RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 KIFAP3Q92845 792 aa24.74■■□□□ 1.55
PTPN18-205ENST00000428843 DHX58Q96C10 678 aa24.74■■□□□ 1.55
PTPN18-205ENST00000428843 TIPINQ9BVW5 301 aa24.74■■□□□ 1.55
PTPN18-205ENST00000428843 IFT122Q9HBG6 1241 aa24.74■■□□□ 1.55
PTPN18-205ENST00000428843 MYH11P35749 1972 aa24.74■■□□□ 1.55
PTPN18-205ENST00000428843 A0A1B0GVL5 298 aa24.73■■□□□ 1.55
PTPN18-205ENST00000428843 A0A1W2PQ27 194 aa24.73■■□□□ 1.55
PTPN18-205ENST00000428843 A0A1W2PQ64 194 aa24.73■■□□□ 1.55
PTPN18-205ENST00000428843 A0A1W2PQD8 194 aa24.73■■□□□ 1.55
PTPN18-205ENST00000428843 POLR2DO15514 142 aaKnown RBP24.73■■□□□ 1.55
PTPN18-205ENST00000428843 ACTN1P12814 892 aa24.73■■□□□ 1.55
PTPN18-205ENST00000428843 PFKFB1P16118 471 aa24.73■■□□□ 1.55
PTPN18-205ENST00000428843 MAPK7Q13164 816 aa24.73■■□□□ 1.55
PTPN18-205ENST00000428843 PAK2Q13177 524 aa24.73■■□□□ 1.55
PTPN18-205ENST00000428843 TFDP1Q14186 410 aa24.73■■□□□ 1.55
PTPN18-205ENST00000428843 FAM228AQ86W67 206 aa24.73■■□□□ 1.55
PTPN18-205ENST00000428843 BSNDQ8WZ55 320 aa24.73■■□□□ 1.55
PTPN18-205ENST00000428843 HERVK_113Q902F9 699 aa24.73■■□□□ 1.55
PTPN18-205ENST00000428843 ERVK-5Q9HDB9 667 aa24.73■■□□□ 1.55
PTPN18-205ENST00000428843 KCNH3Q9ULD8 1083 aa24.73■■□□□ 1.55
PTPN18-205ENST00000428843 PADI3Q9ULW8 664 aa24.73■■□□□ 1.55
PTPN18-205ENST00000428843 MICAL3Q7RTP6 2002 aa24.73■■□□□ 1.55
PTPN18-205ENST00000428843 CSDE1O75534 798 aaKnown RBP24.72■■□□□ 1.55
PTPN18-205ENST00000428843 NFX1Q12986 1120 aaKnown RBP24.72■■□□□ 1.55
PTPN18-205ENST00000428843 SV2BQ7L1I2 683 aa24.72■■□□□ 1.55
PTPN18-205ENST00000428843 TDHQ8IZJ6 230 aa24.72■■□□□ 1.55
PTPN18-205ENST00000428843 IQUBQ8NA54 791 aa24.72■■□□□ 1.55
PTPN18-205ENST00000428843 APBB2Q92870 758 aa24.72■■□□□ 1.55
PTPN18-205ENST00000428843 DRC1Q96MC2 740 aa24.72■■□□□ 1.55
PTPN18-205ENST00000428843 ST3GAL5Q9UNP4 418 aa24.72■■□□□ 1.55
PTPN18-205ENST00000428843 GPR182O15218 404 aa24.71■■□□□ 1.55
PTPN18-205ENST00000428843 FGFR4P22455 802 aa24.71■■□□□ 1.55
PTPN18-205ENST00000428843 PHKA2P46019 1235 aa24.71■■□□□ 1.55
PTPN18-205ENST00000428843 CACNB1Q02641 598 aaPredicted RBP24.71■■□□□ 1.55
PTPN18-205ENST00000428843 POU5F1BQ06416 359 aa24.71■■□□□ 1.55
PTPN18-205ENST00000428843 IKBKEQ14164 716 aa24.71■■□□□ 1.55
PTPN18-205ENST00000428843 ODR4Q5SWX8 454 aa24.71■■□□□ 1.55
PTPN18-205ENST00000428843 SRGAP1Q7Z6B7 1085 aa24.71■■□□□ 1.55
PTPN18-205ENST00000428843 FSIP1Q8NA03 581 aa24.71■■□□□ 1.55
PTPN18-205ENST00000428843 RNPC3Q96LT9 517 aaKnown RBP24.71■■□□□ 1.55
PTPN18-205ENST00000428843 INO80BQ9C086 356 aaPredicted RBP24.71■■□□□ 1.55
PTPN18-205ENST00000428843 CUEDC2Q9H467 287 aa24.71■■□□□ 1.55
PTPN18-205ENST00000428843 HPSEQ9Y251 543 aa24.71■■□□□ 1.55
PTPN18-205ENST00000428843 FAM237AA0A1B0GTK4 181 aa24.7■■□□□ 1.54
PTPN18-205ENST00000428843 LRRIQ4A6NIV6 560 aa24.7■■□□□ 1.54
PTPN18-205ENST00000428843 ZBBXA8MT70 800 aa24.7■■□□□ 1.54
PTPN18-205ENST00000428843 BAIAP3O94812 1187 aa24.7■■□□□ 1.54
PTPN18-205ENST00000428843 PTENP60484 403 aa24.7■■□□□ 1.54
PTPN18-205ENST00000428843 CSPP1Q1MSJ5 1256 aa24.7■■□□□ 1.54
PTPN18-205ENST00000428843 RASIP1Q5U651 963 aa24.7■■□□□ 1.54
PTPN18-205ENST00000428843 MRPS27Q92552 414 aaKnown RBP24.7■■□□□ 1.54
PTPN18-205ENST00000428843 IFT74Q96LB3 600 aa24.7■■□□□ 1.54
PTPN18-205ENST00000428843 REEP2Q9BRK0 252 aa24.7■■□□□ 1.54
PTPN18-205ENST00000428843 PYM1Q9BRP8 204 aaKnown RBP24.7■■□□□ 1.54
PTPN18-205ENST00000428843 GOLPH3LQ9H4A5 285 aa24.7■■□□□ 1.54
PTPN18-205ENST00000428843 MINDY3Q9H8M7 445 aa24.7■■□□□ 1.54
PTPN18-205ENST00000428843 CXXC1Q9P0U4 656 aaPredicted RBP24.7■■□□□ 1.54
PTPN18-205ENST00000428843 ABHD14A-ACY1A0A1B0GW23 586 aa24.69■■□□□ 1.54
PTPN18-205ENST00000428843 GOLGA6L4A6NEF3 574 aa24.69■■□□□ 1.54
PTPN18-205ENST00000428843 MYMKA6NI61 221 aa24.69■■□□□ 1.54
PTPN18-205ENST00000428843 SFI1A8K8P3 1242 aa24.69■■□□□ 1.54
PTPN18-205ENST00000428843 KRT18P05783 430 aaKnown RBP24.69■■□□□ 1.54
PTPN18-205ENST00000428843 NAMPTP43490 491 aa24.69■■□□□ 1.54
PTPN18-205ENST00000428843 NDUFA8P51970 172 aa24.69■■□□□ 1.54
PTPN18-205ENST00000428843 GIT2Q14161 759 aa24.69■■□□□ 1.54
PTPN18-205ENST00000428843 PPP2R5AQ15172 486 aa24.69■■□□□ 1.54
PTPN18-205ENST00000428843 IFNLR1Q8IU57 520 aaPredicted RBP24.69■■□□□ 1.54
PTPN18-205ENST00000428843 MTIF3Q9H2K0 278 aaKnown RBP24.69■■□□□ 1.54
PTPN18-205ENST00000428843 TMX1Q9H3N1 280 aa24.69■■□□□ 1.54
PTPN18-205ENST00000428843 ODF2LQ9ULJ1 636 aa24.69■■□□□ 1.54
PTPN18-205ENST00000428843 SFPQP23246 707 aaKnown RBP eCLIP24.68■■□□□ 1.54
PTPN18-205ENST00000428843 PEX3P56589 373 aa24.68■■□□□ 1.54
PTPN18-205ENST00000428843 DYMQ7RTS9 669 aa24.68■■□□□ 1.54
PTPN18-205ENST00000428843 DDX12PQ92771 950 aa24.68■■□□□ 1.54
PTPN18-205ENST00000428843 STAMQ92783 540 aa24.68■■□□□ 1.54
PTPN18-205ENST00000428843 NFKBIZQ9BYH8 718 aa24.68■■□□□ 1.54
PTPN18-205ENST00000428843 TNMDQ9H2S6 317 aa24.68■■□□□ 1.54
PTPN18-205ENST00000428843 C17orf75Q9HAS0 396 aa24.68■■□□□ 1.54
PTPN18-205ENST00000428843 KBTBD4Q9NVX7 518 aa24.68■■□□□ 1.54
PTPN18-205ENST00000428843 SERTAD1Q9UHV2 236 aa24.68■■□□□ 1.54
PTPN18-205ENST00000428843 EFCAB14O75071 495 aa24.67■■□□□ 1.54
PTPN18-205ENST00000428843 SYKP43405 635 aa24.67■■□□□ 1.54
PTPN18-205ENST00000428843 WDR5P61964 334 aaKnown RBP24.67■■□□□ 1.54
PTPN18-205ENST00000428843 CDCA2Q69YH5 1023 aaPredicted RBP24.67■■□□□ 1.54
PTPN18-205ENST00000428843 DEPTORQ8TB45 409 aa24.67■■□□□ 1.54
PTPN18-205ENST00000428843 KIFC3Q9BVG8 833 aa24.67■■□□□ 1.54
PTPN18-205ENST00000428843 FTHL17Q9BXU8 183 aa24.67■■□□□ 1.54
PTPN18-205ENST00000428843 MAGEF1Q9HAY2 307 aa24.67■■□□□ 1.54
PTPN18-205ENST00000428843 PTPRSQ13332 1948 aa24.67■■□□□ 1.54
PTPN18-205ENST00000428843 ADGRA3Q8IWK6 1321 aa24.66■■□□□ 1.54
PTPN18-205ENST00000428843 A0A1W2PPC1 479 aa24.66■■□□□ 1.54
PTPN18-205ENST00000428843 INO80B-WBP1J3KQ70 363 aa24.66■■□□□ 1.54
PTPN18-205ENST00000428843 ACTN4O43707 911 aaKnown RBP24.66■■□□□ 1.54
PTPN18-205ENST00000428843 MGEA5O60502 916 aa24.66■■□□□ 1.54
PTPN18-205ENST00000428843 PLS3P13797 630 aa24.66■■□□□ 1.54
PTPN18-205ENST00000428843 NPTX2P47972 431 aa24.66■■□□□ 1.54
PTPN18-205ENST00000428843 MBTD1Q05BQ5 628 aa24.66■■□□□ 1.54
PTPN18-205ENST00000428843 DMP1Q13316 513 aaPredicted RBP24.66■■□□□ 1.54
PTPN18-205ENST00000428843 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.66■■□□□ 1.54
PTPN18-205ENST00000428843 CATSPER4Q7RTX7 472 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms