RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 POTEDQ86YR6 584 aa19.16■□□□□ 0.66
TRIM39-209ENST00000428728 KSR1Q8IVT5 923 aa19.16■□□□□ 0.66
TRIM39-209ENST00000428728 NECAB1Q8N987 351 aa19.16■□□□□ 0.66
TRIM39-209ENST00000428728 HELQQ8TDG4 1101 aa19.16■□□□□ 0.66
TRIM39-209ENST00000428728 ZNF558Q96NG5 402 aa19.16■□□□□ 0.66
TRIM39-209ENST00000428728 POP1Q99575 1024 aaKnown RBP19.16■□□□□ 0.66
TRIM39-209ENST00000428728 ENTPD7Q9NQZ7 604 aa19.16■□□□□ 0.66
TRIM39-209ENST00000428728 PPP4R2Q9NY27 417 aa19.16■□□□□ 0.66
TRIM39-209ENST00000428728 DACT1Q9NYF0 836 aa19.16■□□□□ 0.66
TRIM39-209ENST00000428728 SUCLA2Q9P2R7 463 aaPredicted RBP19.16■□□□□ 0.66
TRIM39-209ENST00000428728 DCXO43602 365 aa19.15■□□□□ 0.66
TRIM39-209ENST00000428728 MARCH6O60337 910 aa19.15■□□□□ 0.66
TRIM39-209ENST00000428728 ALADP13716 330 aa19.15■□□□□ 0.66
TRIM39-209ENST00000428728 SFPQP23246 707 aaKnown RBP eCLIP19.15■□□□□ 0.66
TRIM39-209ENST00000428728 QARSP47897 775 aaKnown RBP19.15■□□□□ 0.66
TRIM39-209ENST00000428728 FOSBP53539 338 aa19.15■□□□□ 0.66
TRIM39-209ENST00000428728 NPEPPSP55786 919 aa19.15■□□□□ 0.66
TRIM39-209ENST00000428728 ANKRD1Q15327 319 aa19.15■□□□□ 0.66
TRIM39-209ENST00000428728 EARS2Q5JPH6 523 aaKnown RBP19.15■□□□□ 0.66
TRIM39-209ENST00000428728 TWF2Q6IBS0 349 aaKnown RBP19.15■□□□□ 0.66
TRIM39-209ENST00000428728 PPP4R3AQ6IN85 833 aa19.15■□□□□ 0.66
TRIM39-209ENST00000428728 SMRP1Q8NCR6 262 aa19.15■□□□□ 0.66
TRIM39-209ENST00000428728 MRPS27Q92552 414 aaKnown RBP19.15■□□□□ 0.66
TRIM39-209ENST00000428728 FAM20AQ96MK3 541 aa19.15■□□□□ 0.66
TRIM39-209ENST00000428728 CYP26B1Q9NR63 512 aa19.15■□□□□ 0.66
TRIM39-209ENST00000428728 BMP2KQ9NSY1 1161 aaPredicted RBP19.15■□□□□ 0.66
TRIM39-209ENST00000428728 WRAP73Q9P2S5 460 aaPredicted RBP19.15■□□□□ 0.66
TRIM39-209ENST00000428728 PIN4Q9Y237 131 aaKnown RBP19.15■□□□□ 0.66
TRIM39-209ENST00000428728 TDRD15B5MCY1 1934 aaKnown RBP19.14■□□□□ 0.65
TRIM39-209ENST00000428728 A0A0U1RQF3 1178 aa19.14■□□□□ 0.65
TRIM39-209ENST00000428728 FSCN2O14926 492 aa19.14■□□□□ 0.65
TRIM39-209ENST00000428728 MAFO75444 373 aaPredicted RBP19.14■□□□□ 0.65
TRIM39-209ENST00000428728 NR5A1Q13285 461 aa19.14■□□□□ 0.65
TRIM39-209ENST00000428728 LONRF3Q496Y0 759 aa19.14■□□□□ 0.65
TRIM39-209ENST00000428728 NCAPH2Q6IBW4 605 aa19.14■□□□□ 0.65
TRIM39-209ENST00000428728 ZNF598Q86UK7 904 aaKnown RBP19.14■□□□□ 0.65
TRIM39-209ENST00000428728 ZNF410Q86VK4 478 aa19.14■□□□□ 0.65
TRIM39-209ENST00000428728 VN1R2Q8NFZ6 395 aa19.14■□□□□ 0.65
TRIM39-209ENST00000428728 WASF1Q92558 559 aa19.14■□□□□ 0.65
TRIM39-209ENST00000428728 TCF25Q9BQ70 676 aa19.14■□□□□ 0.65
TRIM39-209ENST00000428728 LXNQ9BS40 222 aa19.14■□□□□ 0.65
TRIM39-209ENST00000428728 LZTS1Q9Y250 596 aa19.14■□□□□ 0.65
TRIM39-209ENST00000428728 EYA4O95677 639 aa19.13■□□□□ 0.65
TRIM39-209ENST00000428728 PPM1AP35813 382 aa19.13■□□□□ 0.65
TRIM39-209ENST00000428728 KRT2P35908 639 aa19.13■□□□□ 0.65
TRIM39-209ENST00000428728 PLA2G5P39877 138 aa19.13■□□□□ 0.65
TRIM39-209ENST00000428728 POLGP54098 1239 aaPredicted RBP19.13■□□□□ 0.65
TRIM39-209ENST00000428728 CDC42EP1Q00587 391 aa19.13■□□□□ 0.65
TRIM39-209ENST00000428728 PLCB3Q01970 1234 aa19.13■□□□□ 0.65
TRIM39-209ENST00000428728 COASYQ13057 564 aa19.13■□□□□ 0.65
TRIM39-209ENST00000428728 ME3Q16798 604 aa19.13■□□□□ 0.65
TRIM39-209ENST00000428728 DUSP6Q16828 381 aa19.13■□□□□ 0.65
TRIM39-209ENST00000428728 PDE12Q6L8Q7 609 aaKnown RBP19.13■□□□□ 0.65
TRIM39-209ENST00000428728 CATSPER4Q7RTX7 472 aa19.13■□□□□ 0.65
TRIM39-209ENST00000428728 ZNF579Q8NAF0 562 aaKnown RBP19.13■□□□□ 0.65
TRIM39-209ENST00000428728 SLC7A3Q8WY07 619 aa19.13■□□□□ 0.65
TRIM39-209ENST00000428728 HAS1Q92839 578 aa19.13■□□□□ 0.65
TRIM39-209ENST00000428728 LPPQ93052 612 aa19.13■□□□□ 0.65
TRIM39-209ENST00000428728 FAM122AQ96E09 287 aa19.13■□□□□ 0.65
TRIM39-209ENST00000428728 CEP170P1Q96L14 293 aa19.13■□□□□ 0.65
TRIM39-209ENST00000428728 NAP1L4Q99733 375 aaKnown RBP19.13■□□□□ 0.65
TRIM39-209ENST00000428728 JPH2Q9BR39 696 aaPredicted RBP19.13■□□□□ 0.65
TRIM39-209ENST00000428728 SPG21Q9NZD8 308 aa19.13■□□□□ 0.65
TRIM39-209ENST00000428728 PUF60Q9UHX1 559 aaKnown RBP19.13■□□□□ 0.65
TRIM39-209ENST00000428728 USP15Q9Y4E8 981 aaPredicted RBP19.13■□□□□ 0.65
TRIM39-209ENST00000428728 PRR33A8MZF0 331 aa19.12■□□□□ 0.65
TRIM39-209ENST00000428728 DKC1O60832 514 aaKnown RBP eCLIP19.12■□□□□ 0.65
TRIM39-209ENST00000428728 EOMESO95936 686 aa19.12■□□□□ 0.65
TRIM39-209ENST00000428728 P4HBP07237 508 aaKnown RBP19.12■□□□□ 0.65
TRIM39-209ENST00000428728 PHKA2P46019 1235 aa19.12■□□□□ 0.65
TRIM39-209ENST00000428728 CYP4A11Q02928 519 aa19.12■□□□□ 0.65
TRIM39-209ENST00000428728 LLGL2Q6P1M3 1020 aa19.12■□□□□ 0.65
TRIM39-209ENST00000428728 GTF3C6Q969F1 213 aa19.12■□□□□ 0.65
TRIM39-209ENST00000428728 CDCA3Q99618 268 aaPredicted RBP19.12■□□□□ 0.65
TRIM39-209ENST00000428728 MRPL9Q9BYD2 267 aaKnown RBP19.12■□□□□ 0.65
TRIM39-209ENST00000428728 INO80BQ9C086 356 aaPredicted RBP19.12■□□□□ 0.65
TRIM39-209ENST00000428728 BRMS1Q9HCU9 246 aa19.12■□□□□ 0.65
TRIM39-209ENST00000428728 RGL1Q9NZL6 768 aa19.12■□□□□ 0.65
TRIM39-209ENST00000428728 MUTYHQ9UIF7 546 aa19.12■□□□□ 0.65
TRIM39-209ENST00000428728 COL4A3BPQ9Y5P4 624 aa19.12■□□□□ 0.65
TRIM39-209ENST00000428728 FSD2A1L4K1 749 aa19.11■□□□□ 0.65
TRIM39-209ENST00000428728 HIDE1A8MVS5 230 aa19.11■□□□□ 0.65
TRIM39-209ENST00000428728 NT5C1B-RDH14C9J2C7 533 aa19.11■□□□□ 0.65
TRIM39-209ENST00000428728 TBX3O15119 743 aa19.11■□□□□ 0.65
TRIM39-209ENST00000428728 ZC3H11AO75152 810 aaKnown RBP eCLIP19.11■□□□□ 0.65
TRIM39-209ENST00000428728 FDPSP14324 419 aaKnown RBP19.11■□□□□ 0.65
TRIM39-209ENST00000428728 CA8P35219 290 aa19.11■□□□□ 0.65
TRIM39-209ENST00000428728 KRT17Q04695 432 aa19.11■□□□□ 0.65
TRIM39-209ENST00000428728 EPHA7Q15375 998 aa19.11■□□□□ 0.65
TRIM39-209ENST00000428728 SLC39A11Q8N1S5 342 aa19.11■□□□□ 0.65
TRIM39-209ENST00000428728 TMEM143Q96AN5 459 aa19.11■□□□□ 0.65
TRIM39-209ENST00000428728 DYDC2Q96IM9 177 aa19.11■□□□□ 0.65
TRIM39-209ENST00000428728 CHST12Q9NRB3 414 aa19.11■□□□□ 0.65
TRIM39-209ENST00000428728 FAM105AQ9NUU6 356 aa19.11■□□□□ 0.65
TRIM39-209ENST00000428728 INPP5FQ9Y2H2 1132 aa19.11■□□□□ 0.65
TRIM39-209ENST00000428728 MEIS3P2A8K0S8 358 aa19.1■□□□□ 0.65
TRIM39-209ENST00000428728 BAG4O95429 457 aaKnown RBP19.1■□□□□ 0.65
TRIM39-209ENST00000428728 SRGAP2BP0DMP2 458 aa19.1■□□□□ 0.65
TRIM39-209ENST00000428728 YWHABP31946 246 aaKnown RBP19.1■□□□□ 0.65
TRIM39-209ENST00000428728 BCAR1P56945 870 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms