RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 VAV3Q9UKW4 847 aa17.32■□□□□ 0.36
CTDSP1-202ENST00000428361 MBTPS2O43462 519 aa17.31■□□□□ 0.36
CTDSP1-202ENST00000428361 TBX10O75333 385 aa17.31■□□□□ 0.36
CTDSP1-202ENST00000428361 DNAJB1P25685 340 aa17.31■□□□□ 0.36
CTDSP1-202ENST00000428361 NRIP1P48552 1158 aa17.31■□□□□ 0.36
CTDSP1-202ENST00000428361 TWF2Q6IBS0 349 aaKnown RBP17.31■□□□□ 0.36
CTDSP1-202ENST00000428361 KCNT2Q6UVM3 1135 aa17.31■□□□□ 0.36
CTDSP1-202ENST00000428361 ANO5Q75V66 913 aa17.31■□□□□ 0.36
CTDSP1-202ENST00000428361 RNF169Q8NCN4 708 aa17.31■□□□□ 0.36
CTDSP1-202ENST00000428361 PSPC1Q8WXF1 523 aaKnown RBP17.31■□□□□ 0.36
CTDSP1-202ENST00000428361 CEP170P1Q96L14 293 aa17.31■□□□□ 0.36
CTDSP1-202ENST00000428361 CASD1Q96PB1 797 aa17.31■□□□□ 0.36
CTDSP1-202ENST00000428361 CEP89Q96ST8 783 aa17.31■□□□□ 0.36
CTDSP1-202ENST00000428361 CWH43Q9H720 699 aa17.31■□□□□ 0.36
CTDSP1-202ENST00000428361 ZSWIM4Q9H7M6 989 aa17.31■□□□□ 0.36
CTDSP1-202ENST00000428361 ARIH1Q9Y4X5 557 aaPredicted RBP17.31■□□□□ 0.36
CTDSP1-202ENST00000428361 ATG2AQ2TAZ0 1938 aa17.31■□□□□ 0.36
CTDSP1-202ENST00000428361 A0A087WZ62 844 aa17.3■□□□□ 0.36
CTDSP1-202ENST00000428361 ASAP2O43150 1006 aa17.3■□□□□ 0.36
CTDSP1-202ENST00000428361 STBD1O95210 358 aa17.3■□□□□ 0.36
CTDSP1-202ENST00000428361 EYA4O95677 639 aa17.3■□□□□ 0.36
CTDSP1-202ENST00000428361 IRS1P35568 1242 aa17.3■□□□□ 0.36
CTDSP1-202ENST00000428361 ALDH7A1P49419 539 aaKnown RBP17.3■□□□□ 0.36
CTDSP1-202ENST00000428361 NEK4P51957 841 aa17.3■□□□□ 0.36
CTDSP1-202ENST00000428361 COASYQ13057 564 aa17.3■□□□□ 0.36
CTDSP1-202ENST00000428361 PCBP1Q15365 356 aaKnown RBP eCLIP17.3■□□□□ 0.36
CTDSP1-202ENST00000428361 CATSPER4Q7RTX7 472 aa17.3■□□□□ 0.36
CTDSP1-202ENST00000428361 PGBD4Q96DM1 585 aa17.3■□□□□ 0.36
CTDSP1-202ENST00000428361 ZNF668Q96K58 619 aaPredicted RBP17.3■□□□□ 0.36
CTDSP1-202ENST00000428361 NLRP4Q96MN2 994 aa17.3■□□□□ 0.36
CTDSP1-202ENST00000428361 FDXACB1Q9BRP7 624 aaPredicted RBP17.3■□□□□ 0.36
CTDSP1-202ENST00000428361 LXNQ9BS40 222 aa17.3■□□□□ 0.36
CTDSP1-202ENST00000428361 ENTPD7Q9NQZ7 604 aa17.3■□□□□ 0.36
CTDSP1-202ENST00000428361 SPG21Q9NZD8 308 aa17.3■□□□□ 0.36
CTDSP1-202ENST00000428361 PIN4Q9Y237 131 aaKnown RBP17.3■□□□□ 0.36
CTDSP1-202ENST00000428361 COL4A3BPQ9Y5P4 624 aa17.3■□□□□ 0.36
CTDSP1-202ENST00000428361 C19orf67A6NJJ6 358 aa17.29■□□□□ 0.36
CTDSP1-202ENST00000428361 EML1O00423 815 aa17.29■□□□□ 0.36
CTDSP1-202ENST00000428361 DCXO43602 365 aa17.29■□□□□ 0.36
CTDSP1-202ENST00000428361 CTDNEP1O95476 244 aa17.29■□□□□ 0.36
CTDSP1-202ENST00000428361 YWHABP31946 246 aaKnown RBP17.29■□□□□ 0.36
CTDSP1-202ENST00000428361 PHKA2P46019 1235 aa17.29■□□□□ 0.36
CTDSP1-202ENST00000428361 DRP2Q13474 957 aa17.29■□□□□ 0.36
CTDSP1-202ENST00000428361 SAFBQ15424 915 aaKnown RBP eCLIP17.29■□□□□ 0.36
CTDSP1-202ENST00000428361 CLUL1Q15846 466 aa17.29■□□□□ 0.36
CTDSP1-202ENST00000428361 ME3Q16798 604 aa17.29■□□□□ 0.36
CTDSP1-202ENST00000428361 NCAPH2Q6IBW4 605 aa17.29■□□□□ 0.36
CTDSP1-202ENST00000428361 GLB1LQ6UWU2 654 aa17.29■□□□□ 0.36
CTDSP1-202ENST00000428361 SRGAP1Q7Z6B7 1085 aa17.29■□□□□ 0.36
CTDSP1-202ENST00000428361 RBM23Q86U06 439 aaKnown RBP17.29■□□□□ 0.36
CTDSP1-202ENST00000428361 ZNF598Q86UK7 904 aaKnown RBP17.29■□□□□ 0.36
CTDSP1-202ENST00000428361 POTEDQ86YR6 584 aa17.29■□□□□ 0.36
CTDSP1-202ENST00000428361 SMRP1Q8NCR6 262 aa17.29■□□□□ 0.36
CTDSP1-202ENST00000428361 OXER1Q8TDS5 423 aa17.29■□□□□ 0.36
CTDSP1-202ENST00000428361 MSLNLQ96KJ4 702 aa17.29■□□□□ 0.36
CTDSP1-202ENST00000428361 CCDC43Q96MW1 224 aaKnown RBP17.29■□□□□ 0.36
CTDSP1-202ENST00000428361 TCF25Q9BQ70 676 aa17.29■□□□□ 0.36
CTDSP1-202ENST00000428361 LRFN3Q9BTN0 628 aa17.29■□□□□ 0.36
CTDSP1-202ENST00000428361 DHX33Q9H6R0 707 aaKnown RBP17.29■□□□□ 0.36
CTDSP1-202ENST00000428361 CD320Q9NPF0 282 aa17.29■□□□□ 0.36
CTDSP1-202ENST00000428361 STK39Q9UEW8 545 aa17.29■□□□□ 0.36
CTDSP1-202ENST00000428361 PCDHA12Q9UN75 941 aa17.29■□□□□ 0.36
CTDSP1-202ENST00000428361 PRR33A8MZF0 331 aa17.28■□□□□ 0.36
CTDSP1-202ENST00000428361 FSCN2O14926 492 aa17.28■□□□□ 0.36
CTDSP1-202ENST00000428361 GTF2F1P35269 517 aaKnown RBP eCLIP17.28■□□□□ 0.368e-11■■■□□ 18.7
CTDSP1-202ENST00000428361 DLX2Q07687 328 aaPredicted RBP17.28■□□□□ 0.36
CTDSP1-202ENST00000428361 NCBP1Q09161 790 aaKnown RBP17.28■□□□□ 0.36
CTDSP1-202ENST00000428361 CALCRLQ16602 461 aa17.28■□□□□ 0.36
CTDSP1-202ENST00000428361 DUSP6Q16828 381 aa17.28■□□□□ 0.36
CTDSP1-202ENST00000428361 PLA2G4FQ68DD2 849 aa17.28■□□□□ 0.36
CTDSP1-202ENST00000428361 ADGRD2Q7Z7M1 963 aa17.28■□□□□ 0.36
CTDSP1-202ENST00000428361 NSUN7Q8NE18 718 aaKnown RBP17.28■□□□□ 0.36
CTDSP1-202ENST00000428361 HAS1Q92839 578 aa17.28■□□□□ 0.36
CTDSP1-202ENST00000428361 TMEM169Q96HH4 297 aa17.28■□□□□ 0.36
CTDSP1-202ENST00000428361 RNF19AQ9NV58 838 aa17.28■□□□□ 0.36
CTDSP1-202ENST00000428361 PLXNA4Q9HCM2 1894 aa17.28■□□□□ 0.36
CTDSP1-202ENST00000428361 TMEM150BA6NC51 233 aa17.27■□□□□ 0.36
CTDSP1-202ENST00000428361 LINC01565O15544 149 aa17.27■□□□□ 0.36
CTDSP1-202ENST00000428361 NEMFO60524 1076 aa17.27■□□□□ 0.36
CTDSP1-202ENST00000428361 ZNF623O75123 536 aa17.27■□□□□ 0.36
CTDSP1-202ENST00000428361 CENPBP07199 599 aaPredicted RBP17.27■□□□□ 0.36
CTDSP1-202ENST00000428361 FGFR4P22455 802 aa17.27■□□□□ 0.36
CTDSP1-202ENST00000428361 MXD4Q14582 209 aaPredicted RBP17.27■□□□□ 0.36
CTDSP1-202ENST00000428361 SMC1AQ14683 1233 aaKnown RBP17.27■□□□□ 0.36
CTDSP1-202ENST00000428361 CLLU1OSQ5K130 101 aa17.27■□□□□ 0.36
CTDSP1-202ENST00000428361 PLPP4Q5VZY2 271 aa17.27■□□□□ 0.36
CTDSP1-202ENST00000428361 TMC7Q7Z402 723 aa17.27■□□□□ 0.36
CTDSP1-202ENST00000428361 DIS3L2Q8IYB7 885 aaKnown RBP17.27■□□□□ 0.36
CTDSP1-202ENST00000428361 NECAB1Q8N987 351 aa17.27■□□□□ 0.36
CTDSP1-202ENST00000428361 URGCPQ8TCY9 931 aa17.27■□□□□ 0.36
CTDSP1-202ENST00000428361 HELQQ8TDG4 1101 aa17.27■□□□□ 0.36
CTDSP1-202ENST00000428361 MTRQ99707 1265 aa17.27■□□□□ 0.36
CTDSP1-202ENST00000428361 SH2D3AQ9BRG2 576 aa17.27■□□□□ 0.36
CTDSP1-202ENST00000428361 AGPAT5Q9NUQ2 364 aa17.27■□□□□ 0.36
CTDSP1-202ENST00000428361 FAM105AQ9NUU6 356 aa17.27■□□□□ 0.36
CTDSP1-202ENST00000428361 FDPSP14324 419 aaKnown RBP17.26■□□□□ 0.35
CTDSP1-202ENST00000428361 HOXB8P17481 243 aaPredicted RBP17.26■□□□□ 0.35
CTDSP1-202ENST00000428361 NPEPPSP55786 919 aa17.26■□□□□ 0.35
CTDSP1-202ENST00000428361 ERVFC1P60507 584 aa17.26■□□□□ 0.35
CTDSP1-202ENST00000428361 NR5A1Q13285 461 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms