RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 FOXD4L5Q5VV16 416 aaPredicted RBP20.41■□□□□ 0.86
HLA-F-220ENST00000434407 ATL3Q6DD88 541 aa20.41■□□□□ 0.86
HLA-F-220ENST00000434407 SRGAP1Q7Z6B7 1085 aa20.41■□□□□ 0.86
HLA-F-220ENST00000434407 CABP7Q86V35 215 aa20.41■□□□□ 0.86
HLA-F-220ENST00000434407 ASAP3Q8TDY4 903 aa20.41■□□□□ 0.86
HLA-F-220ENST00000434407 FOXD4L4Q8WXT5 416 aaPredicted RBP20.41■□□□□ 0.86
HLA-F-220ENST00000434407 NLRP4Q96MN2 994 aa20.41■□□□□ 0.86
HLA-F-220ENST00000434407 SCLT1Q96NL6 688 aa20.41■□□□□ 0.86
HLA-F-220ENST00000434407 CCSER1Q9C0I3 900 aa20.41■□□□□ 0.86
HLA-F-220ENST00000434407 SEMA6BQ9H3T3 888 aa20.41■□□□□ 0.86
HLA-F-220ENST00000434407 RGS18Q9NS28 235 aa20.41■□□□□ 0.86
HLA-F-220ENST00000434407 TLL1O43897 1013 aa20.4■□□□□ 0.86
HLA-F-220ENST00000434407 CSDE1O75534 798 aaKnown RBP20.4■□□□□ 0.86
HLA-F-220ENST00000434407 YEATS4O95619 227 aa20.4■□□□□ 0.86
HLA-F-220ENST00000434407 GLRA2P23416 452 aa20.4■□□□□ 0.86
HLA-F-220ENST00000434407 UBA7P41226 1012 aa20.4■□□□□ 0.86
HLA-F-220ENST00000434407 COL4A6Q14031 1691 aa20.4■□□□□ 0.86
HLA-F-220ENST00000434407 ZNF697Q5TEC3 545 aa20.4■□□□□ 0.86
HLA-F-220ENST00000434407 Q7L0L9 218 aa20.4■□□□□ 0.86
HLA-F-220ENST00000434407 RNF149Q8NC42 400 aa20.4■□□□□ 0.86
HLA-F-220ENST00000434407 NFKBIZQ9BYH8 718 aa20.4■□□□□ 0.86
HLA-F-220ENST00000434407 CSRNP2Q9H175 543 aa20.4■□□□□ 0.86
HLA-F-220ENST00000434407 POLR3FQ9H1D9 316 aaPredicted RBP20.4■□□□□ 0.86
HLA-F-220ENST00000434407 NKX2-4Q9H2Z4 354 aa20.4■□□□□ 0.86
HLA-F-220ENST00000434407 C9IYK1 514 aa20.39■□□□□ 0.85
HLA-F-220ENST00000434407 SRGAP2CP0DJJ0 459 aa20.39■□□□□ 0.85
HLA-F-220ENST00000434407 SFPQP23246 707 aaKnown RBP eCLIP20.39■□□□□ 0.85
HLA-F-220ENST00000434407 PTENP60484 403 aa20.39■□□□□ 0.85
HLA-F-220ENST00000434407 FAM189BP81408 668 aa20.39■□□□□ 0.85
HLA-F-220ENST00000434407 CAPSQ13938 189 aa20.39■□□□□ 0.85
HLA-F-220ENST00000434407 C1orf186Q6ZWK4 172 aa20.39■□□□□ 0.85
HLA-F-220ENST00000434407 DEFB123Q8N688 67 aa20.39■□□□□ 0.85
HLA-F-220ENST00000434407 SP7Q8TDD2 431 aaPredicted RBP20.39■□□□□ 0.85
HLA-F-220ENST00000434407 LRRC15Q8TF66 581 aa20.39■□□□□ 0.85
HLA-F-220ENST00000434407 CLIC6Q96NY7 704 aa20.39■□□□□ 0.85
HLA-F-220ENST00000434407 ADAM2Q99965 735 aa20.39■□□□□ 0.85
HLA-F-220ENST00000434407 ZNF576Q9H609 170 aa20.39■□□□□ 0.85
HLA-F-220ENST00000434407 MINDY3Q9H8M7 445 aa20.39■□□□□ 0.85
HLA-F-220ENST00000434407 RC3H2Q9HBD1 1191 aaKnown RBP20.39■□□□□ 0.85
HLA-F-220ENST00000434407 GPRC5CQ9NQ84 441 aa20.39■□□□□ 0.85
HLA-F-220ENST00000434407 C1orf112Q9NSG2 853 aa20.39■□□□□ 0.85
HLA-F-220ENST00000434407 MTMR10Q9NXD2 777 aa20.39■□□□□ 0.85
HLA-F-220ENST00000434407 TFIP11Q9UBB9 837 aaKnown RBP20.39■□□□□ 0.85
HLA-F-220ENST00000434407 INSL6Q9Y581 213 aa20.39■□□□□ 0.85
HLA-F-220ENST00000434407 FNDC1Q4ZHG4 1894 aaPredicted RBP20.39■□□□□ 0.85
HLA-F-220ENST00000434407 PPP6R2O75170 966 aa20.38■□□□□ 0.85
HLA-F-220ENST00000434407 CA3P07451 260 aa20.38■□□□□ 0.85
HLA-F-220ENST00000434407 FGFR4P22455 802 aa20.38■□□□□ 0.85
HLA-F-220ENST00000434407 SARSP49591 514 aaKnown RBP20.38■□□□□ 0.85
HLA-F-220ENST00000434407 SLC12A3P55017 1021 aa20.38■□□□□ 0.85
HLA-F-220ENST00000434407 TFDP1Q14186 410 aa20.38■□□□□ 0.85
HLA-F-220ENST00000434407 RINT1Q6NUQ1 792 aa20.38■□□□□ 0.85
HLA-F-220ENST00000434407 USP49Q70CQ1 688 aa20.38■□□□□ 0.85
HLA-F-220ENST00000434407 SLC24A5Q71RS6 500 aa20.38■□□□□ 0.85
HLA-F-220ENST00000434407 SYT2Q8N9I0 419 aaPredicted RBP20.38■□□□□ 0.85
HLA-F-220ENST00000434407 KRI1Q8N9T8 703 aaKnown RBP20.38■□□□□ 0.85
HLA-F-220ENST00000434407 CALML4Q96GE6 196 aa20.38■□□□□ 0.85
HLA-F-220ENST00000434407 ZBED2Q9BTP6 218 aa20.38■□□□□ 0.85
HLA-F-220ENST00000434407 CHST12Q9NRB3 414 aa20.38■□□□□ 0.85
HLA-F-220ENST00000434407 DENND3A2RUS2 1198 aa20.37■□□□□ 0.85
HLA-F-220ENST00000434407 LCHNA4D1U4 455 aa20.37■□□□□ 0.85
HLA-F-220ENST00000434407 SPTLC2O15270 562 aa20.37■□□□□ 0.85
HLA-F-220ENST00000434407 ARHGEF15O94989 841 aa20.37■□□□□ 0.85
HLA-F-220ENST00000434407 DDIT3P35638 169 aa20.37■□□□□ 0.85
HLA-F-220ENST00000434407 PHKA2P46019 1235 aa20.37■□□□□ 0.85
HLA-F-220ENST00000434407 STK38Q15208 465 aa20.37■□□□□ 0.85
HLA-F-220ENST00000434407 PCBP1Q15365 356 aaKnown RBP eCLIP20.37■□□□□ 0.85
HLA-F-220ENST00000434407 ZRSR1Q15695 479 aaKnown RBP20.37■□□□□ 0.85
HLA-F-220ENST00000434407 FAM102BQ5T8I3 360 aa20.37■□□□□ 0.85
HLA-F-220ENST00000434407 FAM117BQ6P1L5 589 aa20.37■□□□□ 0.85
HLA-F-220ENST00000434407 NPAS4Q8IUM7 802 aa20.37■□□□□ 0.85
HLA-F-220ENST00000434407 ZNF689Q96CS4 500 aaPredicted RBP20.37■□□□□ 0.85
HLA-F-220ENST00000434407 EPSTI1Q96J88 318 aa20.37■□□□□ 0.85
HLA-F-220ENST00000434407 CDK5RAP3Q96JB5 506 aa20.37■□□□□ 0.85
HLA-F-220ENST00000434407 PLIN2Q99541 437 aa20.37■□□□□ 0.85
HLA-F-220ENST00000434407 RUSC1Q9BVN2 902 aa20.37■□□□□ 0.85
HLA-F-220ENST00000434407 TRAIPQ9BWF2 469 aa20.37■□□□□ 0.85
HLA-F-220ENST00000434407 SLC28A3Q9HAS3 691 aa20.37■□□□□ 0.85
HLA-F-220ENST00000434407 BLOC1S4Q9NUP1 217 aa20.37■□□□□ 0.85
HLA-F-220ENST00000434407 UPP2O95045 317 aa20.36■□□□□ 0.85
HLA-F-220ENST00000434407 PLA2G4BP0C869 781 aa20.36■□□□□ 0.85
HLA-F-220ENST00000434407 PLCG1P19174 1290 aa20.36■□□□□ 0.85
HLA-F-220ENST00000434407 GUCY2CP25092 1073 aa20.36■□□□□ 0.85
HLA-F-220ENST00000434407 TAP1Q03518 808 aa20.36■□□□□ 0.85
HLA-F-220ENST00000434407 KARSQ15046 597 aaKnown RBP20.36■□□□□ 0.85
HLA-F-220ENST00000434407 SPECC1Q5M775 1068 aa20.36■□□□□ 0.85
HLA-F-220ENST00000434407 CDCA2Q69YH5 1023 aaPredicted RBP20.36■□□□□ 0.85
HLA-F-220ENST00000434407 MAEAQ7L5Y9 396 aa20.36■□□□□ 0.85
HLA-F-220ENST00000434407 BSNDQ8WZ55 320 aa20.36■□□□□ 0.85
HLA-F-220ENST00000434407 SYMPKQ92797 1274 aaKnown RBP20.36■□□□□ 0.85
HLA-F-220ENST00000434407 KIFAP3Q92845 792 aa20.36■□□□□ 0.85
HLA-F-220ENST00000434407 TIPINQ9BVW5 301 aa20.36■□□□□ 0.85
HLA-F-220ENST00000434407 ELAC1Q9H777 363 aaKnown RBP20.36■□□□□ 0.85
HLA-F-220ENST00000434407 KCND2Q9NZV8 630 aa20.36■□□□□ 0.85
HLA-F-220ENST00000434407 COL6A3P12111 3177 aa20.36■□□□□ 0.85
HLA-F-220ENST00000434407 NLRC5Q86WI3 1866 aa20.35■□□□□ 0.85
HLA-F-220ENST00000434407 DGKIO75912 1065 aa20.35■□□□□ 0.85
HLA-F-220ENST00000434407 STAG3L1P0CL83 205 aa20.35■□□□□ 0.85
HLA-F-220ENST00000434407 ZSCAN20P17040 1043 aaPredicted RBP20.35■□□□□ 0.85
HLA-F-220ENST00000434407 HOXA11P31270 313 aaPredicted RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms