RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 KLHL23Q8NBE8 558 aa20.42■□□□□ 0.86
HMGN1-207ENST00000436324 TCP11Q8WWU5 503 aa20.42■□□□□ 0.86
HMGN1-207ENST00000436324 PLVAPQ9BX97 442 aa20.42■□□□□ 0.86
HMGN1-207ENST00000436324 ANKEF1Q9NU02 776 aa20.42■□□□□ 0.86
HMGN1-207ENST00000436324 PIN4Q9Y237 131 aaKnown RBP20.42■□□□□ 0.86
HMGN1-207ENST00000436324 EYSQ5T1H1 3165 aa20.42■□□□□ 0.86
HMGN1-207ENST00000436324 MED24O75448 989 aa20.41■□□□□ 0.86
HMGN1-207ENST00000436324 SPATA31C1P0DKV0 1188 aa20.41■□□□□ 0.86
HMGN1-207ENST00000436324 U2AF2P26368 475 aaKnown RBP eCLIP20.41■□□□□ 0.868e-8■■■■■ 35
HMGN1-207ENST00000436324 TRAPPC10P48553 1259 aa20.41■□□□□ 0.86
HMGN1-207ENST00000436324 AAK1Q2M2I8 961 aa20.41■□□□□ 0.86
HMGN1-207ENST00000436324 TWF2Q6IBS0 349 aaKnown RBP20.41■□□□□ 0.86
HMGN1-207ENST00000436324 FERMT3Q86UX7 667 aa20.41■□□□□ 0.86
HMGN1-207ENST00000436324 IFT122Q9HBG6 1241 aa20.41■□□□□ 0.86
HMGN1-207ENST00000436324 XPNPEP1Q9NQW7 623 aa20.41■□□□□ 0.86
HMGN1-207ENST00000436324 RNF19AQ9NV58 838 aa20.41■□□□□ 0.86
HMGN1-207ENST00000436324 TYW1Q9NV66 732 aaKnown RBP20.41■□□□□ 0.86
HMGN1-207ENST00000436324 DACT1Q9NYF0 836 aa20.41■□□□□ 0.86
HMGN1-207ENST00000436324 PLAGL2Q9UPG8 496 aa20.41■□□□□ 0.86
HMGN1-207ENST00000436324 NLRC5Q86WI3 1866 aa20.41■□□□□ 0.86
HMGN1-207ENST00000436324 ITGB1P05556 798 aa20.4■□□□□ 0.86
HMGN1-207ENST00000436324 MCM2P49736 904 aa20.4■□□□□ 0.86
HMGN1-207ENST00000436324 TOB1P50616 345 aaPredicted RBP20.4■□□□□ 0.86
HMGN1-207ENST00000436324 ORC2Q13416 577 aaPredicted RBP20.4■□□□□ 0.86
HMGN1-207ENST00000436324 LONRF3Q496Y0 759 aa20.4■□□□□ 0.86
HMGN1-207ENST00000436324 EP400NLQ6ZTU2 488 aa20.4■□□□□ 0.86
HMGN1-207ENST00000436324 CATSPER3Q86XQ3 398 aa20.4■□□□□ 0.86
HMGN1-207ENST00000436324 ABI1Q8IZP0 508 aa20.4■□□□□ 0.86
HMGN1-207ENST00000436324 RNF149Q8NC42 400 aa20.4■□□□□ 0.86
HMGN1-207ENST00000436324 CASD1Q96PB1 797 aa20.4■□□□□ 0.86
HMGN1-207ENST00000436324 TMEM117Q9H0C3 514 aa20.4■□□□□ 0.86
HMGN1-207ENST00000436324 LMAN2LQ9H0V9 348 aa20.4■□□□□ 0.86
HMGN1-207ENST00000436324 NSUN3Q9H649 340 aaKnown RBP20.4■□□□□ 0.86
HMGN1-207ENST00000436324 MINDY3Q9H8M7 445 aa20.4■□□□□ 0.86
HMGN1-207ENST00000436324 CHST12Q9NRB3 414 aa20.4■□□□□ 0.86
HMGN1-207ENST00000436324 SMC3Q9UQE7 1217 aa20.4■□□□□ 0.86
HMGN1-207ENST00000436324 PCDHB6Q9Y5E3 794 aa20.4■□□□□ 0.86
HMGN1-207ENST00000436324 A0A0U1RQF3 1178 aa20.39■□□□□ 0.85
HMGN1-207ENST00000436324 H3BQV1 296 aa20.39■□□□□ 0.85
HMGN1-207ENST00000436324 GAS2O43903 313 aaKnown RBP20.39■□□□□ 0.85
HMGN1-207ENST00000436324 USO1O60763 962 aaKnown RBP20.39■□□□□ 0.85
HMGN1-207ENST00000436324 RARRES1P49788 294 aa20.39■□□□□ 0.85
HMGN1-207ENST00000436324 MAEAQ7L5Y9 396 aa20.39■□□□□ 0.85
HMGN1-207ENST00000436324 C4orf32Q8N8J7 132 aa20.39■□□□□ 0.85
HMGN1-207ENST00000436324 ERMNQ8TAM6 284 aa20.39■□□□□ 0.85
HMGN1-207ENST00000436324 SPPL3Q8TCT6 385 aa20.39■□□□□ 0.85
HMGN1-207ENST00000436324 ADAMTS19Q8TE59 1207 aa20.39■□□□□ 0.85
HMGN1-207ENST00000436324 P2RX5Q93086 422 aa20.39■□□□□ 0.85
HMGN1-207ENST00000436324 UBE2ZQ9H832 354 aaPredicted RBP20.39■□□□□ 0.85
HMGN1-207ENST00000436324 TUFT1Q9NNX1 390 aa20.39■□□□□ 0.85
HMGN1-207ENST00000436324 PCDHB12Q9Y5F1 795 aa20.39■□□□□ 0.85
HMGN1-207ENST00000436324 RALGAPA2Q2PPJ7 1873 aa20.39■□□□□ 0.85
HMGN1-207ENST00000436324 ASAP2O43150 1006 aa20.38■□□□□ 0.85
HMGN1-207ENST00000436324 HOXA2O43364 376 aa20.38■□□□□ 0.85
HMGN1-207ENST00000436324 DGAT1O75907 488 aa20.38■□□□□ 0.85
HMGN1-207ENST00000436324 ATF7P17544 494 aaPredicted RBP20.38■□□□□ 0.85
HMGN1-207ENST00000436324 DNAJB1P25685 340 aa20.38■□□□□ 0.85
HMGN1-207ENST00000436324 NAALADL2Q58DX5 795 aa20.38■□□□□ 0.85
HMGN1-207ENST00000436324 CLLU1OSQ5K130 101 aa20.38■□□□□ 0.85
HMGN1-207ENST00000436324 POTEGQ6S5H5 508 aa20.38■□□□□ 0.85
HMGN1-207ENST00000436324 SRGAP1Q7Z6B7 1085 aa20.38■□□□□ 0.85
HMGN1-207ENST00000436324 ZNF598Q86UK7 904 aaKnown RBP20.38■□□□□ 0.85
HMGN1-207ENST00000436324 COLGALT1Q8NBJ5 622 aa20.38■□□□□ 0.85
HMGN1-207ENST00000436324 HELQQ8TDG4 1101 aa20.38■□□□□ 0.85
HMGN1-207ENST00000436324 ASAP3Q8TDY4 903 aa20.38■□□□□ 0.85
HMGN1-207ENST00000436324 LPPQ93052 612 aa20.38■□□□□ 0.85
HMGN1-207ENST00000436324 POLR3CQ9BUI4 534 aaPredicted RBP20.38■□□□□ 0.85
HMGN1-207ENST00000436324 CWH43Q9H720 699 aa20.38■□□□□ 0.85
HMGN1-207ENST00000436324 AAASQ9NRG9 546 aa20.38■□□□□ 0.85
HMGN1-207ENST00000436324 BMP1P13497 986 aa20.37■□□□□ 0.85
HMGN1-207ENST00000436324 KCNA5P22460 613 aa20.37■□□□□ 0.85
HMGN1-207ENST00000436324 PHKA2P46019 1235 aa20.37■□□□□ 0.85
HMGN1-207ENST00000436324 PTGDRQ13258 359 aa20.37■□□□□ 0.85
HMGN1-207ENST00000436324 CAMK1Q14012 370 aa20.37■□□□□ 0.85
HMGN1-207ENST00000436324 LRRC55Q6ZSA7 311 aa20.37■□□□□ 0.85
HMGN1-207ENST00000436324 THNSL1Q8IYQ7 743 aa20.37■□□□□ 0.85
HMGN1-207ENST00000436324 POF1BQ8WVV4 589 aa20.37■□□□□ 0.85
HMGN1-207ENST00000436324 NECAB3Q96P71 396 aaPredicted RBP20.37■□□□□ 0.85
HMGN1-207ENST00000436324 POLR3FQ9H1D9 316 aaPredicted RBP20.37■□□□□ 0.85
HMGN1-207ENST00000436324 IGFLR1Q9H665 355 aa20.37■□□□□ 0.85
HMGN1-207ENST00000436324 PRUNE2Q8WUY3 3088 aa20.37■□□□□ 0.85
HMGN1-207ENST00000436324 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.36■□□□□ 0.85
HMGN1-207ENST00000436324 EOMESO95936 686 aa20.36■□□□□ 0.85
HMGN1-207ENST00000436324 XRCC6P12956 609 aaKnown RBP eCLIP20.36■□□□□ 0.85
HMGN1-207ENST00000436324 ARL2P36404 184 aa20.36■□□□□ 0.85
HMGN1-207ENST00000436324 CCT6AP40227 531 aaKnown RBP20.36■□□□□ 0.85
HMGN1-207ENST00000436324 MXD4Q14582 209 aaPredicted RBP20.36■□□□□ 0.85
HMGN1-207ENST00000436324 NACC1Q96RE7 527 aa20.36■□□□□ 0.85
HMGN1-207ENST00000436324 UHRF1Q96T88 793 aaPredicted RBP20.36■□□□□ 0.85
HMGN1-207ENST00000436324 BACH2Q9BYV9 841 aa20.36■□□□□ 0.85
HMGN1-207ENST00000436324 GPRC5CQ9NQ84 441 aa20.36■□□□□ 0.85
HMGN1-207ENST00000436324 AGPAT5Q9NUQ2 364 aa20.36■□□□□ 0.85
HMGN1-207ENST00000436324 FAM105AQ9NUU6 356 aa20.36■□□□□ 0.85
HMGN1-207ENST00000436324 LRWD1Q9UFC0 647 aa20.36■□□□□ 0.85
HMGN1-207ENST00000436324 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.36■□□□□ 0.85
HMGN1-207ENST00000436324 FGF18O76093 207 aa20.35■□□□□ 0.85
HMGN1-207ENST00000436324 LAG3P18627 525 aa20.35■□□□□ 0.85
HMGN1-207ENST00000436324 GLRA2P23416 452 aa20.35■□□□□ 0.85
HMGN1-207ENST00000436324 RPA1P27694 616 aa20.35■□□□□ 0.85
HMGN1-207ENST00000436324 HOXD11P31277 338 aaPredicted RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms