RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 GLRA2P23416 452 aa16.13■□□□□ 0.17
SGCE-204ENST00000428696 EIF4BP23588 611 aaKnown RBP16.13■□□□□ 0.17
SGCE-204ENST00000428696 ARL2P36404 184 aa16.13■□□□□ 0.17
SGCE-204ENST00000428696 PHKA2P46019 1235 aa16.13■□□□□ 0.17
SGCE-204ENST00000428696 KCNJ6P48051 423 aa16.13■□□□□ 0.17
SGCE-204ENST00000428696 TCTN1Q2MV58 587 aa16.13■□□□□ 0.17
SGCE-204ENST00000428696 PLEKHG4Q58EX7 1191 aa16.13■□□□□ 0.17
SGCE-204ENST00000428696 RESP18Q5W5W9 173 aa16.13■□□□□ 0.17
SGCE-204ENST00000428696 FAM117BQ6P1L5 589 aa16.13■□□□□ 0.17
SGCE-204ENST00000428696 TDHQ8IZJ6 230 aa16.13■□□□□ 0.17
SGCE-204ENST00000428696 ZNF710Q8N1W2 664 aa16.13■□□□□ 0.17
SGCE-204ENST00000428696 LARP4BQ92615 738 aaKnown RBP16.13■□□□□ 0.17
SGCE-204ENST00000428696 STAMQ92783 540 aa16.13■□□□□ 0.17
SGCE-204ENST00000428696 BLOC1S4Q9NUP1 217 aa16.13■□□□□ 0.17
SGCE-204ENST00000428696 SLC4A7Q9Y6M7 1214 aa16.13■□□□□ 0.17
SGCE-204ENST00000428696 EVPLQ92817 2033 aa16.13■□□□□ 0.17
SGCE-204ENST00000428696 WDR81Q562E7 1941 aa16.13■□□□□ 0.17
SGCE-204ENST00000428696 INO80B-WBP1J3KQ70 363 aa16.12■□□□□ 0.17
SGCE-204ENST00000428696 DARSP14868 501 aaKnown RBP16.12■□□□□ 0.17
SGCE-204ENST00000428696 PEX3P56589 373 aa16.12■□□□□ 0.17
SGCE-204ENST00000428696 TMEM132AQ24JP5 1023 aa16.12■□□□□ 0.17
SGCE-204ENST00000428696 ODR4Q5SWX8 454 aa16.12■□□□□ 0.17
SGCE-204ENST00000428696 ADALQ6DHV7 355 aa16.12■□□□□ 0.17
SGCE-204ENST00000428696 C1orf186Q6ZWK4 172 aa16.12■□□□□ 0.17
SGCE-204ENST00000428696 DYMQ7RTS9 669 aa16.12■□□□□ 0.17
SGCE-204ENST00000428696 CATSPER4Q7RTX7 472 aa16.12■□□□□ 0.17
SGCE-204ENST00000428696 ZNF410Q86VK4 478 aa16.12■□□□□ 0.17
SGCE-204ENST00000428696 IQUBQ8NA54 791 aa16.12■□□□□ 0.17
SGCE-204ENST00000428696 DEPTORQ8TB45 409 aa16.12■□□□□ 0.17
SGCE-204ENST00000428696 LRRC15Q8TF66 581 aa16.12■□□□□ 0.17
SGCE-204ENST00000428696 KIFAP3Q92845 792 aa16.12■□□□□ 0.17
SGCE-204ENST00000428696 VWCEQ96DN2 955 aa16.12■□□□□ 0.17
SGCE-204ENST00000428696 DRC1Q96MC2 740 aa16.12■□□□□ 0.17
SGCE-204ENST00000428696 INO80BQ9C086 356 aaPredicted RBP16.12■□□□□ 0.17
SGCE-204ENST00000428696 CXXC1Q9P0U4 656 aaPredicted RBP16.12■□□□□ 0.17
SGCE-204ENST00000428696 STK17AQ9UEE5 414 aa16.12■□□□□ 0.17
SGCE-204ENST00000428696 KCNH3Q9ULD8 1083 aa16.12■□□□□ 0.17
SGCE-204ENST00000428696 ABHD14A-ACY1A0A1B0GW23 586 aa16.11■□□□□ 0.17
SGCE-204ENST00000428696 DENND3A2RUS2 1198 aa16.11■□□□□ 0.17
SGCE-204ENST00000428696 UPP2O95045 317 aa16.11■□□□□ 0.17
SGCE-204ENST00000428696 CMA1P23946 247 aa16.11■□□□□ 0.17
SGCE-204ENST00000428696 CAPSQ13938 189 aa16.11■□□□□ 0.17
SGCE-204ENST00000428696 CSPP1Q1MSJ5 1256 aa16.11■□□□□ 0.17
SGCE-204ENST00000428696 ARSHQ5FYA8 562 aa16.11■□□□□ 0.17
SGCE-204ENST00000428696 FAM228AQ86W67 206 aa16.11■□□□□ 0.17
SGCE-204ENST00000428696 FSIP1Q8NA03 581 aa16.11■□□□□ 0.17
SGCE-204ENST00000428696 HERVK_113Q902F9 699 aa16.11■□□□□ 0.17
SGCE-204ENST00000428696 ZBED2Q9BTP6 218 aa16.11■□□□□ 0.17
SGCE-204ENST00000428696 TBCAO75347 108 aaKnown RBP16.11■□□□□ 0.17
SGCE-204ENST00000428696 FAM13AO94988 1023 aa16.11■□□□□ 0.17
SGCE-204ENST00000428696 PFKFB1P16118 471 aa16.11■□□□□ 0.17
SGCE-204ENST00000428696 ZSCAN20P17040 1043 aaPredicted RBP16.11■□□□□ 0.17
SGCE-204ENST00000428696 SFPQP23246 707 aaKnown RBP eCLIP16.11■□□□□ 0.17
SGCE-204ENST00000428696 NCBP1Q09161 790 aaKnown RBP16.11■□□□□ 0.17
SGCE-204ENST00000428696 PPP2R5AQ15172 486 aa16.11■□□□□ 0.17
SGCE-204ENST00000428696 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.11■□□□□ 0.17
SGCE-204ENST00000428696 TMCO2Q7Z6W1 182 aaPredicted RBP16.11■□□□□ 0.17
SGCE-204ENST00000428696 ZBTB8OSQ8IWT0 167 aa16.11■□□□□ 0.17
SGCE-204ENST00000428696 CEP57L1Q8IYX8 460 aa16.11■□□□□ 0.17
SGCE-204ENST00000428696 MYOCDQ8IZQ8 938 aa16.11■□□□□ 0.17
SGCE-204ENST00000428696 MYCT1Q8N699 235 aa16.11■□□□□ 0.17
SGCE-204ENST00000428696 APBB2Q92870 758 aa16.11■□□□□ 0.17
SGCE-204ENST00000428696 KIFC3Q9BVG8 833 aa16.11■□□□□ 0.17
SGCE-204ENST00000428696 SQORQ9Y6N5 450 aa16.11■□□□□ 0.17
SGCE-204ENST00000428696 SCN5AQ14524 2016 aa16.1■□□□□ 0.17
SGCE-204ENST00000428696 ENPP3O14638 875 aa16.1■□□□□ 0.17
SGCE-204ENST00000428696 ERLIN2O94905 339 aa16.1■□□□□ 0.17
SGCE-204ENST00000428696 AMHP03971 560 aa16.1■□□□□ 0.17
SGCE-204ENST00000428696 IDEP14735 1019 aa16.1■□□□□ 0.17
SGCE-204ENST00000428696 ATP2A2P16615 1042 aaKnown RBP16.1■□□□□ 0.17
SGCE-204ENST00000428696 GUCY2CP25092 1073 aa16.1■□□□□ 0.17
SGCE-204ENST00000428696 AFMP43652 599 aa16.1■□□□□ 0.17
SGCE-204ENST00000428696 DMP1Q13316 513 aaPredicted RBP16.1■□□□□ 0.17
SGCE-204ENST00000428696 SRGAP1Q7Z6B7 1085 aa16.1■□□□□ 0.17
SGCE-204ENST00000428696 BSNDQ8WZ55 320 aa16.1■□□□□ 0.17
SGCE-204ENST00000428696 ADAM2Q99965 735 aa16.1■□□□□ 0.17
SGCE-204ENST00000428696 REEP2Q9BRK0 252 aa16.1■□□□□ 0.17
SGCE-204ENST00000428696 IFT122Q9HBG6 1241 aa16.1■□□□□ 0.17
SGCE-204ENST00000428696 ERVK-5Q9HDB9 667 aa16.1■□□□□ 0.17
SGCE-204ENST00000428696 KCND2Q9NZV8 630 aa16.1■□□□□ 0.17
SGCE-204ENST00000428696 SERTAD1Q9UHV2 236 aa16.1■□□□□ 0.17
SGCE-204ENST00000428696 PIN4Q9Y237 131 aaKnown RBP16.1■□□□□ 0.17
SGCE-204ENST00000428696 MYH15Q9Y2K3 1946 aa16.09■□□□□ 0.17
SGCE-204ENST00000428696 RANBP2P49792 3224 aaKnown RBP16.09■□□□□ 0.17
SGCE-204ENST00000428696 MYMKA6NI61 221 aa16.09■□□□□ 0.17
SGCE-204ENST00000428696 GRXCR1A8MXD5 290 aa16.09■□□□□ 0.17
SGCE-204ENST00000428696 BAIAP3O94812 1187 aa16.09■□□□□ 0.17
SGCE-204ENST00000428696 SYKP43405 635 aa16.09■□□□□ 0.17
SGCE-204ENST00000428696 NDUFA8P51970 172 aa16.09■□□□□ 0.17
SGCE-204ENST00000428696 PTENP60484 403 aa16.09■□□□□ 0.17
SGCE-204ENST00000428696 GIT2Q14161 759 aa16.09■□□□□ 0.17
SGCE-204ENST00000428696 NAALADL2Q58DX5 795 aa16.09■□□□□ 0.17
SGCE-204ENST00000428696 RNF169Q8NCN4 708 aa16.09■□□□□ 0.17
SGCE-204ENST00000428696 MRPS27Q92552 414 aaKnown RBP16.09■□□□□ 0.17
SGCE-204ENST00000428696 DDX12PQ92771 950 aa16.09■□□□□ 0.17
SGCE-204ENST00000428696 TIPINQ9BVW5 301 aa16.09■□□□□ 0.17
SGCE-204ENST00000428696 FTHL17Q9BXU8 183 aa16.09■□□□□ 0.17
SGCE-204ENST00000428696 MINDY3Q9H8M7 445 aa16.09■□□□□ 0.17
SGCE-204ENST00000428696 KMT5AQ9NQR1 393 aa16.09■□□□□ 0.17
SGCE-204ENST00000428696 LTBP2Q14767 1821 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms