RNA–Protein interactions for RNA: ENST00000427526.6

LIG1-202, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-202ENST00000427526 FAM169AQ9Y6X4 670 aa15.54■□□□□ 0.08
LIG1-202ENST00000427526 A0A087WUV0 522 aaPredicted RBP15.53■□□□□ 0.08
LIG1-202ENST00000427526 CCDC188H7C350 402 aa15.53■□□□□ 0.08
LIG1-202ENST00000427526 EVI5O60447 810 aa15.53■□□□□ 0.08
LIG1-202ENST00000427526 PSMD10O75832 226 aa15.53■□□□□ 0.08
LIG1-202ENST00000427526 ZNF76P36508 570 aa15.53■□□□□ 0.08
LIG1-202ENST00000427526 STAT1P42224 750 aa15.53■□□□□ 0.08
LIG1-202ENST00000427526 PRELPP51888 382 aa15.53■□□□□ 0.08
LIG1-202ENST00000427526 TNIP1Q15025 636 aa15.53■□□□□ 0.08
LIG1-202ENST00000427526 ZC2HC1CQ53FD0 456 aaPredicted RBP15.53■□□□□ 0.08
LIG1-202ENST00000427526 FAM186BQ8IYM0 893 aa15.53■□□□□ 0.08
LIG1-202ENST00000427526 SYT11Q9BT88 431 aa15.53■□□□□ 0.08
LIG1-202ENST00000427526 F8VZ95 297 aa15.53■□□□□ 0.08
LIG1-202ENST00000427526 CPP00450 1065 aa15.53■□□□□ 0.08
LIG1-202ENST00000427526 HSD17B3P37058 310 aa15.53■□□□□ 0.08
LIG1-202ENST00000427526 GALCP54803 685 aa15.53■□□□□ 0.08
LIG1-202ENST00000427526 LRIG3Q6UXM1 1119 aa15.53■□□□□ 0.08
LIG1-202ENST00000427526 SLC30A10Q6XR72 485 aa15.53■□□□□ 0.08
LIG1-202ENST00000427526 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.53■□□□□ 0.08
LIG1-202ENST00000427526 PACS2Q86VP3 889 aa15.53■□□□□ 0.08
LIG1-202ENST00000427526 SYCE1Q8N0S2 351 aa15.53■□□□□ 0.08
LIG1-202ENST00000427526 MKNK1Q9BUB5 465 aa15.53■□□□□ 0.08
LIG1-202ENST00000427526 STK33Q9BYT3 514 aa15.53■□□□□ 0.08
LIG1-202ENST00000427526 GJA3Q9Y6H8 435 aa15.53■□□□□ 0.08
LIG1-202ENST00000427526 HMGB1P1B2RPK0 211 aaPredicted RBP15.52■□□□□ 0.08
LIG1-202ENST00000427526 ZBTB39O15060 712 aa15.52■□□□□ 0.08
LIG1-202ENST00000427526 CFBP00751 764 aa15.52■□□□□ 0.08
LIG1-202ENST00000427526 NR1D1P20393 614 aa15.52■□□□□ 0.08
LIG1-202ENST00000427526 SOX5P35711 763 aa15.52■□□□□ 0.08
LIG1-202ENST00000427526 ITGB3BPQ13352 177 aaPredicted RBP15.52■□□□□ 0.08
LIG1-202ENST00000427526 PPP2R5CQ13362 524 aa15.52■□□□□ 0.08
LIG1-202ENST00000427526 UAP1Q16222 522 aaPredicted RBP15.52■□□□□ 0.08
LIG1-202ENST00000427526 DDX42Q86XP3 938 aaKnown RBP eCLIP15.52■□□□□ 0.08
LIG1-202ENST00000427526 MYCT1Q8N699 235 aa15.52■□□□□ 0.08
LIG1-202ENST00000427526 U2AF1L4Q8WU68 220 aaKnown RBP15.52■□□□□ 0.08
LIG1-202ENST00000427526 GPR88Q9GZN0 384 aa15.52■□□□□ 0.08
LIG1-202ENST00000427526 DDX47Q9H0S4 455 aaKnown RBP15.52■□□□□ 0.08
LIG1-202ENST00000427526 NEUROG2Q9H2A3 272 aa15.52■□□□□ 0.08
LIG1-202ENST00000427526 TMBIM4Q9HC24 238 aa15.52■□□□□ 0.08
LIG1-202ENST00000427526 DMAC2Q9NW81 257 aa15.52■□□□□ 0.08
LIG1-202ENST00000427526 SMCHD1A6NHR9 2005 aa15.52■□□□□ 0.08
LIG1-202ENST00000427526 PHF20L1A8MW92 1017 aa15.52■□□□□ 0.07
LIG1-202ENST00000427526 TMCO5BA8MYB1 307 aa15.52■□□□□ 0.07
LIG1-202ENST00000427526 KRIT1O00522 736 aa15.52■□□□□ 0.07
LIG1-202ENST00000427526 FAM13AO94988 1023 aa15.52■□□□□ 0.07
LIG1-202ENST00000427526 ITGA4P13612 1032 aa15.52■□□□□ 0.07
LIG1-202ENST00000427526 LSP1P33241 339 aa15.52■□□□□ 0.07
LIG1-202ENST00000427526 FMO5P49326 533 aa15.52■□□□□ 0.07
LIG1-202ENST00000427526 MAP3K10Q02779 954 aa15.52■□□□□ 0.07
LIG1-202ENST00000427526 TBC1D10BQ4KMP7 808 aaPredicted RBP15.52■□□□□ 0.07
LIG1-202ENST00000427526 ZNF720Q7Z2F6 126 aa15.52■□□□□ 0.07
LIG1-202ENST00000427526 DAAM2Q86T65 1068 aa15.52■□□□□ 0.07
LIG1-202ENST00000427526 TADA2BQ86TJ2 420 aa15.52■□□□□ 0.07
LIG1-202ENST00000427526 SEC14L1Q92503 715 aa15.52■□□□□ 0.07
LIG1-202ENST00000427526 DYDC2Q96IM9 177 aa15.52■□□□□ 0.07
LIG1-202ENST00000427526 TEPSINQ96N21 525 aa15.52■□□□□ 0.07
LIG1-202ENST00000427526 TTC7AQ9ULT0 858 aaPredicted RBP15.52■□□□□ 0.07
LIG1-202ENST00000427526 GMPSP49915 693 aaPredicted RBP15.52■□□□□ 0.07
LIG1-202ENST00000427526 ZNF131P52739 623 aa15.52■□□□□ 0.07
LIG1-202ENST00000427526 ZNF280AP59817 542 aaPredicted RBP15.52■□□□□ 0.07
LIG1-202ENST00000427526 GUCY1A3Q02108 690 aa15.52■□□□□ 0.07
LIG1-202ENST00000427526 HLTFQ14527 1009 aaKnown RBP eCLIP15.52■□□□□ 0.07
LIG1-202ENST00000427526 COG2Q14746 738 aa15.52■□□□□ 0.07
LIG1-202ENST00000427526 TPH2Q8IWU9 490 aa15.52■□□□□ 0.07
LIG1-202ENST00000427526 MICALL2Q8IY33 904 aa15.52■□□□□ 0.07
LIG1-202ENST00000427526 PROCA1Q8NCQ7 364 aaPredicted RBP15.52■□□□□ 0.07
LIG1-202ENST00000427526 CHURC1Q8WUH1 139 aa15.52■□□□□ 0.07
LIG1-202ENST00000427526 ZNF341Q9BYN7 854 aa15.52■□□□□ 0.07
LIG1-202ENST00000427526 PARVGQ9HBI0 331 aa15.52■□□□□ 0.07
LIG1-202ENST00000427526 ASNSP08243 561 aa15.51■□□□□ 0.07
LIG1-202ENST00000427526 DGKZQ13574 1117 aa15.51■□□□□ 0.07
LIG1-202ENST00000427526 CEP85LQ5SZL2 805 aa15.51■□□□□ 0.07
LIG1-202ENST00000427526 SLC5A5Q92911 643 aa15.51■□□□□ 0.07
LIG1-202ENST00000427526 EPN3Q9H201 632 aa15.51■□□□□ 0.07
LIG1-202ENST00000427526 SLITRK6Q9H5Y7 841 aa15.51■□□□□ 0.07
LIG1-202ENST00000427526 POU5F1Q01860 360 aaKnown RBP15.51■□□□□ 0.07
LIG1-202ENST00000427526 PPATQ06203 517 aa15.51■□□□□ 0.07
LIG1-202ENST00000427526 DRAP1Q14919 205 aaPredicted RBP15.51■□□□□ 0.07
LIG1-202ENST00000427526 CBWD6Q4V339 395 aa15.51■□□□□ 0.07
LIG1-202ENST00000427526 CBWD3Q5JTY5 395 aa15.51■□□□□ 0.07
LIG1-202ENST00000427526 CBWD5Q5RIA9 395 aa15.51■□□□□ 0.07
LIG1-202ENST00000427526 GLYCTKQ8IVS8 523 aa15.51■□□□□ 0.07
LIG1-202ENST00000427526 KSR1Q8IVT5 923 aa15.51■□□□□ 0.07
LIG1-202ENST00000427526 RANBP17Q9H2T7 1088 aaKnown RBP15.51■□□□□ 0.07
LIG1-202ENST00000427526 OSGEPQ9NPF4 335 aa15.51■□□□□ 0.07
LIG1-202ENST00000427526 AMACRQ9UHK6 382 aa15.51■□□□□ 0.07
LIG1-202ENST00000427526 DNAJC12Q9UKB3 198 aa15.51■□□□□ 0.07
LIG1-202ENST00000427526 SAMM50Q9Y512 469 aa15.51■□□□□ 0.07
LIG1-202ENST00000427526 NCANO14594 1321 aa15.51■□□□□ 0.07
LIG1-202ENST00000427526 FRMPD4Q14CM0 1322 aa15.51■□□□□ 0.07
LIG1-202ENST00000427526 NDUFAB1O14561 156 aa15.5■□□□□ 0.07
LIG1-202ENST00000427526 TMEM253P0C7T8 217 aa15.5■□□□□ 0.07
LIG1-202ENST00000427526 LMNB1P20700 586 aa15.5■□□□□ 0.07
LIG1-202ENST00000427526 INPP5BP32019 993 aa15.5■□□□□ 0.07
LIG1-202ENST00000427526 UBXN2AP68543 259 aa15.5■□□□□ 0.07
LIG1-202ENST00000427526 LRCH2Q5VUJ6 765 aa15.5■□□□□ 0.07
LIG1-202ENST00000427526 SLC35G2Q8TBE7 412 aa15.5■□□□□ 0.07
LIG1-202ENST00000427526 LRRC45Q96CN5 670 aa15.5■□□□□ 0.07
LIG1-202ENST00000427526 SEL1LQ9UBV2 794 aa15.5■□□□□ 0.07
LIG1-202ENST00000427526 PPP1R12BO60237 982 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms