RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 TNPO1Q92973 898 aaKnown RBP8.3□□□□□ -1.08
LINC01049-201ENST00000426840 ATP6V0A1Q93050 837 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 WNT8BQ93098 351 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 ZBTB10Q96DT7 871 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 MMTAG2Q9BU76 263 aaKnown RBP8.3□□□□□ -1.08
LINC01049-201ENST00000426840 POLR3CQ9BUI4 534 aaPredicted RBP8.3□□□□□ -1.08
LINC01049-201ENST00000426840 ZMYND15Q9H091 742 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 ZSWIM4Q9H7M6 989 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 TUFT1Q9NNX1 390 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 PDLIM7Q9NR12 457 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 TMEM39AQ9NV64 488 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 FBXO2Q9UK22 296 aaPredicted RBP8.3□□□□□ -1.08
LINC01049-201ENST00000426840 RCOR1Q9UKL0 485 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 TBX21Q9UL17 535 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 PCDHB9Q9Y5E1 797 aa8.3□□□□□ -1.08
LINC01049-201ENST00000426840 SRPRBQ9Y5M8 271 aaKnown RBP8.3□□□□□ -1.08
LINC01049-201ENST00000426840 TMEM150BA6NC51 233 aa8.29□□□□□ -1.08
LINC01049-201ENST00000426840 VWA3AA6NCI4 1184 aa8.29□□□□□ -1.08
LINC01049-201ENST00000426840 PP2D1A8MPX8 630 aa8.29□□□□□ -1.08
LINC01049-201ENST00000426840 DKC1O60832 514 aaKnown RBP eCLIP8.29□□□□□ -1.08
LINC01049-201ENST00000426840 GPR37L1O60883 481 aa8.29□□□□□ -1.08
LINC01049-201ENST00000426840 ZIC2O95409 532 aaPredicted RBP8.29□□□□□ -1.08
LINC01049-201ENST00000426840 YEATS4O95619 227 aa8.29□□□□□ -1.08
LINC01049-201ENST00000426840 CLTBP09497 229 aa8.29□□□□□ -1.08
LINC01049-201ENST00000426840 GNAT1P11488 350 aa8.29□□□□□ -1.08
LINC01049-201ENST00000426840 LONP1P36776 959 aaKnown RBP8.29□□□□□ -1.08
LINC01049-201ENST00000426840 NPEPPSP55786 919 aa8.29□□□□□ -1.08
LINC01049-201ENST00000426840 IGBP1P78318 339 aa8.29□□□□□ -1.08
LINC01049-201ENST00000426840 PRKCEQ02156 737 aa8.29□□□□□ -1.08
LINC01049-201ENST00000426840 PTK7Q13308 1070 aa8.29□□□□□ -1.08
LINC01049-201ENST00000426840 MTHFD1LQ6UB35 978 aa8.29□□□□□ -1.08
LINC01049-201ENST00000426840 SERINC5Q86VE9 423 aa8.29□□□□□ -1.08
LINC01049-201ENST00000426840 NEK9Q8TD19 979 aa8.29□□□□□ -1.08
LINC01049-201ENST00000426840 FAM167AQ96KS9 214 aa8.29□□□□□ -1.08
LINC01049-201ENST00000426840 CLIC6Q96NY7 704 aa8.29□□□□□ -1.08
LINC01049-201ENST00000426840 KCTD15Q96SI1 283 aaPredicted RBP8.29□□□□□ -1.08
LINC01049-201ENST00000426840 LXNQ9BS40 222 aa8.29□□□□□ -1.08
LINC01049-201ENST00000426840 NOC4LQ9BVI4 516 aaKnown RBP8.29□□□□□ -1.08
LINC01049-201ENST00000426840 RAB34Q9BZG1 259 aa8.29□□□□□ -1.08
LINC01049-201ENST00000426840 ZFAND3Q9H8U3 227 aa8.29□□□□□ -1.08
LINC01049-201ENST00000426840 ATP13A2Q9NQ11 1180 aa8.29□□□□□ -1.08
LINC01049-201ENST00000426840 GMPR2Q9P2T1 348 aaKnown RBP8.29□□□□□ -1.08
LINC01049-201ENST00000426840 MAP4K5Q9Y4K4 846 aa8.29□□□□□ -1.08
LINC01049-201ENST00000426840 PCDHA2Q9Y5H9 948 aa8.29□□□□□ -1.08
LINC01049-201ENST00000426840 NR2E3Q9Y5X4 410 aa8.29□□□□□ -1.08
LINC01049-201ENST00000426840 COL1A2P08123 1366 aa8.29□□□□□ -1.08
LINC01049-201ENST00000426840 EVPLQ92817 2033 aa8.29□□□□□ -1.08
LINC01049-201ENST00000426840 TCHHQ07283 1943 aa8.29□□□□□ -1.08
LINC01049-201ENST00000426840 SPTLC2O15270 562 aa8.28□□□□□ -1.08
LINC01049-201ENST00000426840 PPP6R2O75170 966 aa8.28□□□□□ -1.08
LINC01049-201ENST00000426840 C22orf31O95567 290 aa8.28□□□□□ -1.08
LINC01049-201ENST00000426840 TIMP1P01033 207 aa8.28□□□□□ -1.08
LINC01049-201ENST00000426840 TIMP2P16035 220 aa8.28□□□□□ -1.08
LINC01049-201ENST00000426840 SYN1P17600 705 aa8.28□□□□□ -1.08
LINC01049-201ENST00000426840 MUTP22033 750 aa8.28□□□□□ -1.08
LINC01049-201ENST00000426840 CCT6AP40227 531 aaKnown RBP8.28□□□□□ -1.08
LINC01049-201ENST00000426840 RBL2Q08999 1139 aa8.28□□□□□ -1.08
LINC01049-201ENST00000426840 GRB10Q13322 594 aa8.28□□□□□ -1.08
LINC01049-201ENST00000426840 MCM6Q14566 821 aa8.28□□□□□ -1.08
LINC01049-201ENST00000426840 GPNMBQ14956 572 aa8.28□□□□□ -1.08
LINC01049-201ENST00000426840 STK38Q15208 465 aa8.28□□□□□ -1.08
LINC01049-201ENST00000426840 HYIQ5T013 277 aa8.28□□□□□ -1.08
LINC01049-201ENST00000426840 RUFY4Q6ZNE9 571 aa8.28□□□□□ -1.08
LINC01049-201ENST00000426840 USP49Q70CQ1 688 aa8.28□□□□□ -1.08
LINC01049-201ENST00000426840 OTUD6AQ7L8S5 288 aa8.28□□□□□ -1.08
LINC01049-201ENST00000426840 RPAINQ86UA6 219 aa8.28□□□□□ -1.08
LINC01049-201ENST00000426840 LINC01465Q8N7H1 131 aa8.28□□□□□ -1.08
LINC01049-201ENST00000426840 ERMNQ8TAM6 284 aa8.28□□□□□ -1.08
LINC01049-201ENST00000426840 PIGOQ8TEQ8 1089 aa8.28□□□□□ -1.08
LINC01049-201ENST00000426840 ITPKCQ96DU7 683 aa8.28□□□□□ -1.08
LINC01049-201ENST00000426840 AK8Q96MA6 479 aa8.28□□□□□ -1.08
LINC01049-201ENST00000426840 IPO9Q96P70 1041 aaKnown RBP8.28□□□□□ -1.08
LINC01049-201ENST00000426840 PNMA5Q96PV4 448 aa8.28□□□□□ -1.08
LINC01049-201ENST00000426840 NACC1Q96RE7 527 aa8.28□□□□□ -1.08
LINC01049-201ENST00000426840 SH2D3AQ9BRG2 576 aa8.28□□□□□ -1.08
LINC01049-201ENST00000426840 CSRNP2Q9H175 543 aa8.28□□□□□ -1.08
LINC01049-201ENST00000426840 GDPD2Q9HCC8 539 aa8.28□□□□□ -1.08
LINC01049-201ENST00000426840 ANKEF1Q9NU02 776 aa8.28□□□□□ -1.08
LINC01049-201ENST00000426840 CFAP45Q9UL16 551 aa8.28□□□□□ -1.08
LINC01049-201ENST00000426840 ZMYND8Q9ULU4 1186 aaPredicted RBP8.28□□□□□ -1.08
LINC01049-201ENST00000426840 MYH15Q9Y2K3 1946 aa8.28□□□□□ -1.08
LINC01049-201ENST00000426840 UMODL1Q5DID0 1318 aa8.28□□□□□ -1.08
LINC01049-201ENST00000426840 PDE4DIPQ5VU43 2346 aa8.28□□□□□ -1.08
LINC01049-201ENST00000426840 IGKV6-21A0A0C4DH24 114 aa8.27□□□□□ -1.09
LINC01049-201ENST00000426840 SMIM35A0A1B0GVV1 85 aa8.27□□□□□ -1.09
LINC01049-201ENST00000426840 H0YGN5 161 aa8.27□□□□□ -1.09
LINC01049-201ENST00000426840 MAGEB2O15479 319 aa8.27□□□□□ -1.09
LINC01049-201ENST00000426840 MAFO75444 373 aaPredicted RBP8.27□□□□□ -1.09
LINC01049-201ENST00000426840 CKBP12277 381 aa8.27□□□□□ -1.09
LINC01049-201ENST00000426840 YWHABP31946 246 aaKnown RBP8.27□□□□□ -1.09
LINC01049-201ENST00000426840 CYP2C18P33260 490 aa8.27□□□□□ -1.09
LINC01049-201ENST00000426840 ABL2P42684 1182 aa8.27□□□□□ -1.09
LINC01049-201ENST00000426840 MTERF2Q49AM1 385 aa8.27□□□□□ -1.09
LINC01049-201ENST00000426840 XKR9Q5GH70 373 aa8.27□□□□□ -1.09
LINC01049-201ENST00000426840 FAM26DQ5JW98 314 aa8.27□□□□□ -1.09
LINC01049-201ENST00000426840 SPECC1Q5M775 1068 aa8.27□□□□□ -1.09
LINC01049-201ENST00000426840 AXDND1Q5T1B0 1012 aaPredicted RBP8.27□□□□□ -1.09
LINC01049-201ENST00000426840 KRT79Q5XKE5 535 aa8.27□□□□□ -1.09
LINC01049-201ENST00000426840 PLA2G4FQ68DD2 849 aa8.27□□□□□ -1.09
LINC01049-201ENST00000426840 EFCAB12Q6NXP0 572 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms