RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 HELQQ8TDG4 1101 aa17.44■□□□□ 0.38
SEC13-210ENST00000428626 MRPS27Q92552 414 aaKnown RBP17.44■□□□□ 0.38
SEC13-210ENST00000428626 PPP2R3CQ969Q6 453 aa17.44■□□□□ 0.38
SEC13-210ENST00000428626 SCLT1Q96NL6 688 aa17.44■□□□□ 0.38
SEC13-210ENST00000428626 RNF216Q9NWF9 866 aaPredicted RBP17.44■□□□□ 0.38
SEC13-210ENST00000428626 MUTYHQ9UIF7 546 aa17.44■□□□□ 0.38
SEC13-210ENST00000428626 USP15Q9Y4E8 981 aaPredicted RBP17.44■□□□□ 0.38
SEC13-210ENST00000428626 MEIS3P2A8K0S8 358 aa17.43■□□□□ 0.38
SEC13-210ENST00000428626 HIDE1A8MVS5 230 aa17.43■□□□□ 0.38
SEC13-210ENST00000428626 AK2P54819 239 aa17.43■□□□□ 0.38
SEC13-210ENST00000428626 PSMC5P62195 406 aa17.43■□□□□ 0.38
SEC13-210ENST00000428626 PIK3AP1Q6ZUJ8 805 aa17.43■□□□□ 0.38
SEC13-210ENST00000428626 NEK8Q86SG6 692 aa17.43■□□□□ 0.38
SEC13-210ENST00000428626 RNF135Q8IUD6 432 aa17.43■□□□□ 0.38
SEC13-210ENST00000428626 LRRC43Q8N309 656 aa17.43■□□□□ 0.38
SEC13-210ENST00000428626 SUCLA2Q9P2R7 463 aaPredicted RBP17.43■□□□□ 0.38
SEC13-210ENST00000428626 LZTS1Q9Y250 596 aa17.43■□□□□ 0.38
SEC13-210ENST00000428626 ZNF318Q5VUA4 2279 aa17.42■□□□□ 0.38
SEC13-210ENST00000428626 CCDC194A0A1B0GVG4 234 aa17.42■□□□□ 0.38
SEC13-210ENST00000428626 HOXA2O43364 376 aa17.42■□□□□ 0.38
SEC13-210ENST00000428626 SPIRE1Q08AE8 756 aa17.42■□□□□ 0.38
SEC13-210ENST00000428626 NR5A1Q13285 461 aa17.42■□□□□ 0.38
SEC13-210ENST00000428626 CSPP1Q1MSJ5 1256 aa17.42■□□□□ 0.38
SEC13-210ENST00000428626 LONRF3Q496Y0 759 aa17.42■□□□□ 0.38
SEC13-210ENST00000428626 PPP4R3AQ6IN85 833 aa17.42■□□□□ 0.38
SEC13-210ENST00000428626 POTEDQ86YR6 584 aa17.42■□□□□ 0.38
SEC13-210ENST00000428626 RHPN2Q8IUC4 686 aa17.42■□□□□ 0.38
SEC13-210ENST00000428626 SLC39A11Q8N1S5 342 aa17.42■□□□□ 0.38
SEC13-210ENST00000428626 NECAB1Q8N987 351 aa17.42■□□□□ 0.38
SEC13-210ENST00000428626 TNFRSF25Q93038 417 aa17.42■□□□□ 0.38
SEC13-210ENST00000428626 LPPQ93052 612 aa17.42■□□□□ 0.38
SEC13-210ENST00000428626 FAM122AQ96E09 287 aa17.42■□□□□ 0.38
SEC13-210ENST00000428626 ZNF558Q96NG5 402 aa17.42■□□□□ 0.38
SEC13-210ENST00000428626 TCF25Q9BQ70 676 aa17.42■□□□□ 0.38
SEC13-210ENST00000428626 GCOM2Q9BZD3 368 aaPredicted RBP17.42■□□□□ 0.38
SEC13-210ENST00000428626 CYP26B1Q9NR63 512 aa17.42■□□□□ 0.38
SEC13-210ENST00000428626 NT5C1B-RDH14C9J2C7 533 aa17.41■□□□□ 0.38
SEC13-210ENST00000428626 WNT7AO00755 349 aa17.41■□□□□ 0.38
SEC13-210ENST00000428626 ZBTB39O15060 712 aa17.41■□□□□ 0.38
SEC13-210ENST00000428626 CDKL5O76039 1030 aa17.41■□□□□ 0.38
SEC13-210ENST00000428626 EOMESO95936 686 aa17.41■□□□□ 0.38
SEC13-210ENST00000428626 PHKA2P46019 1235 aa17.41■□□□□ 0.38
SEC13-210ENST00000428626 QARSP47897 775 aaKnown RBP17.41■□□□□ 0.38
SEC13-210ENST00000428626 ME3Q16798 604 aa17.41■□□□□ 0.38
SEC13-210ENST00000428626 TMEM173Q86WV6 379 aaPredicted RBP17.41■□□□□ 0.38
SEC13-210ENST00000428626 ABI1Q8IZP0 508 aa17.41■□□□□ 0.38
SEC13-210ENST00000428626 SUSD6Q92537 303 aa17.41■□□□□ 0.38
SEC13-210ENST00000428626 FAM20AQ96MK3 541 aa17.41■□□□□ 0.38
SEC13-210ENST00000428626 NLRP4Q96MN2 994 aa17.41■□□□□ 0.38
SEC13-210ENST00000428626 IFT122Q9HBG6 1241 aa17.41■□□□□ 0.38
SEC13-210ENST00000428626 RGL1Q9NZL6 768 aa17.41■□□□□ 0.38
SEC13-210ENST00000428626 ORC3Q9UBD5 711 aaPredicted RBP17.41■□□□□ 0.38
SEC13-210ENST00000428626 HCN4Q9Y3Q4 1203 aa17.41■□□□□ 0.38
SEC13-210ENST00000428626 LOC730098B7Z3J9 87 aa17.4■□□□□ 0.38
SEC13-210ENST00000428626 B4GALT3O60512 393 aa17.4■□□□□ 0.38
SEC13-210ENST00000428626 CCNT1O60563 726 aaKnown RBP17.4■□□□□ 0.38
SEC13-210ENST00000428626 HERC4Q5GLZ8 1057 aaPredicted RBP17.4■□□□□ 0.38
SEC13-210ENST00000428626 SYCE2Q6PIF2 218 aa17.4■□□□□ 0.38
SEC13-210ENST00000428626 ZNF410Q86VK4 478 aa17.4■□□□□ 0.38
SEC13-210ENST00000428626 POP1Q99575 1024 aaKnown RBP17.4■□□□□ 0.38
SEC13-210ENST00000428626 TRAIPQ9BWF2 469 aa17.4■□□□□ 0.38
SEC13-210ENST00000428626 S1PR5Q9H228 398 aa17.4■□□□□ 0.38
SEC13-210ENST00000428626 DHX33Q9H6R0 707 aaKnown RBP17.4■□□□□ 0.38
SEC13-210ENST00000428626 MINDY3Q9H8M7 445 aa17.4■□□□□ 0.38
SEC13-210ENST00000428626 CHST12Q9NRB3 414 aa17.4■□□□□ 0.38
SEC13-210ENST00000428626 BMP2KQ9NSY1 1161 aaPredicted RBP17.4■□□□□ 0.38
SEC13-210ENST00000428626 DACT1Q9NYF0 836 aa17.4■□□□□ 0.38
SEC13-210ENST00000428626 SPG21Q9NZD8 308 aa17.4■□□□□ 0.38
SEC13-210ENST00000428626 CDH22Q9UJ99 828 aa17.4■□□□□ 0.38
SEC13-210ENST00000428626 PIN4Q9Y237 131 aaKnown RBP17.4■□□□□ 0.38
SEC13-210ENST00000428626 ARIH1Q9Y4X5 557 aaPredicted RBP17.4■□□□□ 0.38
SEC13-210ENST00000428626 ARID2Q68CP9 1835 aa17.4■□□□□ 0.38
SEC13-210ENST00000428626 P4HBP07237 508 aaKnown RBP17.39■□□□□ 0.37
SEC13-210ENST00000428626 GCFC2P16383 781 aaKnown RBP17.39■□□□□ 0.37
SEC13-210ENST00000428626 DNM2P50570 870 aa17.39■□□□□ 0.37
SEC13-210ENST00000428626 ANAPC15P60006 121 aa17.39■□□□□ 0.37
SEC13-210ENST00000428626 ST3GAL1Q11201 340 aa17.39■□□□□ 0.37
SEC13-210ENST00000428626 CBX2Q14781 532 aaPredicted RBP17.39■□□□□ 0.37
SEC13-210ENST00000428626 PDE12Q6L8Q7 609 aaKnown RBP17.39■□□□□ 0.37
SEC13-210ENST00000428626 LLGL2Q6P1M3 1020 aa17.39■□□□□ 0.37
SEC13-210ENST00000428626 TMEM184AQ6ZMB5 413 aa17.39■□□□□ 0.37
SEC13-210ENST00000428626 BCL7CQ8WUZ0 217 aaPredicted RBP17.39■□□□□ 0.37
SEC13-210ENST00000428626 TMEM143Q96AN5 459 aa17.39■□□□□ 0.37
SEC13-210ENST00000428626 DYDC2Q96IM9 177 aa17.39■□□□□ 0.37
SEC13-210ENST00000428626 CDCA3Q99618 268 aaPredicted RBP17.39■□□□□ 0.37
SEC13-210ENST00000428626 LXNQ9BS40 222 aa17.39■□□□□ 0.37
SEC13-210ENST00000428626 APOL5Q9BWW9 433 aa17.39■□□□□ 0.37
SEC13-210ENST00000428626 ENTPD7Q9NQZ7 604 aa17.39■□□□□ 0.37
SEC13-210ENST00000428626 WDFY4Q6ZS81 3184 aa17.39■□□□□ 0.37
SEC13-210ENST00000428626 TBX3O15119 743 aa17.38■□□□□ 0.37
SEC13-210ENST00000428626 JAK2O60674 1132 aa17.38■□□□□ 0.37
SEC13-210ENST00000428626 SFPQP23246 707 aaKnown RBP eCLIP17.38■□□□□ 0.37
SEC13-210ENST00000428626 HOXA11P31270 313 aaPredicted RBP17.38■□□□□ 0.37
SEC13-210ENST00000428626 PPM1AP35813 382 aa17.38■□□□□ 0.37
SEC13-210ENST00000428626 AFF1P51825 1210 aaKnown RBP17.38■□□□□ 0.37
SEC13-210ENST00000428626 BCAR1P56945 870 aa17.38■□□□□ 0.37
SEC13-210ENST00000428626 CDC42EP1Q00587 391 aa17.38■□□□□ 0.37
SEC13-210ENST00000428626 CTTNQ14247 550 aaKnown RBP17.38■□□□□ 0.37
SEC13-210ENST00000428626 EPHA7Q15375 998 aa17.38■□□□□ 0.37
SEC13-210ENST00000428626 TWF2Q6IBS0 349 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms