RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 CCT6AP40227 531 aaKnown RBP15.3■□□□□ 0.04
LTBR-202ENST00000440421 FXR2P51116 673 aaKnown RBP eCLIP15.3■□□□□ 0.04
LTBR-202ENST00000440421 FAM189BP81408 668 aa15.3■□□□□ 0.04
LTBR-202ENST00000440421 RILPL1Q5EBL4 403 aa15.3■□□□□ 0.04
LTBR-202ENST00000440421 MAEAQ7L5Y9 396 aa15.3■□□□□ 0.04
LTBR-202ENST00000440421 CATSPER4Q7RTX7 472 aa15.3■□□□□ 0.04
LTBR-202ENST00000440421 FERMT3Q86UX7 667 aa15.3■□□□□ 0.04
LTBR-202ENST00000440421 ECHDC2Q86YB7 292 aa15.3■□□□□ 0.04
LTBR-202ENST00000440421 RNF149Q8NC42 400 aa15.3■□□□□ 0.04
LTBR-202ENST00000440421 CLP1Q92989 425 aaKnown RBP15.3■□□□□ 0.04
LTBR-202ENST00000440421 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.3■□□□□ 0.04
LTBR-202ENST00000440421 LMCD1Q9NZU5 365 aa15.3■□□□□ 0.04
LTBR-202ENST00000440421 LRWD1Q9UFC0 647 aa15.3■□□□□ 0.04
LTBR-202ENST00000440421 PIN4Q9Y237 131 aaKnown RBP15.3■□□□□ 0.04
LTBR-202ENST00000440421 RWDD3Q9Y3V2 267 aa15.3■□□□□ 0.04
LTBR-202ENST00000440421 CSPG5O95196 566 aa15.29■□□□□ 0.04
LTBR-202ENST00000440421 XRCC6P12956 609 aaKnown RBP eCLIP15.29■□□□□ 0.04
LTBR-202ENST00000440421 RPA1P27694 616 aa15.29■□□□□ 0.04
LTBR-202ENST00000440421 IL17AQ16552 155 aa15.29■□□□□ 0.04
LTBR-202ENST00000440421 SPOUT1Q5T280 376 aaKnown RBP15.29■□□□□ 0.04
LTBR-202ENST00000440421 HAUS3Q68CZ6 603 aa15.29■□□□□ 0.04
LTBR-202ENST00000440421 TWF2Q6IBS0 349 aaKnown RBP15.29■□□□□ 0.04
LTBR-202ENST00000440421 ASAP3Q8TDY4 903 aa15.29■□□□□ 0.04
LTBR-202ENST00000440421 NACC1Q96RE7 527 aa15.29■□□□□ 0.04
LTBR-202ENST00000440421 ELAC1Q9H777 363 aaKnown RBP15.29■□□□□ 0.04
LTBR-202ENST00000440421 MINDY3Q9H8M7 445 aa15.29■□□□□ 0.04
LTBR-202ENST00000440421 CHST12Q9NRB3 414 aa15.29■□□□□ 0.04
LTBR-202ENST00000440421 FOXD4L1Q9NU39 408 aa15.29■□□□□ 0.04
LTBR-202ENST00000440421 DACT1Q9NYF0 836 aa15.29■□□□□ 0.04
LTBR-202ENST00000440421 THEGQ9P2T0 379 aa15.29■□□□□ 0.04
LTBR-202ENST00000440421 HCSTQ9UBK5 93 aa15.29■□□□□ 0.04
LTBR-202ENST00000440421 KIAA1671Q9BY89 1806 aa15.29■□□□□ 0.04
LTBR-202ENST00000440421 TRANK1O15050 2925 aa15.28■□□□□ 0.04
LTBR-202ENST00000440421 A0A0U1RQF3 1178 aa15.28■□□□□ 0.04
LTBR-202ENST00000440421 VPS37CA5D8V6 355 aaPredicted RBP15.28■□□□□ 0.04
LTBR-202ENST00000440421 PP2D1A8MPX8 630 aa15.28■□□□□ 0.04
LTBR-202ENST00000440421 C5orf67F2Z3F1 127 aa15.28■□□□□ 0.04
LTBR-202ENST00000440421 LAD1O00515 517 aa15.28■□□□□ 0.04
LTBR-202ENST00000440421 ASAP2O43150 1006 aa15.28■□□□□ 0.04
LTBR-202ENST00000440421 RB1P06400 928 aa15.28■□□□□ 0.04
LTBR-202ENST00000440421 MXD4Q14582 209 aaPredicted RBP15.28■□□□□ 0.04
LTBR-202ENST00000440421 PTPROQ16827 1216 aa15.28■□□□□ 0.04
LTBR-202ENST00000440421 LONRF3Q496Y0 759 aa15.28■□□□□ 0.04
LTBR-202ENST00000440421 SRGAP1Q7Z6B7 1085 aa15.28■□□□□ 0.04
LTBR-202ENST00000440421 SNX29Q8TEQ0 813 aa15.28■□□□□ 0.04
LTBR-202ENST00000440421 MRPL38Q96DV4 380 aaKnown RBP15.28■□□□□ 0.04
LTBR-202ENST00000440421 C11orf84Q9BUA3 381 aaPredicted RBP15.28■□□□□ 0.04
LTBR-202ENST00000440421 RAB34Q9BZG1 259 aa15.28■□□□□ 0.04
LTBR-202ENST00000440421 POLR3FQ9H1D9 316 aaPredicted RBP15.28■□□□□ 0.04
LTBR-202ENST00000440421 ALG13Q9NP73 1137 aaKnown RBP15.28■□□□□ 0.04
LTBR-202ENST00000440421 GPRC5CQ9NQ84 441 aa15.28■□□□□ 0.04
LTBR-202ENST00000440421 RNF19AQ9NV58 838 aa15.28■□□□□ 0.04
LTBR-202ENST00000440421 FNDC1Q4ZHG4 1894 aaPredicted RBP15.28■□□□□ 0.04
LTBR-202ENST00000440421 ARHGEF35A5YM69 484 aa15.27■□□□□ 0.04
LTBR-202ENST00000440421 GRM6O15303 877 aa15.27■□□□□ 0.04
LTBR-202ENST00000440421 CDC25AP30304 524 aa15.27■□□□□ 0.04
LTBR-202ENST00000440421 ARL2P36404 184 aa15.27■□□□□ 0.04
LTBR-202ENST00000440421 PRPHP41219 470 aa15.27■□□□□ 0.04
LTBR-202ENST00000440421 PHKA2P46019 1235 aa15.27■□□□□ 0.04
LTBR-202ENST00000440421 CAPSQ13938 189 aa15.27■□□□□ 0.04
LTBR-202ENST00000440421 TFDP1Q14186 410 aa15.27■□□□□ 0.04
LTBR-202ENST00000440421 PDIA5Q14554 519 aa15.27■□□□□ 0.04
LTBR-202ENST00000440421 ECM1Q16610 540 aa15.27■□□□□ 0.04
LTBR-202ENST00000440421 DTHD1Q6ZMT9 781 aa15.27■□□□□ 0.04
LTBR-202ENST00000440421 ABI1Q8IZP0 508 aa15.27■□□□□ 0.04
LTBR-202ENST00000440421 IGSF22Q8N9C0 903 aa15.27■□□□□ 0.04
LTBR-202ENST00000440421 PLVAPQ9BX97 442 aa15.27■□□□□ 0.04
LTBR-202ENST00000440421 TMEM117Q9H0C3 514 aa15.27■□□□□ 0.04
LTBR-202ENST00000440421 AGPAT5Q9NUQ2 364 aa15.27■□□□□ 0.04
LTBR-202ENST00000440421 TYW1Q9NV66 732 aaKnown RBP15.27■□□□□ 0.04
LTBR-202ENST00000440421 DBR1Q9UK59 544 aaKnown RBP15.27■□□□□ 0.04
LTBR-202ENST00000440421 KIAA1024Q9UPX6 916 aa15.27■□□□□ 0.04
LTBR-202ENST00000440421 INO80B-WBP1J3KQ70 363 aa15.26■□□□□ 0.03
LTBR-202ENST00000440421 K7ELQ4 463 aaPredicted RBP15.26■□□□□ 0.03
LTBR-202ENST00000440421 DLL1O00548 723 aa15.26■□□□□ 0.03
LTBR-202ENST00000440421 HOXA2O43364 376 aa15.26■□□□□ 0.03
LTBR-202ENST00000440421 ERLIN2O94905 339 aa15.26■□□□□ 0.03
LTBR-202ENST00000440421 EOMESO95936 686 aa15.26■□□□□ 0.03
LTBR-202ENST00000440421 ATF7P17544 494 aaPredicted RBP15.26■□□□□ 0.03
LTBR-202ENST00000440421 GLRA2P23416 452 aa15.26■□□□□ 0.03
LTBR-202ENST00000440421 ATP2C1P98194 919 aaPredicted RBP15.26■□□□□ 0.03
LTBR-202ENST00000440421 TFF2Q03403 129 aa15.26■□□□□ 0.03
LTBR-202ENST00000440421 CLLU1OSQ5K130 101 aa15.26■□□□□ 0.03
LTBR-202ENST00000440421 PADI6Q6TGC4 694 aa15.26■□□□□ 0.03
LTBR-202ENST00000440421 ZNF598Q86UK7 904 aaKnown RBP15.26■□□□□ 0.03
LTBR-202ENST00000440421 KLHL23Q8NBE8 558 aa15.26■□□□□ 0.03
LTBR-202ENST00000440421 HELQQ8TDG4 1101 aa15.26■□□□□ 0.03
LTBR-202ENST00000440421 LPPQ93052 612 aa15.26■□□□□ 0.03
LTBR-202ENST00000440421 CASD1Q96PB1 797 aa15.26■□□□□ 0.03
LTBR-202ENST00000440421 DDX19AQ9NUU7 478 aaKnown RBP15.26■□□□□ 0.03
LTBR-202ENST00000440421 PLAGL2Q9UPG8 496 aa15.26■□□□□ 0.03
LTBR-202ENST00000440421 PRUNE2Q8WUY3 3088 aa15.26■□□□□ 0.03
LTBR-202ENST00000440421 ITGB1P05556 798 aa15.25■□□□□ 0.03
LTBR-202ENST00000440421 MUTP22033 750 aa15.25■□□□□ 0.03
LTBR-202ENST00000440421 PTENP60484 403 aa15.25■□□□□ 0.03
LTBR-202ENST00000440421 ZRSR1Q15695 479 aaKnown RBP15.25■□□□□ 0.03
LTBR-202ENST00000440421 TIGD5Q53EQ6 642 aa15.25■□□□□ 0.03
LTBR-202ENST00000440421 KRT79Q5XKE5 535 aa15.25■□□□□ 0.03
LTBR-202ENST00000440421 LRRC55Q6ZSA7 311 aa15.25■□□□□ 0.03
LTBR-202ENST00000440421 MCPH1Q8NEM0 835 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms