CCDC188-202ENST00000444532 POTEGQ6S5H5 508 aa20.73■□□□□ 0.91
CCDC188-202ENST00000444532 SNX21Q969T3 373 aa20.73■□□□□ 0.91
CCDC188-202ENST00000444532 FNDC1Q4ZHG4 1894 aaPredicted RBP20.73■□□□□ 0.91
CCDC188-202ENST00000444532 A0A0U1RQF3 1178 aa20.72■□□□□ 0.91
CCDC188-202ENST00000444532 LINC00271P0C7V0 271 aa20.72■□□□□ 0.91
CCDC188-202ENST00000444532 IBSPP21815 317 aaPredicted RBP20.72■□□□□ 0.91
CCDC188-202ENST00000444532 ARL2P36404 184 aa20.72■□□□□ 0.91
CCDC188-202ENST00000444532 ATP2C1P98194 919 aaPredicted RBP20.72■□□□□ 0.91
CCDC188-202ENST00000444532 TFDP1Q14186 410 aa20.72■□□□□ 0.91
CCDC188-202ENST00000444532 CATSPER4Q7RTX7 472 aa20.72■□□□□ 0.91
CCDC188-202ENST00000444532 ECHDC2Q86YB7 292 aa20.72■□□□□ 0.91
CCDC188-202ENST00000444532 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.72■□□□□ 0.91
CCDC188-202ENST00000444532 RNF149Q8NC42 400 aa20.72■□□□□ 0.91
CCDC188-202ENST00000444532 TRAIPQ9BWF2 469 aa20.72■□□□□ 0.91
CCDC188-202ENST00000444532 PLVAPQ9BX97 442 aa20.72■□□□□ 0.91
CCDC188-202ENST00000444532 HOXA2O43364 376 aa20.71■□□□□ 0.91
CCDC188-202ENST00000444532 EOMESO95936 686 aa20.71■□□□□ 0.91
CCDC188-202ENST00000444532 CTNNB1P35222 781 aa20.71■□□□□ 0.91
CCDC188-202ENST00000444532 PHKA2P46019 1235 aa20.71■□□□□ 0.91
CCDC188-202ENST00000444532 GPM6BQ13491 265 aa20.71■□□□□ 0.91
CCDC188-202ENST00000444532 PCBP1Q15365 356 aaKnown RBP eCLIP20.71■□□□□ 0.91
CCDC188-202ENST00000444532 IL17AQ16552 155 aa20.71■□□□□ 0.91
CCDC188-202ENST00000444532 PAN2Q504Q3 1202 aaKnown RBP20.71■□□□□ 0.91
CCDC188-202ENST00000444532 FAM102BQ5T8I3 360 aa20.71■□□□□ 0.91
CCDC188-202ENST00000444532 KRT79Q5XKE5 535 aa20.71■□□□□ 0.91
CCDC188-202ENST00000444532 ARL6IP4Q66PJ3 421 aaKnown RBP20.71■□□□□ 0.91
CCDC188-202ENST00000444532 MICALL1Q8N3F8 863 aa20.71■□□□□ 0.91
CCDC188-202ENST00000444532 MCPH1Q8NEM0 835 aa20.71■□□□□ 0.91
CCDC188-202ENST00000444532 MRPL42Q9Y6G3 142 aaKnown RBP20.71■□□□□ 0.91
CCDC188-202ENST00000444532 EYSQ5T1H1 3165 aa20.71■□□□□ 0.91
CCDC188-202ENST00000444532 PRRC2BQ5JSZ5 2229 aaKnown RBP20.7■□□□□ 0.9
CCDC188-202ENST00000444532 VPS37CA5D8V6 355 aaPredicted RBP20.7■□□□□ 0.9
CCDC188-202ENST00000444532 USO1O60763 962 aaKnown RBP20.7■□□□□ 0.9
CCDC188-202ENST00000444532 SKIP12755 728 aa20.7■□□□□ 0.9
CCDC188-202ENST00000444532 PTENP60484 403 aa20.7■□□□□ 0.9
CCDC188-202ENST00000444532 PTPROQ16827 1216 aa20.7■□□□□ 0.9
CCDC188-202ENST00000444532 IFNLR1Q8IU57 520 aaPredicted RBP20.7■□□□□ 0.9
CCDC188-202ENST00000444532 SNX29Q8TEQ0 813 aa20.7■□□□□ 0.9
CCDC188-202ENST00000444532 MRPL38Q96DV4 380 aaKnown RBP20.7■□□□□ 0.9
CCDC188-202ENST00000444532 C11orf84Q9BUA3 381 aaPredicted RBP20.7■□□□□ 0.9
CCDC188-202ENST00000444532 MINDY3Q9H8M7 445 aa20.7■□□□□ 0.9
CCDC188-202ENST00000444532 AGPAT5Q9NUQ2 364 aa20.7■□□□□ 0.9
CCDC188-202ENST00000444532 KIAA1024Q9UPX6 916 aa20.7■□□□□ 0.9
CCDC188-202ENST00000444532 PIN4Q9Y237 131 aaKnown RBP20.7■□□□□ 0.9
CCDC188-202ENST00000444532 ARHGEF35A5YM69 484 aa20.69■□□□□ 0.9
CCDC188-202ENST00000444532 TBKBP1A7MCY6 615 aa20.69■□□□□ 0.9
CCDC188-202ENST00000444532 BMP15O95972 392 aa20.69■□□□□ 0.9
CCDC188-202ENST00000444532 SYT1P21579 422 aa20.69■□□□□ 0.9
CCDC188-202ENST00000444532 GATMP50440 423 aa20.69■□□□□ 0.9
CCDC188-202ENST00000444532 ECM1Q16610 540 aa20.69■□□□□ 0.9
CCDC188-202ENST00000444532 NAALADL2Q58DX5 795 aa20.69■□□□□ 0.9
CCDC188-202ENST00000444532 TWF2Q6IBS0 349 aaKnown RBP20.69■□□□□ 0.9
CCDC188-202ENST00000444532 P2RX5Q93086 422 aa20.69■□□□□ 0.9
CCDC188-202ENST00000444532 NFKBIZQ9BYH8 718 aa20.69■□□□□ 0.9
CCDC188-202ENST00000444532 TMEM117Q9H0C3 514 aa20.69■□□□□ 0.9
CCDC188-202ENST00000444532 POLR3FQ9H1D9 316 aaPredicted RBP20.69■□□□□ 0.9
CCDC188-202ENST00000444532 KIAA1671Q9BY89 1806 aa20.69■□□□□ 0.9
CCDC188-202ENST00000444532 FGFR1P11362 822 aa20.68■□□□□ 0.9
CCDC188-202ENST00000444532 CYP11B2P19099 503 aa20.68■□□□□ 0.9
CCDC188-202ENST00000444532 GLRA2P23416 452 aa20.68■□□□□ 0.9
CCDC188-202ENST00000444532 PADI6Q6TGC4 694 aa20.68■□□□□ 0.9
CCDC188-202ENST00000444532 ZNF598Q86UK7 904 aaKnown RBP20.68■□□□□ 0.9
CCDC188-202ENST00000444532 ASAP3Q8TDY4 903 aa20.68■□□□□ 0.9
CCDC188-202ENST00000444532 DDX19AQ9NUU7 478 aaKnown RBP20.68■□□□□ 0.9
CCDC188-202ENST00000444532 PP2D1A8MPX8 630 aa20.67■□□□□ 0.9
CCDC188-202ENST00000444532 ZNF623O75123 536 aa20.67■□□□□ 0.9
CCDC188-202ENST00000444532 AXLP30530 894 aa20.67■□□□□ 0.9
CCDC188-202ENST00000444532 RAB27AP51159 221 aa20.67■□□□□ 0.9
CCDC188-202ENST00000444532 NCBP1Q09161 790 aaKnown RBP20.67■□□□□ 0.9
CCDC188-202ENST00000444532 CAPSQ13938 189 aa20.67■□□□□ 0.9
CCDC188-202ENST00000444532 ABI1Q8IZP0 508 aa20.67■□□□□ 0.9
CCDC188-202ENST00000444532 KCTD17Q8N5Z5 321 aa20.67■□□□□ 0.9
CCDC188-202ENST00000444532 RSPH1Q8WYR4 309 aa20.67■□□□□ 0.9
CCDC188-202ENST00000444532 CASD1Q96PB1 797 aa20.67■□□□□ 0.9
CCDC188-202ENST00000444532 MMTAG2Q9BU76 263 aaKnown RBP20.67■□□□□ 0.9
CCDC188-202ENST00000444532 LMAN2LQ9H0V9 348 aa20.67■□□□□ 0.9
CCDC188-202ENST00000444532 BHMT2Q9H2M3 363 aa20.67■□□□□ 0.9
CCDC188-202ENST00000444532 AAASQ9NRG9 546 aa20.67■□□□□ 0.9
CCDC188-202ENST00000444532 RNF19AQ9NV58 838 aa20.67■□□□□ 0.9
CCDC188-202ENST00000444532 DNM3Q9UQ16 869 aa20.67■□□□□ 0.9
CCDC188-202ENST00000444532 PRUNE2Q8WUY3 3088 aa20.67■□□□□ 0.9
CCDC188-202ENST00000444532 VWA3AA6NCI4 1184 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms