RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 SLC7A3Q8WY07 619 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 CEP63Q96MT8 703 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 SMARCAD1Q9H4L7 1026 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 C17orf75Q9HAS0 396 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 TYW1Q9NV66 732 aaKnown RBP8.87□□□□□ -0.99
CCDC39-201ENST00000442201 LCMT1Q9UIC8 334 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 TRAF3IP3Q9Y228 551 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 KIAA1217Q5T5P2 1943 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 LRRC37A2A6NM11 1700 aa8.87□□□□□ -0.99
CCDC39-201ENST00000442201 NKRFO15226 690 aaKnown RBP eCLIP8.86□□□□□ -0.99
CCDC39-201ENST00000442201 CALUO43852 315 aaPredicted RBP8.86□□□□□ -0.99
CCDC39-201ENST00000442201 MTIF2P46199 727 aaKnown RBP8.86□□□□□ -0.99
CCDC39-201ENST00000442201 SMTNP53814 917 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 PEX3P56589 373 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 DUSP28Q4G0W2 176 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 ZC2HC1CQ53FD0 456 aaPredicted RBP8.86□□□□□ -0.99
CCDC39-201ENST00000442201 GJC2Q5T442 439 aaPredicted RBP8.86□□□□□ -0.99
CCDC39-201ENST00000442201 HS2ST1Q7LGA3 356 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 C10orf67Q8IYJ2 551 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 EMID1Q96A84 441 aaPredicted RBP8.86□□□□□ -0.99
CCDC39-201ENST00000442201 APBA2Q99767 749 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 TUBGCP2Q9BSJ2 902 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 GJD2Q9UKL4 321 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 PLXNB2O15031 1838 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 CETN3O15182 167 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 PTGS1P23219 599 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 HOXD13P35453 343 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 RFC5P40937 340 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 FCGRTP55899 365 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 GSDMDP57764 484 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 DMP1Q13316 513 aaPredicted RBP8.86□□□□□ -0.99
CCDC39-201ENST00000442201 EMC2Q15006 297 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 CCDC144BQ3MJ40 725 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 PACS2Q86VP3 889 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 TRIM50Q86XT4 487 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 ATP8B4Q8TF62 1192 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 DEF6Q9H4E7 631 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 DHX33Q9H6R0 707 aaKnown RBP8.86□□□□□ -0.99
CCDC39-201ENST00000442201 XPNPEP1Q9NQW7 623 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 PDLIM7Q9NR12 457 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 PPME1Q9Y570 386 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 PES1O00541 588 aaKnown RBP8.86□□□□□ -0.99
CCDC39-201ENST00000442201 TEX33O43247 280 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 PPP1R37O75864 691 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 GNA14O95837 355 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 NR2F2P24468 414 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 RPL13P26373 211 aaKnown RBP8.86□□□□□ -0.99
CCDC39-201ENST00000442201 MARK3P27448 753 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 MAGEA9P43362 315 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 RTP1P59025 263 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 KCNA1Q09470 495 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 ADAM9Q13443 819 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 TTC31Q49AM3 519 aaPredicted RBP8.86□□□□□ -0.99
CCDC39-201ENST00000442201 OLFML2BQ68BL8 750 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 SPECC1LQ69YQ0 1117 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 HAUS6Q7Z4H7 955 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 SYCP3Q8IZU3 236 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 PPTC7Q8NI37 304 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 AFG1LQ8WV93 481 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 IFT74Q96LB3 600 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 GBP3Q9H0R5 595 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 ST6GALNAC4Q9H4F1 302 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 PAXBP1Q9Y5B6 917 aa8.86□□□□□ -0.99
CCDC39-201ENST00000442201 ZNF236Q9UL36 1845 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.85□□□□□ -0.99
CCDC39-201ENST00000442201 CCDC169A6NNP5 214 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 LGALS16A8MUM7 142 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 SMPD1P17405 629 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 PSMC4P43686 418 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 TNFAIP2Q03169 654 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 TARBP2Q15633 366 aaKnown RBP8.85□□□□□ -0.99
CCDC39-201ENST00000442201 CCDC40Q4G0X9 1142 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 GOLGA5Q8TBA6 731 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 SPIRE2Q8WWL2 714 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 STRA6Q9BX79 667 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 TMEM206Q9H813 350 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 ERAP1Q9NZ08 941 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 SLC16A4O15374 487 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 TGFB1I1O43294 461 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 PPFIA4O75335 1185 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 NPTX2P47972 431 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 NCKAP1LP55160 1127 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 LACTBP83111 547 aaPredicted RBP8.85□□□□□ -0.99
CCDC39-201ENST00000442201 CCL14Q16627 93 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 ZC3H3Q8IXZ2 948 aaKnown RBP8.85□□□□□ -0.99
CCDC39-201ENST00000442201 EXOC8Q8IYI6 725 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 OR6J1Q8NGC5 347 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 ACCSQ96QU6 501 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 NTPCRQ9BSD7 190 aaKnown RBP8.85□□□□□ -0.99
CCDC39-201ENST00000442201 TACO1Q9BSH4 297 aaKnown RBP8.85□□□□□ -0.99
CCDC39-201ENST00000442201 NOC4LQ9BVI4 516 aaKnown RBP8.85□□□□□ -0.99
CCDC39-201ENST00000442201 POLR3FQ9H1D9 316 aaPredicted RBP8.85□□□□□ -0.99
CCDC39-201ENST00000442201 KMT5AQ9NQR1 393 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 FLRT1Q9NZU1 646 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 CWC15Q9P013 229 aaKnown RBP8.85□□□□□ -0.99
CCDC39-201ENST00000442201 TRPC6Q9Y210 931 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 ZNFX1Q9P2E3 1918 aaKnown RBP8.85□□□□□ -0.99
CCDC39-201ENST00000442201 HBP1O60381 514 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 NR3C1P04150 777 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 LGALS2P05162 132 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms