RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 SLC12A1Q13621 1099 aa12.99□□□□□ -0.33
NEK1-201ENST00000439128 CROCCP2Q86T23 111 aa12.99□□□□□ -0.33
NEK1-201ENST00000439128 SIRT2Q8IXJ6 389 aa12.99□□□□□ -0.33
NEK1-201ENST00000439128 CCDC13Q8IYE1 715 aa12.99□□□□□ -0.33
NEK1-201ENST00000439128 GJB4Q9NTQ9 266 aa12.99□□□□□ -0.33
NEK1-201ENST00000439128 GINM1Q9NU53 330 aa12.99□□□□□ -0.33
NEK1-201ENST00000439128 ZKSCAN5Q9Y2L8 839 aa12.99□□□□□ -0.33
NEK1-201ENST00000439128 UNC13BO14795 1591 aa12.98□□□□□ -0.33
NEK1-201ENST00000439128 DIP2BQ9P265 1576 aa12.98□□□□□ -0.33
NEK1-201ENST00000439128 NR3C1P04150 777 aa12.98□□□□□ -0.33
NEK1-201ENST00000439128 ZNF131P52739 623 aa12.98□□□□□ -0.33
NEK1-201ENST00000439128 BACE1P56817 501 aa12.98□□□□□ -0.33
NEK1-201ENST00000439128 HDXQ7Z353 690 aa12.98□□□□□ -0.33
NEK1-201ENST00000439128 MROH8Q9H579 483 aa12.98□□□□□ -0.33
NEK1-201ENST00000439128 SAR1BQ9Y6B6 198 aa12.98□□□□□ -0.33
NEK1-201ENST00000439128 NECTIN1Q15223 517 aa12.98□□□□□ -0.33
NEK1-201ENST00000439128 LINC00301Q8NCQ3 95 aa12.98□□□□□ -0.33
NEK1-201ENST00000439128 BBOF1Q8ND07 529 aa12.98□□□□□ -0.33
NEK1-201ENST00000439128 CDC26Q8NHZ8 85 aa12.98□□□□□ -0.33
NEK1-201ENST00000439128 TNIP3Q96KP6 325 aa12.98□□□□□ -0.33
NEK1-201ENST00000439128 POLRMTO00411 1230 aaKnown RBP12.98□□□□□ -0.33
NEK1-201ENST00000439128 ZBED1O96006 694 aa12.98□□□□□ -0.33
NEK1-201ENST00000439128 GUCY2FP51841 1108 aa12.98□□□□□ -0.33
NEK1-201ENST00000439128 MTMR3Q13615 1198 aa12.98□□□□□ -0.33
NEK1-201ENST00000439128 UNC13DQ70J99 1090 aa12.98□□□□□ -0.33
NEK1-201ENST00000439128 SEPT8Q92599 483 aa12.98□□□□□ -0.33
NEK1-201ENST00000439128 FAM8A1Q9UBU6 413 aa12.98□□□□□ -0.33
NEK1-201ENST00000439128 PI4K2BG5E9Z4 385 aa12.98□□□□□ -0.33
NEK1-201ENST00000439128 TMEM35BQ8NCS4 154 aa12.98□□□□□ -0.33
NEK1-201ENST00000439128 HMX1Q9NP08 348 aaPredicted RBP12.98□□□□□ -0.33
NEK1-201ENST00000439128 CPS1P31327 1500 aa12.98□□□□□ -0.33
NEK1-201ENST00000439128 PASKQ96RG2 1323 aa12.98□□□□□ -0.33
NEK1-201ENST00000439128 SNX17Q15036 470 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 BZW1Q7L1Q6 419 aaKnown RBP12.97□□□□□ -0.33
NEK1-201ENST00000439128 TRMT2AQ8IZ69 625 aaKnown RBP12.97□□□□□ -0.33
NEK1-201ENST00000439128 CARD6Q9BX69 1037 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 FSD1LQ9BXM9 530 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 RGL1Q9NZL6 768 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 HACD3Q9P035 362 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 DDX41Q9UJV9 622 aaKnown RBP12.97□□□□□ -0.33
NEK1-201ENST00000439128 AGAP1Q9UPQ3 857 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 PPRC1Q5VV67 1664 aaKnown RBP12.97□□□□□ -0.33
NEK1-201ENST00000439128 CHADLQ6NUI6 762 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 UHMK1Q8TAS1 419 aaKnown RBP12.97□□□□□ -0.33
NEK1-201ENST00000439128 SLC38A7Q9NVC3 462 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 RWDD2AQ9UIY3 292 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 MADDQ8WXG6 1647 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 DCCP43146 1447 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 HBP1O60381 514 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 PPFIA4O75335 1185 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 CASP14P31944 242 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 INPP5BP32019 993 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 TCF7P36402 384 aaPredicted RBP12.97□□□□□ -0.33
NEK1-201ENST00000439128 LRRC63Q05C16 580 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 COASYQ13057 564 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 DUOXA2Q1HG44 320 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 KSR1Q8IVT5 923 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 CDCA5Q96FF9 252 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 TAAR1Q96RJ0 339 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 RSPH14Q9UHP6 348 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 LAMC1P11047 1609 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 MMP14P50281 582 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 SGO2Q562F6 1265 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 LMBRD2Q68DH5 695 aaPredicted RBP12.97□□□□□ -0.33
NEK1-201ENST00000439128 FBXO16Q8IX29 292 aaPredicted RBP12.97□□□□□ -0.33
NEK1-201ENST00000439128 MB21D2Q8IYB1 491 aaPredicted RBP12.97□□□□□ -0.33
NEK1-201ENST00000439128 SHCBP1Q8NEM2 672 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 NUDCD1Q96RS6 583 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 PPME1Q9Y570 386 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 SCINQ9Y6U3 715 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 GPR75-ASB3A0A0A6YYF3 556 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 ASMTLO95671 621 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 VAMP7P51809 220 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 PRKCEQ02156 737 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 EMC2Q15006 297 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 PPP2R5EQ16537 467 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 STKLD1Q8NE28 680 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 ADAM22Q9P0K1 906 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 SNX9Q9Y5X1 595 aa12.97□□□□□ -0.33
NEK1-201ENST00000439128 MST1RQ04912 1400 aa12.96□□□□□ -0.33
NEK1-201ENST00000439128 CASP2P42575 452 aa12.96□□□□□ -0.33
NEK1-201ENST00000439128 RABL6Q3YEC7 729 aaPredicted RBP12.96□□□□□ -0.33
NEK1-201ENST00000439128 CEP85LQ5SZL2 805 aa12.96□□□□□ -0.33
NEK1-201ENST00000439128 COLEC11Q9BWP8 271 aa12.96□□□□□ -0.33
NEK1-201ENST00000439128 ASNSD1Q9NWL6 643 aa12.96□□□□□ -0.33
NEK1-201ENST00000439128 KLHL8Q9P2G9 620 aaPredicted RBP12.96□□□□□ -0.33
NEK1-201ENST00000439128 PLSCR1O15162 318 aa12.96□□□□□ -0.33
NEK1-201ENST00000439128 DGAT1O75907 488 aa12.96□□□□□ -0.33
NEK1-201ENST00000439128 INHBAP08476 426 aa12.96□□□□□ -0.33
NEK1-201ENST00000439128 CA4P22748 312 aa12.96□□□□□ -0.33
NEK1-201ENST00000439128 TBXAS1P24557 533 aaPredicted RBP12.96□□□□□ -0.33
NEK1-201ENST00000439128 CDC27P30260 824 aa12.96□□□□□ -0.33
NEK1-201ENST00000439128 SBK1Q52WX2 424 aa12.96□□□□□ -0.33
NEK1-201ENST00000439128 RNF217Q8TC41 542 aa12.96□□□□□ -0.33
NEK1-201ENST00000439128 SPATA17Q96L03 361 aa12.96□□□□□ -0.33
NEK1-201ENST00000439128 LMBRD1Q9NUN5 540 aa12.96□□□□□ -0.33
NEK1-201ENST00000439128 DNAJC12Q9UKB3 198 aa12.96□□□□□ -0.33
NEK1-201ENST00000439128 IKBKBO14920 756 aa12.96□□□□□ -0.33
NEK1-201ENST00000439128 GPR182O15218 404 aa12.96□□□□□ -0.33
NEK1-201ENST00000439128 LARGE1O95461 756 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms