RNA–Protein interactions for RNA: ENST00000436216.1

EXT1-202, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 3

Gene EXT1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-202ENST00000436216 SCLT1Q96NL6 688 aa13.82□□□□□ -0.2
EXT1-202ENST00000436216 NACC1Q96RE7 527 aa13.82□□□□□ -0.2
EXT1-202ENST00000436216 DBR1Q9UK59 544 aaKnown RBP13.82□□□□□ -0.2
EXT1-202ENST00000436216 LRFN2Q9ULH4 789 aa13.82□□□□□ -0.2
EXT1-202ENST00000436216 MUC3AQ02505 3323 aa13.81□□□□□ -0.2
EXT1-202ENST00000436216 NLRC5Q86WI3 1866 aa13.81□□□□□ -0.2
EXT1-202ENST00000436216 A0A087WWV3 80 aa13.81□□□□□ -0.2
EXT1-202ENST00000436216 H3BQV1 296 aa13.81□□□□□ -0.2
EXT1-202ENST00000436216 EOMESO95936 686 aa13.81□□□□□ -0.2
EXT1-202ENST00000436216 SFPQP23246 707 aaKnown RBP eCLIP13.81□□□□□ -0.23e-6■■■□□ 17.1
EXT1-202ENST00000436216 ARL2P36404 184 aa13.81□□□□□ -0.2
EXT1-202ENST00000436216 GATMP50440 423 aa13.81□□□□□ -0.2
EXT1-202ENST00000436216 POU5F1BQ06416 359 aa13.81□□□□□ -0.2
EXT1-202ENST00000436216 MXD4Q14582 209 aaPredicted RBP13.81□□□□□ -0.2
EXT1-202ENST00000436216 IL17AQ16552 155 aa13.81□□□□□ -0.2
EXT1-202ENST00000436216 MCTP1Q6DN14 999 aa13.81□□□□□ -0.2
EXT1-202ENST00000436216 SRGAP1Q7Z6B7 1085 aa13.81□□□□□ -0.2
EXT1-202ENST00000436216 ZNF598Q86UK7 904 aaKnown RBP13.81□□□□□ -0.2
EXT1-202ENST00000436216 ECHDC2Q86YB7 292 aa13.81□□□□□ -0.2
EXT1-202ENST00000436216 PPM1EQ8WY54 764 aa13.81□□□□□ -0.2
EXT1-202ENST00000436216 MRPL38Q96DV4 380 aaKnown RBP13.81□□□□□ -0.2
EXT1-202ENST00000436216 NLRP4Q96MN2 994 aa13.81□□□□□ -0.2
EXT1-202ENST00000436216 MTRQ99707 1265 aa13.81□□□□□ -0.2
EXT1-202ENST00000436216 PLVAPQ9BX97 442 aa13.81□□□□□ -0.2
EXT1-202ENST00000436216 ATP6V0A4Q9HBG4 840 aa13.81□□□□□ -0.2
EXT1-202ENST00000436216 PRDM6Q9NQX0 595 aa13.81□□□□□ -0.2
EXT1-202ENST00000436216 RNF19AQ9NV58 838 aa13.81□□□□□ -0.2
EXT1-202ENST00000436216 MRPL42Q9Y6G3 142 aaKnown RBP13.81□□□□□ -0.2
EXT1-202ENST00000436216 ATP2C1P98194 919 aaPredicted RBP13.8□□□□□ -0.2
EXT1-202ENST00000436216 GPM6BQ13491 265 aa13.8□□□□□ -0.2
EXT1-202ENST00000436216 ECM1Q16610 540 aa13.8□□□□□ -0.2
EXT1-202ENST00000436216 NAALADL2Q58DX5 795 aa13.8□□□□□ -0.2
EXT1-202ENST00000436216 FAM102BQ5T8I3 360 aa13.8□□□□□ -0.2
EXT1-202ENST00000436216 IFNLR1Q8IU57 520 aaPredicted RBP13.8□□□□□ -0.2
EXT1-202ENST00000436216 ERMNQ8TAM6 284 aa13.8□□□□□ -0.2
EXT1-202ENST00000436216 P2RX5Q93086 422 aa13.8□□□□□ -0.2
EXT1-202ENST00000436216 INTS4Q96HW7 963 aaKnown RBP13.8□□□□□ -0.2
EXT1-202ENST00000436216 NFKBIZQ9BYH8 718 aa13.8□□□□□ -0.2
EXT1-202ENST00000436216 MINDY3Q9H8M7 445 aa13.8□□□□□ -0.2
EXT1-202ENST00000436216 BMP2KQ9NSY1 1161 aaPredicted RBP13.8□□□□□ -0.2
EXT1-202ENST00000436216 DACT1Q9NYF0 836 aa13.8□□□□□ -0.2
EXT1-202ENST00000436216 LRWD1Q9UFC0 647 aa13.8□□□□□ -0.2
EXT1-202ENST00000436216 STK24Q9Y6E0 443 aa13.8□□□□□ -0.2
EXT1-202ENST00000436216 FNDC1Q4ZHG4 1894 aaPredicted RBP13.8□□□□□ -0.2
EXT1-202ENST00000436216 HOXA2O43364 376 aa13.79□□□□□ -0.2
EXT1-202ENST00000436216 ZNF623O75123 536 aa13.79□□□□□ -0.2
EXT1-202ENST00000436216 SRGAP2CP0DJJ0 459 aa13.79□□□□□ -0.2
EXT1-202ENST00000436216 ATF7P17544 494 aaPredicted RBP13.79□□□□□ -0.2
EXT1-202ENST00000436216 HOXA11P31270 313 aaPredicted RBP13.79□□□□□ -0.2
EXT1-202ENST00000436216 CTNNB1P35222 781 aa13.79□□□□□ -0.2
EXT1-202ENST00000436216 PTENP60484 403 aa13.79□□□□□ -0.2
EXT1-202ENST00000436216 PCBP1Q15365 356 aaKnown RBP eCLIP13.79□□□□□ -0.2
EXT1-202ENST00000436216 HAUS3Q68CZ6 603 aa13.79□□□□□ -0.2
EXT1-202ENST00000436216 MICALL1Q8N3F8 863 aa13.79□□□□□ -0.2
EXT1-202ENST00000436216 RNF149Q8NC42 400 aa13.79□□□□□ -0.2
EXT1-202ENST00000436216 ATXN2LQ8WWM7 1075 aaKnown RBP13.79□□□□□ -0.2
EXT1-202ENST00000436216 CASD1Q96PB1 797 aa13.79□□□□□ -0.2
EXT1-202ENST00000436216 C11orf84Q9BUA3 381 aaPredicted RBP13.79□□□□□ -0.2
EXT1-202ENST00000436216 RAB34Q9BZG1 259 aa13.79□□□□□ -0.2
EXT1-202ENST00000436216 TMEM117Q9H0C3 514 aa13.79□□□□□ -0.2
EXT1-202ENST00000436216 LMAN2LQ9H0V9 348 aa13.79□□□□□ -0.2
EXT1-202ENST00000436216 AGPAT5Q9NUQ2 364 aa13.79□□□□□ -0.2
EXT1-202ENST00000436216 FGFR1P11362 822 aa13.78□□□□□ -0.2
EXT1-202ENST00000436216 PDCP20941 246 aa13.78□□□□□ -0.2
EXT1-202ENST00000436216 GLRA2P23416 452 aa13.78□□□□□ -0.2
EXT1-202ENST00000436216 CCT6AP40227 531 aaKnown RBP13.78□□□□□ -0.2
EXT1-202ENST00000436216 PHKA2P46019 1235 aa13.78□□□□□ -0.2
EXT1-202ENST00000436216 PTPROQ16827 1216 aa13.78□□□□□ -0.2
EXT1-202ENST00000436216 PAN2Q504Q3 1202 aaKnown RBP13.78□□□□□ -0.2
EXT1-202ENST00000436216 POTEGQ6S5H5 508 aa13.78□□□□□ -0.2
EXT1-202ENST00000436216 DTHD1Q6ZMT9 781 aa13.78□□□□□ -0.2
EXT1-202ENST00000436216 CATSPER4Q7RTX7 472 aa13.78□□□□□ -0.2
EXT1-202ENST00000436216 BRAPQ7Z569 592 aa13.78□□□□□ -0.2
EXT1-202ENST00000436216 MCPH1Q8NEM0 835 aa13.78□□□□□ -0.2
EXT1-202ENST00000436216 ASAP3Q8TDY4 903 aa13.78□□□□□ -0.2
EXT1-202ENST00000436216 SNX21Q969T3 373 aa13.78□□□□□ -0.2
EXT1-202ENST00000436216 MMTAG2Q9BU76 263 aaKnown RBP13.78□□□□□ -0.2
EXT1-202ENST00000436216 CWH43Q9H720 699 aa13.78□□□□□ -0.2
EXT1-202ENST00000436216 TYW1Q9NV66 732 aaKnown RBP13.78□□□□□ -0.2
EXT1-202ENST00000436216 THEGQ9P2T0 379 aa13.78□□□□□ -0.2
EXT1-202ENST00000436216 TBKBP1A7MCY6 615 aa13.77□□□□□ -0.21
EXT1-202ENST00000436216 GRM6O15303 877 aa13.77□□□□□ -0.21
EXT1-202ENST00000436216 USO1O60763 962 aaKnown RBP13.77□□□□□ -0.21
EXT1-202ENST00000436216 SKIP12755 728 aa13.77□□□□□ -0.21
EXT1-202ENST00000436216 CYP11B2P19099 503 aa13.77□□□□□ -0.21
EXT1-202ENST00000436216 CAPSQ13938 189 aa13.77□□□□□ -0.21
EXT1-202ENST00000436216 CAMK1Q14012 370 aa13.77□□□□□ -0.21
EXT1-202ENST00000436216 TFDP1Q14186 410 aa13.77□□□□□ -0.21
EXT1-202ENST00000436216 CLLU1OSQ5K130 101 aa13.77□□□□□ -0.21
EXT1-202ENST00000436216 ARL6IP4Q66PJ3 421 aaKnown RBP13.77□□□□□ -0.21
EXT1-202ENST00000436216 LRRC55Q6ZSA7 311 aa13.77□□□□□ -0.21
EXT1-202ENST00000436216 RSPH1Q8WYR4 309 aa13.77□□□□□ -0.21
EXT1-202ENST00000436216 CCDC43Q96MW1 224 aaKnown RBP13.77□□□□□ -0.21
EXT1-202ENST00000436216 FAM105AQ9NUU6 356 aa13.77□□□□□ -0.21
EXT1-202ENST00000436216 COG5Q9UP83 839 aa13.77□□□□□ -0.21
EXT1-202ENST00000436216 PLAGL2Q9UPG8 496 aa13.77□□□□□ -0.21
EXT1-202ENST00000436216 PIN4Q9Y237 131 aaKnown RBP13.77□□□□□ -0.21
EXT1-202ENST00000436216 KIAA1671Q9BY89 1806 aa13.76□□□□□ -0.21
EXT1-202ENST00000436216 ARHGEF35A5YM69 484 aa13.76□□□□□ -0.21
EXT1-202ENST00000436216 PP2D1A8MPX8 630 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms