RNA–Protein interactions for RNA: ENST00000443780.5

UBE2D4-205, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-205ENST00000443780 ALG13Q9NP73 1137 aaKnown RBP22.78■■□□□ 1.24
UBE2D4-205ENST00000443780 CHST12Q9NRB3 414 aa22.78■■□□□ 1.24
UBE2D4-205ENST00000443780 BMP2KQ9NSY1 1161 aaPredicted RBP22.78■■□□□ 1.24
UBE2D4-205ENST00000443780 ANKEF1Q9NU02 776 aa22.78■■□□□ 1.24
UBE2D4-205ENST00000443780 PLAGL2Q9UPG8 496 aa22.78■■□□□ 1.24
UBE2D4-205ENST00000443780 GAS2O43903 313 aaKnown RBP22.77■■□□□ 1.24
UBE2D4-205ENST00000443780 BMP1P13497 986 aa22.77■■□□□ 1.24
UBE2D4-205ENST00000443780 U2AF2P26368 475 aaKnown RBP eCLIP22.77■■□□□ 1.24
UBE2D4-205ENST00000443780 TRAPPC10P48553 1259 aa22.77■■□□□ 1.24
UBE2D4-205ENST00000443780 KCNQ1P51787 676 aa22.77■■□□□ 1.24
UBE2D4-205ENST00000443780 TTC38Q5R3I4 469 aa22.77■■□□□ 1.24
UBE2D4-205ENST00000443780 TCP11Q8WWU5 503 aa22.77■■□□□ 1.24
UBE2D4-205ENST00000443780 PSPC1Q8WXF1 523 aaKnown RBP22.77■■□□□ 1.24
UBE2D4-205ENST00000443780 NSUN3Q9H649 340 aaKnown RBP22.77■■□□□ 1.24
UBE2D4-205ENST00000443780 IFT122Q9HBG6 1241 aa22.77■■□□□ 1.24
UBE2D4-205ENST00000443780 RNF19AQ9NV58 838 aa22.77■■□□□ 1.24
UBE2D4-205ENST00000443780 DACT1Q9NYF0 836 aa22.77■■□□□ 1.24
UBE2D4-205ENST00000443780 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.76■■□□□ 1.23
UBE2D4-205ENST00000443780 A0A0U1RQF3 1178 aa22.76■■□□□ 1.23
UBE2D4-205ENST00000443780 HOXA2O43364 376 aa22.76■■□□□ 1.23
UBE2D4-205ENST00000443780 ITGB1P05556 798 aa22.76■■□□□ 1.23
UBE2D4-205ENST00000443780 OR52Z1P0C646 297 aa22.76■■□□□ 1.23
UBE2D4-205ENST00000443780 LAMTOR4Q0VGL1 99 aa22.76■■□□□ 1.23
UBE2D4-205ENST00000443780 TCEAL5Q5H9L2 206 aa22.76■■□□□ 1.23
UBE2D4-205ENST00000443780 KLHL23Q8NBE8 558 aa22.76■■□□□ 1.23
UBE2D4-205ENST00000443780 ADAMTS19Q8TE59 1207 aa22.76■■□□□ 1.23
UBE2D4-205ENST00000443780 MTRQ99707 1265 aa22.76■■□□□ 1.23
UBE2D4-205ENST00000443780 TMEM117Q9H0C3 514 aa22.76■■□□□ 1.23
UBE2D4-205ENST00000443780 UBE2ZQ9H832 354 aaPredicted RBP22.76■■□□□ 1.23
UBE2D4-205ENST00000443780 NOL7Q9UMY1 257 aaKnown RBP22.76■■□□□ 1.23
UBE2D4-205ENST00000443780 KIF3AQ9Y496 699 aa22.76■■□□□ 1.23
UBE2D4-205ENST00000443780 ASAP2O43150 1006 aa22.75■■□□□ 1.23
UBE2D4-205ENST00000443780 EOMESO95936 686 aa22.75■■□□□ 1.23
UBE2D4-205ENST00000443780 SRGAP2CP0DJJ0 459 aa22.75■■□□□ 1.23
UBE2D4-205ENST00000443780 SPATA31C1P0DKV0 1188 aa22.75■■□□□ 1.23
UBE2D4-205ENST00000443780 TECP42680 631 aa22.75■■□□□ 1.23
UBE2D4-205ENST00000443780 CAMK1Q14012 370 aa22.75■■□□□ 1.23
UBE2D4-205ENST00000443780 SPOUT1Q5T280 376 aaKnown RBP22.75■■□□□ 1.23
UBE2D4-205ENST00000443780 CATSPER4Q7RTX7 472 aa22.75■■□□□ 1.23
UBE2D4-205ENST00000443780 ZNF598Q86UK7 904 aaKnown RBP22.75■■□□□ 1.23
UBE2D4-205ENST00000443780 FERMT3Q86UX7 667 aa22.75■■□□□ 1.23
UBE2D4-205ENST00000443780 SPPL3Q8TCT6 385 aa22.75■■□□□ 1.23
UBE2D4-205ENST00000443780 CASD1Q96PB1 797 aa22.75■■□□□ 1.23
UBE2D4-205ENST00000443780 XPNPEP1Q9NQW7 623 aa22.75■■□□□ 1.23
UBE2D4-205ENST00000443780 TYW1Q9NV66 732 aaKnown RBP22.75■■□□□ 1.23
UBE2D4-205ENST00000443780 XIRP2A4UGR9 3374 aa22.74■■□□□ 1.23
UBE2D4-205ENST00000443780 XRCC6P12956 609 aaKnown RBP eCLIP22.74■■□□□ 1.23
UBE2D4-205ENST00000443780 MCM2P49736 904 aa22.74■■□□□ 1.23
UBE2D4-205ENST00000443780 SRGAP1Q7Z6B7 1085 aa22.74■■□□□ 1.23
UBE2D4-205ENST00000443780 RNF169Q8NCN4 708 aa22.74■■□□□ 1.23
UBE2D4-205ENST00000443780 PIGOQ8TEQ8 1089 aa22.74■■□□□ 1.23
UBE2D4-205ENST00000443780 TRAIPQ9BWF2 469 aa22.74■■□□□ 1.23
UBE2D4-205ENST00000443780 TUFT1Q9NNX1 390 aa22.74■■□□□ 1.23
UBE2D4-205ENST00000443780 AAASQ9NRG9 546 aa22.74■■□□□ 1.23
UBE2D4-205ENST00000443780 HCSTQ9UBK5 93 aa22.74■■□□□ 1.23
UBE2D4-205ENST00000443780 PIN4Q9Y237 131 aaKnown RBP22.74■■□□□ 1.23
UBE2D4-205ENST00000443780 PCDHB12Q9Y5F1 795 aa22.74■■□□□ 1.23
UBE2D4-205ENST00000443780 BDP1A6H8Y1 2624 aa22.74■■□□□ 1.23
UBE2D4-205ENST00000443780 A0A087WWV3 80 aa22.73■■□□□ 1.23
UBE2D4-205ENST00000443780 DGAT1O75907 488 aa22.73■■□□□ 1.23
UBE2D4-205ENST00000443780 ATF7P17544 494 aaPredicted RBP22.73■■□□□ 1.23
UBE2D4-205ENST00000443780 DNAJB1P25685 340 aa22.73■■□□□ 1.23
UBE2D4-205ENST00000443780 RARRES1P49788 294 aa22.73■■□□□ 1.23
UBE2D4-205ENST00000443780 TOB1P50616 345 aaPredicted RBP22.73■■□□□ 1.23
UBE2D4-205ENST00000443780 NBR1Q14596 966 aa22.73■■□□□ 1.23
UBE2D4-205ENST00000443780 CLLU1OSQ5K130 101 aa22.73■■□□□ 1.23
UBE2D4-205ENST00000443780 TWF2Q6IBS0 349 aaKnown RBP22.73■■□□□ 1.23
UBE2D4-205ENST00000443780 CATSPER3Q86XQ3 398 aa22.73■■□□□ 1.23
UBE2D4-205ENST00000443780 ABI1Q8IZP0 508 aa22.73■■□□□ 1.23
UBE2D4-205ENST00000443780 C4orf32Q8N8J7 132 aa22.73■■□□□ 1.23
UBE2D4-205ENST00000443780 CCDC43Q96MW1 224 aaKnown RBP22.73■■□□□ 1.23
UBE2D4-205ENST00000443780 POLR3CQ9BUI4 534 aaPredicted RBP22.73■■□□□ 1.23
UBE2D4-205ENST00000443780 CWH43Q9H720 699 aa22.73■■□□□ 1.23
UBE2D4-205ENST00000443780 MINDY3Q9H8M7 445 aa22.73■■□□□ 1.23
UBE2D4-205ENST00000443780 MED24O75448 989 aa22.72■■□□□ 1.23
UBE2D4-205ENST00000443780 PHKA2P46019 1235 aa22.72■■□□□ 1.23
UBE2D4-205ENST00000443780 MXD4Q14582 209 aaPredicted RBP22.72■■□□□ 1.23
UBE2D4-205ENST00000443780 COL19A1Q14993 1142 aa22.72■■□□□ 1.23
UBE2D4-205ENST00000443780 LRRC55Q6ZSA7 311 aa22.72■■□□□ 1.23
UBE2D4-205ENST00000443780 COLGALT1Q8NBJ5 622 aa22.72■■□□□ 1.23
UBE2D4-205ENST00000443780 RNF149Q8NC42 400 aa22.72■■□□□ 1.23
UBE2D4-205ENST00000443780 UHRF1Q96T88 793 aaPredicted RBP22.72■■□□□ 1.23
UBE2D4-205ENST00000443780 CSPG5O95196 566 aa22.71■■□□□ 1.23
UBE2D4-205ENST00000443780 KCNA5P22460 613 aa22.71■■□□□ 1.23
UBE2D4-205ENST00000443780 GJB2P29033 226 aa22.71■■□□□ 1.23
UBE2D4-205ENST00000443780 ERMNQ8TAM6 284 aa22.71■■□□□ 1.23
UBE2D4-205ENST00000443780 HELQQ8TDG4 1101 aa22.71■■□□□ 1.23
UBE2D4-205ENST00000443780 POF1BQ8WVV4 589 aa22.71■■□□□ 1.23
UBE2D4-205ENST00000443780 PABPC5Q96DU9 382 aaKnown RBP22.71■■□□□ 1.23
UBE2D4-205ENST00000443780 AGPAT5Q9NUQ2 364 aa22.71■■□□□ 1.23
UBE2D4-205ENST00000443780 SKIP12755 728 aa22.7■■□□□ 1.22
UBE2D4-205ENST00000443780 LAG3P18627 525 aa22.7■■□□□ 1.22
UBE2D4-205ENST00000443780 RPA1P27694 616 aa22.7■■□□□ 1.22
UBE2D4-205ENST00000443780 ARL2P36404 184 aa22.7■■□□□ 1.22
UBE2D4-205ENST00000443780 FXR2P51116 673 aaKnown RBP eCLIP22.7■■□□□ 1.22
UBE2D4-205ENST00000443780 CSPP1Q1MSJ5 1256 aa22.7■■□□□ 1.22
UBE2D4-205ENST00000443780 LEXMQ3ZCV2 418 aa22.7■■□□□ 1.22
UBE2D4-205ENST00000443780 LRRC43Q8N309 656 aa22.7■■□□□ 1.22
UBE2D4-205ENST00000443780 NACC1Q96RE7 527 aa22.7■■□□□ 1.22
UBE2D4-205ENST00000443780 FAM105AQ9NUU6 356 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms