RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 POLD4Q9HCU8 107 aa16.57■□□□□ 0.24
RTN4-210ENST00000427710 GPRC5CQ9NQ84 441 aa16.57■□□□□ 0.24
RTN4-210ENST00000427710 HCSTQ9UBK5 93 aa16.57■□□□□ 0.24
RTN4-210ENST00000427710 LRWD1Q9UFC0 647 aa16.57■□□□□ 0.24
RTN4-210ENST00000427710 PPME1Q9Y570 386 aa16.57■□□□□ 0.24
RTN4-210ENST00000427710 MRPL42Q9Y6G3 142 aaKnown RBP16.57■□□□□ 0.24
RTN4-210ENST00000427710 TBKBP1A7MCY6 615 aa16.56■□□□□ 0.24
RTN4-210ENST00000427710 GTPBP6O43824 516 aaPredicted RBP16.56■□□□□ 0.24
RTN4-210ENST00000427710 CSPG5O95196 566 aa16.56■□□□□ 0.24
RTN4-210ENST00000427710 LINC00271P0C7V0 271 aa16.56■□□□□ 0.24
RTN4-210ENST00000427710 RPA1P27694 616 aa16.56■□□□□ 0.24
RTN4-210ENST00000427710 CTNNB1P35222 781 aa16.56■□□□□ 0.24
RTN4-210ENST00000427710 LONRF3Q496Y0 759 aa16.56■□□□□ 0.24
RTN4-210ENST00000427710 RILPL1Q5EBL4 403 aa16.56■□□□□ 0.24
RTN4-210ENST00000427710 SLC24A5Q71RS6 500 aa16.56■□□□□ 0.24
RTN4-210ENST00000427710 CATSPER4Q7RTX7 472 aa16.56■□□□□ 0.24
RTN4-210ENST00000427710 RNF169Q8NCN4 708 aa16.56■□□□□ 0.24
RTN4-210ENST00000427710 SNX29Q8TEQ0 813 aa16.56■□□□□ 0.24
RTN4-210ENST00000427710 TCP11Q8WWU5 503 aa16.56■□□□□ 0.24
RTN4-210ENST00000427710 C1orf112Q9NSG2 853 aa16.56■□□□□ 0.24
RTN4-210ENST00000427710 FAM189BP81408 668 aa16.55■□□□□ 0.24
RTN4-210ENST00000427710 GPM6BQ13491 265 aa16.55■□□□□ 0.24
RTN4-210ENST00000427710 DTHD1Q6ZMT9 781 aa16.55■□□□□ 0.24
RTN4-210ENST00000427710 ECHDC2Q86YB7 292 aa16.55■□□□□ 0.24
RTN4-210ENST00000427710 EXOC8Q8IYI6 725 aa16.55■□□□□ 0.24
RTN4-210ENST00000427710 ZNF710Q8N1W2 664 aa16.55■□□□□ 0.24
RTN4-210ENST00000427710 IGSF22Q8N9C0 903 aa16.55■□□□□ 0.24
RTN4-210ENST00000427710 RNF149Q8NC42 400 aa16.55■□□□□ 0.24
RTN4-210ENST00000427710 NACC1Q96RE7 527 aa16.55■□□□□ 0.24
RTN4-210ENST00000427710 POLR3FQ9H1D9 316 aaPredicted RBP16.55■□□□□ 0.24
RTN4-210ENST00000427710 RNF19AQ9NV58 838 aa16.55■□□□□ 0.24
RTN4-210ENST00000427710 KIAA1024Q9UPX6 916 aa16.55■□□□□ 0.24
RTN4-210ENST00000427710 PIN4Q9Y237 131 aaKnown RBP16.55■□□□□ 0.24
RTN4-210ENST00000427710 TRIP11Q15643 1979 aa16.55■□□□□ 0.24
RTN4-210ENST00000427710 A0A0C4DFX4 3053 aa16.54■□□□□ 0.24
RTN4-210ENST00000427710 DGAT1O75907 488 aa16.54■□□□□ 0.24
RTN4-210ENST00000427710 SYT1P21579 422 aa16.54■□□□□ 0.24
RTN4-210ENST00000427710 SFPQP23246 707 aaKnown RBP eCLIP16.54■□□□□ 0.24
RTN4-210ENST00000427710 GLRA2P23416 452 aa16.54■□□□□ 0.24
RTN4-210ENST00000427710 ARL2P36404 184 aa16.54■□□□□ 0.24
RTN4-210ENST00000427710 ATP2C1P98194 919 aaPredicted RBP16.54■□□□□ 0.24
RTN4-210ENST00000427710 CDC42EP1Q00587 391 aa16.54■□□□□ 0.24
RTN4-210ENST00000427710 CAPSQ13938 189 aa16.54■□□□□ 0.24
RTN4-210ENST00000427710 ZRSR1Q15695 479 aaKnown RBP16.54■□□□□ 0.24
RTN4-210ENST00000427710 FAM173BQ6P4H8 233 aa16.54■□□□□ 0.24
RTN4-210ENST00000427710 CMTR2Q8IYT2 770 aaKnown RBP16.54■□□□□ 0.24
RTN4-210ENST00000427710 DDX19AQ9NUU7 478 aaKnown RBP16.54■□□□□ 0.24
RTN4-210ENST00000427710 DBR1Q9UK59 544 aaKnown RBP16.54■□□□□ 0.24
RTN4-210ENST00000427710 ARHGEF35A5YM69 484 aa16.53■□□□□ 0.24
RTN4-210ENST00000427710 VWA3AA6NCI4 1184 aa16.53■□□□□ 0.24
RTN4-210ENST00000427710 GAS2O43903 313 aaKnown RBP16.53■□□□□ 0.24
RTN4-210ENST00000427710 XRCC6P12956 609 aaKnown RBP eCLIP16.53■□□□□ 0.24
RTN4-210ENST00000427710 ATF7P17544 494 aaPredicted RBP16.53■□□□□ 0.24
RTN4-210ENST00000427710 POU3F3P20264 500 aaPredicted RBP16.53■□□□□ 0.24
RTN4-210ENST00000427710 BMPR1AP36894 532 aa16.53■□□□□ 0.24
RTN4-210ENST00000427710 PRPHP41219 470 aa16.53■□□□□ 0.24
RTN4-210ENST00000427710 PDIA5Q14554 519 aa16.53■□□□□ 0.24
RTN4-210ENST00000427710 SPOUT1Q5T280 376 aaKnown RBP16.53■□□□□ 0.24
RTN4-210ENST00000427710 HAUS3Q68CZ6 603 aa16.53■□□□□ 0.24
RTN4-210ENST00000427710 TWF2Q6IBS0 349 aaKnown RBP16.53■□□□□ 0.24
RTN4-210ENST00000427710 PADI6Q6TGC4 694 aa16.53■□□□□ 0.24
RTN4-210ENST00000427710 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.53■□□□□ 0.246e-6■□□□□ 8.7
RTN4-210ENST00000427710 LPPQ93052 612 aa16.53■□□□□ 0.24
RTN4-210ENST00000427710 SNX21Q969T3 373 aa16.53■□□□□ 0.24
RTN4-210ENST00000427710 SAMD11Q96NU1 681 aa16.53■□□□□ 0.24
RTN4-210ENST00000427710 PLIN2Q99541 437 aa16.53■□□□□ 0.24
RTN4-210ENST00000427710 MMTAG2Q9BU76 263 aaKnown RBP16.53■□□□□ 0.24
RTN4-210ENST00000427710 INO80BQ9C086 356 aaPredicted RBP16.53■□□□□ 0.24
RTN4-210ENST00000427710 TMEM161AQ9NX61 479 aa16.53■□□□□ 0.24
RTN4-210ENST00000427710 E9PMD0 336 aa16.52■□□□□ 0.24
RTN4-210ENST00000427710 LAD1O00515 517 aa16.52■□□□□ 0.24
RTN4-210ENST00000427710 ASAP2O43150 1006 aa16.52■□□□□ 0.24
RTN4-210ENST00000427710 RESTQ13127 1097 aa16.52■□□□□ 0.24
RTN4-210ENST00000427710 SKIV2LQ15477 1246 aaKnown RBP16.52■□□□□ 0.24
RTN4-210ENST00000427710 KCNK18Q7Z418 384 aa16.52■□□□□ 0.24
RTN4-210ENST00000427710 SRGAP1Q7Z6B7 1085 aa16.52■□□□□ 0.24
RTN4-210ENST00000427710 HSCBQ8IWL3 235 aa16.52■□□□□ 0.24
RTN4-210ENST00000427710 SPRYD3Q8NCJ5 442 aa16.52■□□□□ 0.24
RTN4-210ENST00000427710 BSNDQ8WZ55 320 aa16.52■□□□□ 0.24
RTN4-210ENST00000427710 CLP1Q92989 425 aaKnown RBP16.52■□□□□ 0.24
RTN4-210ENST00000427710 INTS4Q96HW7 963 aaKnown RBP16.52■□□□□ 0.24
RTN4-210ENST00000427710 CPB2Q96IY4 423 aa16.52■□□□□ 0.24
RTN4-210ENST00000427710 RAB34Q9BZG1 259 aa16.52■□□□□ 0.24
RTN4-210ENST00000427710 BHMT2Q9H2M3 363 aa16.52■□□□□ 0.24
RTN4-210ENST00000427710 MTMR6Q9Y217 621 aa16.52■□□□□ 0.24
RTN4-210ENST00000427710 TDRD15B5MCY1 1934 aaKnown RBP16.52■□□□□ 0.23
RTN4-210ENST00000427710 MEIS3P2A8K0S8 358 aa16.51■□□□□ 0.23
RTN4-210ENST00000427710 H3BNC9 293 aa16.51■□□□□ 0.23
RTN4-210ENST00000427710 GRM6O15303 877 aa16.51■□□□□ 0.23
RTN4-210ENST00000427710 PDCP20941 246 aa16.51■□□□□ 0.23
RTN4-210ENST00000427710 PHKA2P46019 1235 aa16.51■□□□□ 0.23
RTN4-210ENST00000427710 PTENP60484 403 aa16.51■□□□□ 0.23
RTN4-210ENST00000427710 GRIN1Q05586 938 aa16.51■□□□□ 0.23
RTN4-210ENST00000427710 MXD4Q14582 209 aaPredicted RBP16.51■□□□□ 0.23
RTN4-210ENST00000427710 SF3A1Q15459 793 aaKnown RBP16.51■□□□□ 0.23
RTN4-210ENST00000427710 CLLU1OSQ5K130 101 aa16.51■□□□□ 0.23
RTN4-210ENST00000427710 FOXD4L5Q5VV16 416 aaPredicted RBP16.51■□□□□ 0.23
RTN4-210ENST00000427710 KRT79Q5XKE5 535 aa16.51■□□□□ 0.23
RTN4-210ENST00000427710 LRRC55Q6ZSA7 311 aa16.51■□□□□ 0.23
RTN4-210ENST00000427710 BRAPQ7Z569 592 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms