RNA–Protein interactions for RNA: ENST00000429920.1

ATG9A-208, Transcript of autophagy related 9A, humanhuman

TSL 5

Gene ATG9A, Length 733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-208ENST00000429920 CHST12Q9NRB3 414 aa12.98□□□□□ -0.33
ATG9A-208ENST00000429920 TMEM161AQ9NX61 479 aa12.98□□□□□ -0.33
ATG9A-208ENST00000429920 DBR1Q9UK59 544 aaKnown RBP12.98□□□□□ -0.33
ATG9A-208ENST00000429920 KIAA1024Q9UPX6 916 aa12.98□□□□□ -0.33
ATG9A-208ENST00000429920 RWDD3Q9Y3V2 267 aa12.98□□□□□ -0.33
ATG9A-208ENST00000429920 EVPLQ92817 2033 aa12.98□□□□□ -0.33
ATG9A-208ENST00000429920 GBF1Q92538 1859 aa12.97□□□□□ -0.33
ATG9A-208ENST00000429920 ARHGEF35A5YM69 484 aa12.97□□□□□ -0.33
ATG9A-208ENST00000429920 TBKBP1A7MCY6 615 aa12.97□□□□□ -0.33
ATG9A-208ENST00000429920 RB1P06400 928 aa12.97□□□□□ -0.33
ATG9A-208ENST00000429920 FGFR1P11362 822 aa12.97□□□□□ -0.33
ATG9A-208ENST00000429920 CDC25AP30304 524 aa12.97□□□□□ -0.33
ATG9A-208ENST00000429920 CTNNB1P35222 781 aa12.97□□□□□ -0.33
ATG9A-208ENST00000429920 ARL2P36404 184 aa12.97□□□□□ -0.33
ATG9A-208ENST00000429920 GATMP50440 423 aa12.97□□□□□ -0.33
ATG9A-208ENST00000429920 NCBP1Q09161 790 aaKnown RBP12.97□□□□□ -0.33
ATG9A-208ENST00000429920 TFDP1Q14186 410 aa12.97□□□□□ -0.33
ATG9A-208ENST00000429920 SKIV2LQ15477 1246 aaKnown RBP12.97□□□□□ -0.33
ATG9A-208ENST00000429920 IL17AQ16552 155 aa12.97□□□□□ -0.33
ATG9A-208ENST00000429920 ECM1Q16610 540 aa12.97□□□□□ -0.33
ATG9A-208ENST00000429920 SPOUT1Q5T280 376 aaKnown RBP12.97□□□□□ -0.33
ATG9A-208ENST00000429920 BRAPQ7Z569 592 aa12.97□□□□□ -0.33
ATG9A-208ENST00000429920 ECHDC2Q86YB7 292 aa12.97□□□□□ -0.33
ATG9A-208ENST00000429920 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.97□□□□□ -0.33
ATG9A-208ENST00000429920 IGSF22Q8N9C0 903 aa12.97□□□□□ -0.33
ATG9A-208ENST00000429920 RC3H2Q9HBD1 1191 aaKnown RBP12.97□□□□□ -0.33
ATG9A-208ENST00000429920 LMCD1Q9NZU5 365 aa12.97□□□□□ -0.33
ATG9A-208ENST00000429920 PIN4Q9Y237 131 aaKnown RBP12.97□□□□□ -0.33
ATG9A-208ENST00000429920 MICAL3Q7RTP6 2002 aa12.96□□□□□ -0.33
ATG9A-208ENST00000429920 PTPRSQ13332 1948 aa12.96□□□□□ -0.33
ATG9A-208ENST00000429920 A0A0U1RQF3 1178 aa12.96□□□□□ -0.33
ATG9A-208ENST00000429920 PP2D1A8MPX8 630 aa12.96□□□□□ -0.33
ATG9A-208ENST00000429920 H3BNC9 293 aa12.96□□□□□ -0.33
ATG9A-208ENST00000429920 SYT1P21579 422 aa12.96□□□□□ -0.33
ATG9A-208ENST00000429920 PHKA2P46019 1235 aa12.96□□□□□ -0.33
ATG9A-208ENST00000429920 ATP2C1P98194 919 aaPredicted RBP12.96□□□□□ -0.33
ATG9A-208ENST00000429920 ZRSR1Q15695 479 aaKnown RBP12.96□□□□□ -0.33
ATG9A-208ENST00000429920 PTPROQ16827 1216 aa12.96□□□□□ -0.33
ATG9A-208ENST00000429920 TWF2Q6IBS0 349 aaKnown RBP12.96□□□□□ -0.33
ATG9A-208ENST00000429920 HSCBQ8IWL3 235 aa12.96□□□□□ -0.33
ATG9A-208ENST00000429920 ABI1Q8IZP0 508 aa12.96□□□□□ -0.33
ATG9A-208ENST00000429920 CLP1Q92989 425 aaKnown RBP12.96□□□□□ -0.33
ATG9A-208ENST00000429920 SNX21Q969T3 373 aa12.96□□□□□ -0.33
ATG9A-208ENST00000429920 POLR3FQ9H1D9 316 aaPredicted RBP12.96□□□□□ -0.33
ATG9A-208ENST00000429920 PRDM6Q9NQX0 595 aa12.96□□□□□ -0.33
ATG9A-208ENST00000429920 DDX19AQ9NUU7 478 aaKnown RBP12.96□□□□□ -0.33
ATG9A-208ENST00000429920 DNM3Q9UQ16 869 aa12.96□□□□□ -0.33
ATG9A-208ENST00000429920 MRPL42Q9Y6G3 142 aaKnown RBP12.96□□□□□ -0.33
ATG9A-208ENST00000429920 SIP14410 1827 aa12.96□□□□□ -0.33
ATG9A-208ENST00000429920 LAMA2P24043 3122 aaKnown RBP12.95□□□□□ -0.34
ATG9A-208ENST00000429920 VWA3AA6NCI4 1184 aa12.95□□□□□ -0.34
ATG9A-208ENST00000429920 INO80B-WBP1J3KQ70 363 aa12.95□□□□□ -0.34
ATG9A-208ENST00000429920 HOXA2O43364 376 aa12.95□□□□□ -0.34
ATG9A-208ENST00000429920 EOMESO95936 686 aa12.95□□□□□ -0.34
ATG9A-208ENST00000429920 HSP90AA1P07900 732 aaKnown RBP12.95□□□□□ -0.34
ATG9A-208ENST00000429920 SKIP12755 728 aa12.95□□□□□ -0.34
ATG9A-208ENST00000429920 CYP11B2P19099 503 aa12.95□□□□□ -0.34
ATG9A-208ENST00000429920 GLRA2P23416 452 aa12.95□□□□□ -0.34
ATG9A-208ENST00000429920 POU5F1BQ06416 359 aa12.95□□□□□ -0.34
ATG9A-208ENST00000429920 ARL6IP4Q66PJ3 421 aaKnown RBP12.95□□□□□ -0.34
ATG9A-208ENST00000429920 PADI6Q6TGC4 694 aa12.95□□□□□ -0.34
ATG9A-208ENST00000429920 MCPH1Q8NEM0 835 aa12.95□□□□□ -0.34
ATG9A-208ENST00000429920 ASAP3Q8TDY4 903 aa12.95□□□□□ -0.34
ATG9A-208ENST00000429920 C11orf84Q9BUA3 381 aaPredicted RBP12.95□□□□□ -0.34
ATG9A-208ENST00000429920 TMEM117Q9H0C3 514 aa12.95□□□□□ -0.34
ATG9A-208ENST00000429920 BHMT2Q9H2M3 363 aa12.95□□□□□ -0.34
ATG9A-208ENST00000429920 MINDY3Q9H8M7 445 aa12.95□□□□□ -0.34
ATG9A-208ENST00000429920 GPRC5CQ9NQ84 441 aa12.95□□□□□ -0.34
ATG9A-208ENST00000429920 TYW1Q9NV66 732 aaKnown RBP12.95□□□□□ -0.34
ATG9A-208ENST00000429920 E9PMD0 336 aa12.94□□□□□ -0.34
ATG9A-208ENST00000429920 C5orf67F2Z3F1 127 aa12.94□□□□□ -0.34
ATG9A-208ENST00000429920 ERLIN2O94905 339 aa12.94□□□□□ -0.34
ATG9A-208ENST00000429920 BMP15O95972 392 aa12.94□□□□□ -0.34
ATG9A-208ENST00000429920 PTENP60484 403 aa12.94□□□□□ -0.34
ATG9A-208ENST00000429920 CAPSQ13938 189 aa12.94□□□□□ -0.34
ATG9A-208ENST00000429920 SF3A1Q15459 793 aaKnown RBP12.94□□□□□ -0.34
ATG9A-208ENST00000429920 LONRF3Q496Y0 759 aa12.94□□□□□ -0.34
ATG9A-208ENST00000429920 MRPL38Q96DV4 380 aaKnown RBP12.94□□□□□ -0.34
ATG9A-208ENST00000429920 CASD1Q96PB1 797 aa12.94□□□□□ -0.34
ATG9A-208ENST00000429920 PLVAPQ9BX97 442 aa12.94□□□□□ -0.34
ATG9A-208ENST00000429920 ALG13Q9NP73 1137 aaKnown RBP12.94□□□□□ -0.34
ATG9A-208ENST00000429920 AAASQ9NRG9 546 aa12.94□□□□□ -0.34
ATG9A-208ENST00000429920 PCDHB12Q9Y5F1 795 aa12.94□□□□□ -0.34
ATG9A-208ENST00000429920 WDR81Q562E7 1941 aa12.94□□□□□ -0.34
ATG9A-208ENST00000429920 LRRIQ4A6NIV6 560 aa12.93□□□□□ -0.34
ATG9A-208ENST00000429920 GRM6O15303 877 aa12.93□□□□□ -0.34
ATG9A-208ENST00000429920 EYA4O95677 639 aa12.93□□□□□ -0.34
ATG9A-208ENST00000429920 LINC00271P0C7V0 271 aa12.93□□□□□ -0.34
ATG9A-208ENST00000429920 AXLP30530 894 aa12.93□□□□□ -0.34
ATG9A-208ENST00000429920 PCBP1Q15365 356 aaKnown RBP eCLIP12.93□□□□□ -0.34
ATG9A-208ENST00000429920 NAALADL2Q58DX5 795 aa12.93□□□□□ -0.34
ATG9A-208ENST00000429920 ZNF598Q86UK7 904 aaKnown RBP12.93□□□□□ -0.34
ATG9A-208ENST00000429920 HELQQ8TDG4 1101 aa12.93□□□□□ -0.34
ATG9A-208ENST00000429920 PGBD4Q96DM1 585 aa12.93□□□□□ -0.34
ATG9A-208ENST00000429920 CDK5RAP3Q96JB5 506 aa12.93□□□□□ -0.34
ATG9A-208ENST00000429920 PLIN2Q99541 437 aa12.93□□□□□ -0.34
ATG9A-208ENST00000429920 MMTAG2Q9BU76 263 aaKnown RBP12.93□□□□□ -0.34
ATG9A-208ENST00000429920 TRAIPQ9BWF2 469 aa12.93□□□□□ -0.34
ATG9A-208ENST00000429920 POLD4Q9HCU8 107 aa12.93□□□□□ -0.34
ATG9A-208ENST00000429920 AGPAT5Q9NUQ2 364 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms