RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 WDR91A4D1P6 747 aa13.58□□□□□ -0.23
CPNE4-201ENST00000429747 ITGA4P13612 1032 aa13.58□□□□□ -0.23
CPNE4-201ENST00000429747 MYO1EQ12965 1108 aa13.58□□□□□ -0.23
CPNE4-201ENST00000429747 MEI1Q5TIA1 1274 aa13.58□□□□□ -0.23
CPNE4-201ENST00000429747 ARHGEF16Q5VV41 709 aa13.58□□□□□ -0.23
CPNE4-201ENST00000429747 TRIM59Q8IWR1 403 aa13.58□□□□□ -0.23
CPNE4-201ENST00000429747 STK33Q9BYT3 514 aa13.58□□□□□ -0.23
CPNE4-201ENST00000429747 TDRD3Q9H7E2 651 aaKnown RBP13.58□□□□□ -0.23
CPNE4-201ENST00000429747 KMT5AQ9NQR1 393 aa13.58□□□□□ -0.23
CPNE4-201ENST00000429747 DBR1Q9UK59 544 aaKnown RBP13.58□□□□□ -0.23
CPNE4-201ENST00000429747 FMN2Q9NZ56 1722 aa13.58□□□□□ -0.24
CPNE4-201ENST00000429747 KRT19P08727 400 aa13.58□□□□□ -0.24
CPNE4-201ENST00000429747 BRAFP15056 766 aa13.58□□□□□ -0.24
CPNE4-201ENST00000429747 PON1P27169 355 aa13.58□□□□□ -0.24
CPNE4-201ENST00000429747 VAMP7P51809 220 aa13.58□□□□□ -0.24
CPNE4-201ENST00000429747 PRELPP51888 382 aa13.58□□□□□ -0.24
CPNE4-201ENST00000429747 BBOF1Q8ND07 529 aa13.58□□□□□ -0.24
CPNE4-201ENST00000429747 DEPTORQ8TB45 409 aa13.58□□□□□ -0.24
CPNE4-201ENST00000429747 RSAD2Q8WXG1 361 aa13.58□□□□□ -0.24
CPNE4-201ENST00000429747 PRMT1Q99873 361 aaKnown RBP13.58□□□□□ -0.24
CPNE4-201ENST00000429747 AGPAT1Q99943 283 aa13.58□□□□□ -0.24
CPNE4-201ENST00000429747 NCAPGQ9BPX3 1015 aa13.58□□□□□ -0.24
CPNE4-201ENST00000429747 CD248Q9HCU0 757 aa13.58□□□□□ -0.24
CPNE4-201ENST00000429747 EIF2AK2P19525 551 aaKnown RBP13.58□□□□□ -0.24
CPNE4-201ENST00000429747 MAN1A1P33908 653 aa13.58□□□□□ -0.24
CPNE4-201ENST00000429747 PIK3CAP42336 1068 aa13.58□□□□□ -0.24
CPNE4-201ENST00000429747 TTMPQ5BVD1 217 aa13.58□□□□□ -0.24
CPNE4-201ENST00000429747 HP1BP3Q5SSJ5 553 aaPredicted RBP13.58□□□□□ -0.24
CPNE4-201ENST00000429747 JAMLQ86YT9 394 aa13.58□□□□□ -0.24
CPNE4-201ENST00000429747 TBC1D16Q8TBP0 767 aa13.58□□□□□ -0.24
CPNE4-201ENST00000429747 LRRIQ4A6NIV6 560 aa13.57□□□□□ -0.24
CPNE4-201ENST00000429747 SLC16A4O15374 487 aa13.57□□□□□ -0.24
CPNE4-201ENST00000429747 DKC1O60832 514 aaKnown RBP eCLIP13.57□□□□□ -0.24
CPNE4-201ENST00000429747 ZBED4O75132 1171 aa13.57□□□□□ -0.24
CPNE4-201ENST00000429747 CA4P22748 312 aa13.57□□□□□ -0.24
CPNE4-201ENST00000429747 MUM1Q2TAK8 710 aa13.57□□□□□ -0.24
CPNE4-201ENST00000429747 MIGA2Q7L4E1 593 aa13.57□□□□□ -0.24
CPNE4-201ENST00000429747 RGPD8O14715 1765 aaPredicted RBP13.57□□□□□ -0.24
CPNE4-201ENST00000429747 SGK1O00141 431 aa13.57□□□□□ -0.24
CPNE4-201ENST00000429747 ERVK-9P63128 1117 aa13.57□□□□□ -0.24
CPNE4-201ENST00000429747 ITIH3Q06033 890 aa13.57□□□□□ -0.24
CPNE4-201ENST00000429747 DHX34Q14147 1143 aaKnown RBP13.57□□□□□ -0.24
CPNE4-201ENST00000429747 CC2D2BQ6DHV5 1058 aa13.57□□□□□ -0.24
CPNE4-201ENST00000429747 RPAINQ86UA6 219 aa13.57□□□□□ -0.24
CPNE4-201ENST00000429747 HAUS1Q96CS2 278 aa13.57□□□□□ -0.24
CPNE4-201ENST00000429747 CEP170P1Q96L14 293 aa13.57□□□□□ -0.24
CPNE4-201ENST00000429747 ERP44Q9BS26 406 aa13.57□□□□□ -0.24
CPNE4-201ENST00000429747 PITPNM3Q9BZ71 974 aa13.57□□□□□ -0.24
CPNE4-201ENST00000429747 SLC40A1Q9NP59 571 aa13.57□□□□□ -0.24
CPNE4-201ENST00000429747 OSGEPQ9NPF4 335 aa13.57□□□□□ -0.24
CPNE4-201ENST00000429747 ALG6Q9Y672 507 aa13.57□□□□□ -0.24
CPNE4-201ENST00000429747 COL5A2P05997 1499 aaPredicted RBP13.57□□□□□ -0.24
CPNE4-201ENST00000429747 SMARCA1P28370 1054 aa13.57□□□□□ -0.24
CPNE4-201ENST00000429747 PDE6BP35913 854 aa13.57□□□□□ -0.24
CPNE4-201ENST00000429747 DYNLT1P63172 113 aa13.57□□□□□ -0.24
CPNE4-201ENST00000429747 SLC29A2Q14542 456 aa13.57□□□□□ -0.24
CPNE4-201ENST00000429747 MSL3Q8N5Y2 521 aaKnown RBP13.57□□□□□ -0.24
CPNE4-201ENST00000429747 C4orf32Q8N8J7 132 aa13.57□□□□□ -0.24
CPNE4-201ENST00000429747 SAAL1Q96ER3 474 aa13.57□□□□□ -0.24
CPNE4-201ENST00000429747 LXNQ9BS40 222 aa13.57□□□□□ -0.24
CPNE4-201ENST00000429747 SUCLA2Q9P2R7 463 aaPredicted RBP13.57□□□□□ -0.24
CPNE4-201ENST00000429747 APEX2Q9UBZ4 518 aa13.57□□□□□ -0.24
CPNE4-201ENST00000429747 TULP2O00295 520 aa13.57□□□□□ -0.24
CPNE4-201ENST00000429747 ZNF263O14978 683 aa13.57□□□□□ -0.24
CPNE4-201ENST00000429747 CYP26A1O43174 497 aa13.57□□□□□ -0.24
CPNE4-201ENST00000429747 ATMINO43313 823 aaPredicted RBP13.57□□□□□ -0.24
CPNE4-201ENST00000429747 AKAP3O75969 853 aa13.57□□□□□ -0.24
CPNE4-201ENST00000429747 RPA1P27694 616 aa13.57□□□□□ -0.24
CPNE4-201ENST00000429747 NBPF9Q3BBW0 867 aa13.57□□□□□ -0.24
CPNE4-201ENST00000429747 AGBL2Q5U5Z8 902 aa13.57□□□□□ -0.24
CPNE4-201ENST00000429747 TMBIM4Q9HC24 238 aa13.57□□□□□ -0.24
CPNE4-201ENST00000429747 BCL9O00512 1426 aa13.56□□□□□ -0.24
CPNE4-201ENST00000429747 RASA4BC9J798 803 aa13.56□□□□□ -0.24
CPNE4-201ENST00000429747 RASA4O43374 803 aa13.56□□□□□ -0.24
CPNE4-201ENST00000429747 PASD1Q8IV76 773 aa13.56□□□□□ -0.24
CPNE4-201ENST00000429747 TTC7AQ9ULT0 858 aaPredicted RBP13.56□□□□□ -0.24
CPNE4-201ENST00000429747 TCP11X1B4DZS4 312 aa13.56□□□□□ -0.24
CPNE4-201ENST00000429747 BPIFB4P59827 614 aa13.56□□□□□ -0.24
CPNE4-201ENST00000429747 RAPGEF5Q92565 580 aa13.56□□□□□ -0.24
CPNE4-201ENST00000429747 FAM53CQ9NYF3 392 aa13.56□□□□□ -0.24
CPNE4-201ENST00000429747 TXNDC16Q9P2K2 825 aa13.56□□□□□ -0.24
CPNE4-201ENST00000429747 PITPNM2Q9BZ72 1349 aa13.56□□□□□ -0.24
CPNE4-201ENST00000429747 EIF4E1BA6NMX2 242 aaKnown RBP13.56□□□□□ -0.24
CPNE4-201ENST00000429747 IPO5O00410 1097 aaKnown RBP13.56□□□□□ -0.24
CPNE4-201ENST00000429747 ADAMTS3O15072 1205 aa13.56□□□□□ -0.24
CPNE4-201ENST00000429747 CIB2O75838 187 aa13.56□□□□□ -0.24
CPNE4-201ENST00000429747 ECM2O94769 699 aaPredicted RBP13.56□□□□□ -0.24
CPNE4-201ENST00000429747 LONRF1Q17RB8 773 aa13.56□□□□□ -0.24
CPNE4-201ENST00000429747 BRDTQ58F21 947 aaPredicted RBP13.56□□□□□ -0.24
CPNE4-201ENST00000429747 SLC30A5Q8TAD4 765 aa13.56□□□□□ -0.24
CPNE4-201ENST00000429747 RTFDC1Q9BY42 306 aaPredicted RBP13.56□□□□□ -0.24
CPNE4-201ENST00000429747 THAP2Q9H0W7 228 aa13.56□□□□□ -0.24
CPNE4-201ENST00000429747 SLC16A3O15427 465 aaKnown RBP13.55□□□□□ -0.24
CPNE4-201ENST00000429747 NDUFB10O96000 172 aa13.55□□□□□ -0.24
CPNE4-201ENST00000429747 PSMC6P62333 389 aa13.55□□□□□ -0.24
CPNE4-201ENST00000429747 GRIK5Q16478 980 aa13.55□□□□□ -0.24
CPNE4-201ENST00000429747 PRR5LQ6MZQ0 368 aa13.55□□□□□ -0.24
CPNE4-201ENST00000429747 SAYSD1Q9NPB0 183 aa13.55□□□□□ -0.24
CPNE4-201ENST00000429747 SEL1LQ9UBV2 794 aa13.55□□□□□ -0.24
CPNE4-201ENST00000429747 GOLGA8SH3BPF8 625 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 256.9 ms