RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 MPP2Q14168 576 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 TMED2Q15363 201 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 ARHGAP44Q17R89 818 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 HERC4Q5GLZ8 1057 aaPredicted RBP8.1□□□□□ -1.11
HDAC9-214ENST00000441542 KIAA1755Q5JYT7 1200 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 C6orf118Q5T5N4 469 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 KCNK18Q7Z418 384 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 MYLK4Q86YV6 388 aaPredicted RBP8.1□□□□□ -1.11
HDAC9-214ENST00000441542 SCYL3Q8IZE3 742 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 MYOCDQ8IZQ8 938 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 EPB41L4BQ9H329 900 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 KCNQ5Q9NR82 932 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 ASIC3Q9UHC3 531 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 PCDHA6Q9UN73 950 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 PCDHA4Q9UN74 947 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 PCDHA8Q9Y5H6 950 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 MARF1Q9Y4F3 1742 aaKnown RBP8.1□□□□□ -1.11
HDAC9-214ENST00000441542 LRRC37A3O60309 1634 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.1□□□□□ -1.11
HDAC9-214ENST00000441542 CCDC188H7C350 402 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 LRRN2O75325 713 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 LCA5LO95447 670 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 GALCP54803 685 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 OVGP1Q12889 678 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 MKRN3Q13064 507 aaKnown RBP8.1□□□□□ -1.11
HDAC9-214ENST00000441542 KYNUQ16719 465 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 CFAP157Q5JU67 520 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 FOXB2Q5VYV0 432 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 ARL6IP4Q66PJ3 421 aaKnown RBP8.1□□□□□ -1.11
HDAC9-214ENST00000441542 CENPPQ6IPU0 288 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 ZNF746Q6NUN9 644 aaPredicted RBP8.1□□□□□ -1.11
HDAC9-214ENST00000441542 PHLDB2Q86SQ0 1253 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 CPNE8Q86YQ8 564 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 MKNK1Q9BUB5 465 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 MXD3Q9BW11 206 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 TBC1D10AQ9BXI6 508 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 DENND2DQ9H6A0 471 aaPredicted RBP8.1□□□□□ -1.11
HDAC9-214ENST00000441542 RXFP1Q9HBX9 757 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 NAGPAQ9UK23 515 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 PCDHB13Q9Y5F0 798 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 N4BP2Q86UW6 1770 aaPredicted RBP8.09□□□□□ -1.11
HDAC9-214ENST00000441542 USP17L3A6NCW0 530 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 USP17L4A6NCW7 530 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 ATP6V1G1O75348 118 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 CALML3P27482 149 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 KCNH2Q12809 1159 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 PLS1Q14651 629 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 PFKFB3Q16875 520 aaPredicted RBP8.09□□□□□ -1.11
HDAC9-214ENST00000441542 KHDC1Q4VXA5 237 aaKnown RBP8.09□□□□□ -1.11
HDAC9-214ENST00000441542 MDH1BQ5I0G3 518 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 SNX30Q5VWJ9 437 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 USP17L1Q7RTZ2 530 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 C1orf131Q8NDD1 294 aaKnown RBP8.09□□□□□ -1.11
HDAC9-214ENST00000441542 ACTRT1Q8TDG2 376 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 SCG3Q8WXD2 468 aaKnown RBP8.09□□□□□ -1.11
HDAC9-214ENST00000441542 LARP4BQ92615 738 aaKnown RBP8.09□□□□□ -1.11
HDAC9-214ENST00000441542 CRAMP1Q96RY5 1269 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 NDNQ99608 321 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 GALNT8Q9NY28 637 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 CYP39A1Q9NYL5 469 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 TMEM59LQ9UK28 342 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 CHMP2BQ9UQN3 213 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 NIP7Q9Y221 180 aaKnown RBP eCLIP8.09□□□□□ -1.11
HDAC9-214ENST00000441542 TCRBV7S2A1N4TA0A589 114 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 CAPN9O14815 690 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 CLIC2O15247 247 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 HNRNPRO43390 633 aaKnown RBP8.09□□□□□ -1.11
HDAC9-214ENST00000441542 OPHN1O60890 802 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 FLOT1O75955 427 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 AGTP01019 485 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 ALADP13716 330 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 TNNI2P48788 182 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 KCNA1Q09470 495 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 CTTNQ14247 550 aaKnown RBP8.09□□□□□ -1.11
HDAC9-214ENST00000441542 MESDQ14696 234 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 PUM3Q15397 648 aaKnown RBP8.09□□□□□ -1.11
HDAC9-214ENST00000441542 ALX1Q15699 326 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 LRRC55Q6ZSA7 311 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 CEP128Q6ZU80 1094 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 TAB3Q8N5C8 712 aaPredicted RBP8.09□□□□□ -1.11
HDAC9-214ENST00000441542 TEX9Q8N6V9 391 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 NMD3Q96D46 503 aaKnown RBP8.09□□□□□ -1.11
HDAC9-214ENST00000441542 DYNLL2Q96FJ2 89 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 DNAJC1Q96KC8 554 aaKnown RBP8.09□□□□□ -1.11
HDAC9-214ENST00000441542 LRRC37BQ96QE4 947 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 IKZF4Q9H2S9 585 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 SLITRK6Q9H5Y7 841 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 USP40Q9NVE5 1235 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 RASAL2Q9UJF2 1139 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 PFASO15067 1338 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 RPTORQ8N122 1335 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 USP54Q70EL1 1684 aa8.09□□□□□ -1.11
HDAC9-214ENST00000441542 POC1B-GALNT4F8VUJ3 575 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 ATMINO43313 823 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-214ENST00000441542 UNC5CO95185 931 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 SPATA31D3P0C874 917 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 GJC1P36383 396 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 TRAPPC10P48553 1259 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 FKBP3Q00688 224 aaKnown RBP8.08□□□□□ -1.12
HDAC9-214ENST00000441542 MCL1Q07820 350 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms