RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 ASAP2O43150 1006 aa26.32■■□□□ 1.8
VARS-217ENST00000440048 LPXNO60711 386 aa26.32■■□□□ 1.8
VARS-217ENST00000440048 SRGAP2CP0DJJ0 459 aa26.32■■□□□ 1.8
VARS-217ENST00000440048 ZSCAN20P17040 1043 aaPredicted RBP26.32■■□□□ 1.8
VARS-217ENST00000440048 SYT1P21579 422 aa26.32■■□□□ 1.8
VARS-217ENST00000440048 MUTP22033 750 aa26.32■■□□□ 1.8
VARS-217ENST00000440048 ECM1Q16610 540 aa26.32■■□□□ 1.8
VARS-217ENST00000440048 GDPD5Q8WTR4 605 aa26.32■■□□□ 1.8
VARS-217ENST00000440048 SAMD11Q96NU1 681 aa26.32■■□□□ 1.8
VARS-217ENST00000440048 USO1O60763 962 aaKnown RBP26.31■■□□□ 1.8
VARS-217ENST00000440048 POU3F3P20264 500 aaPredicted RBP26.31■■□□□ 1.8
VARS-217ENST00000440048 SFPQP23246 707 aaKnown RBP eCLIP26.31■■□□□ 1.8
VARS-217ENST00000440048 GATMP50440 423 aa26.31■■□□□ 1.8
VARS-217ENST00000440048 BTG3Q14201 252 aaPredicted RBP26.31■■□□□ 1.8
VARS-217ENST00000440048 EPC2Q52LR7 807 aa26.31■■□□□ 1.8
VARS-217ENST00000440048 FBXO22Q8NEZ5 403 aa26.31■■□□□ 1.8
VARS-217ENST00000440048 RNF216Q9NWF9 866 aaPredicted RBP26.31■■□□□ 1.8
VARS-217ENST00000440048 MTCH2Q9Y6C9 303 aa26.31■■□□□ 1.8
VARS-217ENST00000440048 STK24Q9Y6E0 443 aa26.31■■□□□ 1.8
VARS-217ENST00000440048 FNDC1Q4ZHG4 1894 aaPredicted RBP26.31■■□□□ 1.8
VARS-217ENST00000440048 PP2D1A8MPX8 630 aa26.3■■□□□ 1.8
VARS-217ENST00000440048 ARL2P36404 184 aa26.3■■□□□ 1.8
VARS-217ENST00000440048 MXD4Q14582 209 aaPredicted RBP26.3■■□□□ 1.8
VARS-217ENST00000440048 TMEM192Q8IY95 271 aa26.3■■□□□ 1.8
VARS-217ENST00000440048 CMTR2Q8IYT2 770 aaKnown RBP26.3■■□□□ 1.8
VARS-217ENST00000440048 RNF149Q8NC42 400 aa26.3■■□□□ 1.8
VARS-217ENST00000440048 SNX29Q8TEQ0 813 aa26.3■■□□□ 1.8
VARS-217ENST00000440048 TMEM161AQ9NX61 479 aa26.3■■□□□ 1.8
VARS-217ENST00000440048 TTC28Q96AY4 2481 aa26.3■■□□□ 1.8
VARS-217ENST00000440048 GTPBP6O43824 516 aaPredicted RBP26.29■■□□□ 1.8
VARS-217ENST00000440048 LINC00271P0C7V0 271 aa26.29■■□□□ 1.8
VARS-217ENST00000440048 PAN2Q504Q3 1202 aaKnown RBP26.29■■□□□ 1.8
VARS-217ENST00000440048 CATSPER4Q7RTX7 472 aa26.29■■□□□ 1.8
VARS-217ENST00000440048 SRGAP1Q7Z6B7 1085 aa26.29■■□□□ 1.8
VARS-217ENST00000440048 HSCBQ8IWL3 235 aa26.29■■□□□ 1.8
VARS-217ENST00000440048 ASAP3Q8TDY4 903 aa26.29■■□□□ 1.8
VARS-217ENST00000440048 PPM1EQ8WY54 764 aa26.29■■□□□ 1.8
VARS-217ENST00000440048 ELAC1Q9H777 363 aaKnown RBP26.29■■□□□ 1.8
VARS-217ENST00000440048 MINDY3Q9H8M7 445 aa26.29■■□□□ 1.8
VARS-217ENST00000440048 CHST12Q9NRB3 414 aa26.29■■□□□ 1.8
VARS-217ENST00000440048 KIAA1024Q9UPX6 916 aa26.29■■□□□ 1.8
VARS-217ENST00000440048 NCOR1O75376 2440 aa26.29■■□□□ 1.8
VARS-217ENST00000440048 ARHGEF35A5YM69 484 aa26.28■■□□□ 1.8
VARS-217ENST00000440048 CDC25AP30304 524 aa26.28■■□□□ 1.8
VARS-217ENST00000440048 CCDC85BQ15834 202 aaPredicted RBP26.28■■□□□ 1.8
VARS-217ENST00000440048 FAM102BQ5T8I3 360 aa26.28■■□□□ 1.8
VARS-217ENST00000440048 KRT79Q5XKE5 535 aa26.28■■□□□ 1.8
VARS-217ENST00000440048 ARL6IP4Q66PJ3 421 aaKnown RBP26.28■■□□□ 1.8
VARS-217ENST00000440048 ECHDC2Q86YB7 292 aa26.28■■□□□ 1.8
VARS-217ENST00000440048 CLP1Q92989 425 aaKnown RBP26.28■■□□□ 1.8
VARS-217ENST00000440048 POLR3FQ9H1D9 316 aaPredicted RBP26.28■■□□□ 1.8
VARS-217ENST00000440048 KIAA1671Q9BY89 1806 aa26.28■■□□□ 1.8
VARS-217ENST00000440048 PADI6Q6TGC4 694 aa26.27■■□□□ 1.8
VARS-217ENST00000440048 MAEAQ7L5Y9 396 aa26.27■■□□□ 1.8
VARS-217ENST00000440048 MICALL1Q8N3F8 863 aa26.27■■□□□ 1.8
VARS-217ENST00000440048 MCPH1Q8NEM0 835 aa26.27■■□□□ 1.8
VARS-217ENST00000440048 MMTAG2Q9BU76 263 aaKnown RBP26.27■■□□□ 1.8
VARS-217ENST00000440048 GPRC5CQ9NQ84 441 aa26.27■■□□□ 1.8
VARS-217ENST00000440048 DDX19AQ9NUU7 478 aaKnown RBP26.27■■□□□ 1.8
VARS-217ENST00000440048 DACT1Q9NYF0 836 aa26.27■■□□□ 1.8
VARS-217ENST00000440048 PIN4Q9Y237 131 aaKnown RBP26.27■■□□□ 1.8
VARS-217ENST00000440048 MRPL42Q9Y6G3 142 aaKnown RBP26.27■■□□□ 1.8
VARS-217ENST00000440048 A0A0U1RQF3 1178 aa26.26■■□□□ 1.79
VARS-217ENST00000440048 VWA3AA6NCI4 1184 aa26.26■■□□□ 1.79
VARS-217ENST00000440048 FGFR1P11362 822 aa26.26■■□□□ 1.79
VARS-217ENST00000440048 GLRA2P23416 452 aa26.26■■□□□ 1.79
VARS-217ENST00000440048 CTNNB1P35222 781 aa26.26■■□□□ 1.79
VARS-217ENST00000440048 PHKA2P46019 1235 aa26.26■■□□□ 1.79
VARS-217ENST00000440048 PTENP60484 403 aa26.26■■□□□ 1.79
VARS-217ENST00000440048 RESTQ13127 1097 aa26.26■■□□□ 1.79
VARS-217ENST00000440048 CAPSQ13938 189 aa26.26■■□□□ 1.79
VARS-217ENST00000440048 TFDP1Q14186 410 aa26.26■■□□□ 1.79
VARS-217ENST00000440048 MTMR6Q9Y217 621 aa26.26■■□□□ 1.79
VARS-217ENST00000440048 RWDD3Q9Y3V2 267 aa26.26■■□□□ 1.79
VARS-217ENST00000440048 TBKBP1A7MCY6 615 aa26.25■■□□□ 1.79
VARS-217ENST00000440048 H3BNC9 293 aa26.25■■□□□ 1.79
VARS-217ENST00000440048 CYP11B2P19099 503 aa26.25■■□□□ 1.79
VARS-217ENST00000440048 BMPR1AP36894 532 aa26.25■■□□□ 1.79
VARS-217ENST00000440048 POU5F1BQ06416 359 aa26.25■■□□□ 1.79
VARS-217ENST00000440048 BHMT2Q9H2M3 363 aa26.25■■□□□ 1.79
VARS-217ENST00000440048 AGPAT5Q9NUQ2 364 aa26.25■■□□□ 1.79
VARS-217ENST00000440048 RNF19AQ9NV58 838 aa26.25■■□□□ 1.79
VARS-217ENST00000440048 LMCD1Q9NZU5 365 aa26.25■■□□□ 1.79
VARS-217ENST00000440048 C5orf67F2Z3F1 127 aa26.24■■□□□ 1.79
VARS-217ENST00000440048 BMP15O95972 392 aa26.24■■□□□ 1.79
VARS-217ENST00000440048 GPM6BQ13491 265 aa26.24■■□□□ 1.79
VARS-217ENST00000440048 SF3A1Q15459 793 aaKnown RBP26.24■■□□□ 1.79
VARS-217ENST00000440048 TWF2Q6IBS0 349 aaKnown RBP26.24■■□□□ 1.79
VARS-217ENST00000440048 ZNF598Q86UK7 904 aaKnown RBP26.24■■□□□ 1.79
VARS-217ENST00000440048 IFNLR1Q8IU57 520 aaPredicted RBP26.24■■□□□ 1.79
VARS-217ENST00000440048 TRAIPQ9BWF2 469 aa26.24■■□□□ 1.79
VARS-217ENST00000440048 STX6O43752 255 aa26.23■■□□□ 1.79
VARS-217ENST00000440048 RB1P06400 928 aa26.23■■□□□ 1.79
VARS-217ENST00000440048 ATF7P17544 494 aaPredicted RBP26.23■■□□□ 1.79
VARS-217ENST00000440048 RNF169Q8NCN4 708 aa26.23■■□□□ 1.79
VARS-217ENST00000440048 SYMPKQ92797 1274 aaKnown RBP26.23■■□□□ 1.79
VARS-217ENST00000440048 DNM3Q9UQ16 869 aa26.23■■□□□ 1.79
VARS-217ENST00000440048 E9PMD0 336 aa26.22■■□□□ 1.79
VARS-217ENST00000440048 HOXA2O43364 376 aa26.22■■□□□ 1.79
VARS-217ENST00000440048 EYA4O95677 639 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms