RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 GALK1P51570 392 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 EPHB4P54760 987 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 SKOR1P84550 965 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 WASHC5Q12768 1159 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 BNIP1Q12981 228 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 PSMD6Q15008 389 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 STK38Q15208 465 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 CYTH1Q15438 398 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 PKN1Q16512 942 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 SLC2A7Q6PXP3 512 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 NOP9Q86U38 636 aaKnown RBP2.99□□□□□ -1.93
LIG4-203ENST00000442234 RSPH3Q86UC2 560 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 ST13P4Q8IZP2 240 aaPredicted RBP2.99□□□□□ -1.93
LIG4-203ENST00000442234 SPICE1Q8N0Z3 855 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 SUN5Q8TC36 379 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 DQX1Q8TE96 717 aaKnown RBP2.99□□□□□ -1.93
LIG4-203ENST00000442234 APPBP2Q92624 585 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 PPP2R3CQ969Q6 453 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 SYT15Q9BQS2 421 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 ESYT1Q9BSJ8 1104 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 APOL5Q9BWW9 433 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 CEP44Q9C0F1 390 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 FAM192AQ9GZU8 254 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 IFT122Q9HBG6 1241 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 PRDM6Q9NQX0 595 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 STIM2Q9P246 746 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 PDP2Q9P2J9 529 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 GGA2Q9UJY4 613 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 NOD1Q9Y239 953 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 LZTS1Q9Y250 596 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 RABGAP1Q9Y3P9 1069 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 CYP46A1Q9Y6A2 500 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 SAR1BQ9Y6B6 198 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 CNTNAP1P78357 1384 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 CACNA1EQ15878 2313 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 MEGF6O75095 1541 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 A6NJR5 290 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 CCT8L1PA6NM43 557 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 BOLA2-SMG1P6H3BVE0 249 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 GSTT2P0CG29 244 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 GSTT2BP0CG30 244 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 EEF2P13639 858 aaKnown RBP2.99□□□□□ -1.93
LIG4-203ENST00000442234 FOSL2P15408 326 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 NQO1P15559 274 aaKnown RBP2.99□□□□□ -1.93
LIG4-203ENST00000442234 KLRK1P26718 216 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 IREB2P48200 963 aaKnown RBP2.99□□□□□ -1.93
LIG4-203ENST00000442234 INHBCP55103 352 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 UBXN2AP68543 259 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 MYL5Q02045 173 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 ARHGEF6Q15052 776 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 TAF7Q15545 349 aaPredicted RBP2.99□□□□□ -1.93
LIG4-203ENST00000442234 EMC10Q5UCC4 262 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 PHLDB3Q6NSJ2 640 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 DHX40Q8IX18 779 aaKnown RBP2.99□□□□□ -1.93
LIG4-203ENST00000442234 KIF2BQ8N4N8 673 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 SLC35B4Q969S0 331 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 CDK5RAP3Q96JB5 506 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 PHOX2BQ99453 314 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 SH3GL2Q99962 352 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 SPOCK3Q9BQ16 436 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 RPAP3Q9H6T3 665 aaPredicted RBP2.99□□□□□ -1.93
LIG4-203ENST00000442234 ZFYVE28Q9HCC9 887 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 ZNF304Q9HCX3 659 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 MYOZ2Q9NPC6 264 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 SEC63Q9UGP8 760 aaKnown RBP2.99□□□□□ -1.93
LIG4-203ENST00000442234 PPP1R9AQ9ULJ8 1098 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 EFR3BQ9Y2G0 817 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 TDRKHQ9Y2W6 561 aaKnown RBP2.99□□□□□ -1.93
LIG4-203ENST00000442234 SLC4A7Q9Y6M7 1214 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 GOLGA8IPA6NC78 632 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 MAGEA13PA6NCF6 341 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 PCP4L1A6NKN8 68 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 AKR1B15C9JRZ8 316 aaPredicted RBP2.99□□□□□ -1.93
LIG4-203ENST00000442234 IGF2BP3O00425 579 aaKnown RBP eCLIP2.99□□□□□ -1.93
LIG4-203ENST00000442234 ENC1O14682 589 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 CTNND1O60716 968 aaKnown RBP2.99□□□□□ -1.93
LIG4-203ENST00000442234 ITGA2BP08514 1039 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 UBTFL6P0CB48 400 aaPredicted RBP2.99□□□□□ -1.93
LIG4-203ENST00000442234 ZCCHC18P0CG32 403 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 GHRP10912 638 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 EIF2B2P49770 351 aaKnown RBP2.99□□□□□ -1.93
LIG4-203ENST00000442234 ALDH5A1P51649 535 aaPredicted RBP2.99□□□□□ -1.93
LIG4-203ENST00000442234 CCR3P51677 355 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 CSE1LP55060 971 aaKnown RBP2.99□□□□□ -1.93
LIG4-203ENST00000442234 BIRC3Q13489 604 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 RIPK1Q13546 671 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 WTAPQ15007 396 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 CNGA3Q16281 694 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 DPCR1Q3MIW9 517 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 TMTC4Q5T4D3 741 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 ADALQ6DHV7 355 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 ANO7Q6IWH7 933 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 TMEM214Q6NUQ4 689 aaKnown RBP2.99□□□□□ -1.93
LIG4-203ENST00000442234 IRGCQ6NXR0 463 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 C8orf74Q6P047 294 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 LLGL2Q6P1M3 1020 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 LRRC8BQ6P9F7 803 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 KDM7AQ6ZMT4 941 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 FAM47EQ6ZV65 393 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 RUFY3Q7L099 469 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms