RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 HERC4Q5GLZ8 1057 aaPredicted RBP11.32□□□□□ -0.6
GACAT3-201ENST00000426539 MIER3Q7Z3K6 550 aa11.32□□□□□ -0.6
GACAT3-201ENST00000426539 TRIM22Q8IYM9 498 aa11.32□□□□□ -0.6
GACAT3-201ENST00000426539 BLIDQ8IZY5 108 aa11.32□□□□□ -0.6
GACAT3-201ENST00000426539 RDM1Q8NG50 284 aa11.32□□□□□ -0.6
GACAT3-201ENST00000426539 MRPS27Q92552 414 aaKnown RBP11.32□□□□□ -0.6
GACAT3-201ENST00000426539 POP1Q99575 1024 aaKnown RBP11.32□□□□□ -0.6
GACAT3-201ENST00000426539 TM6SF1Q9BZW5 370 aa11.32□□□□□ -0.6
GACAT3-201ENST00000426539 LZTS1Q9Y250 596 aa11.32□□□□□ -0.6
GACAT3-201ENST00000426539 USP15Q9Y4E8 981 aaPredicted RBP11.32□□□□□ -0.6
GACAT3-201ENST00000426539 CYP46A1Q9Y6A2 500 aa11.32□□□□□ -0.6
GACAT3-201ENST00000426539 A0A0U1RQF3 1178 aa11.31□□□□□ -0.6
GACAT3-201ENST00000426539 HIDE1A8MVS5 230 aa11.31□□□□□ -0.6
GACAT3-201ENST00000426539 EML1O00423 815 aa11.31□□□□□ -0.6
GACAT3-201ENST00000426539 SLC37A4O43826 429 aa11.31□□□□□ -0.6
GACAT3-201ENST00000426539 ZSCAN20P17040 1043 aaPredicted RBP11.31□□□□□ -0.6
GACAT3-201ENST00000426539 TBC1D8BQ0IIM8 1120 aa11.31□□□□□ -0.6
GACAT3-201ENST00000426539 CBX2Q14781 532 aaPredicted RBP11.31□□□□□ -0.6
GACAT3-201ENST00000426539 CSPP1Q1MSJ5 1256 aa11.31□□□□□ -0.6
GACAT3-201ENST00000426539 INF2Q27J81 1249 aa11.31□□□□□ -0.6
GACAT3-201ENST00000426539 MTERF2Q49AM1 385 aa11.31□□□□□ -0.6
GACAT3-201ENST00000426539 XKR3Q5GH77 459 aa11.31□□□□□ -0.6
GACAT3-201ENST00000426539 PLPP4Q5VZY2 271 aa11.31□□□□□ -0.6
GACAT3-201ENST00000426539 KCNT2Q6UVM3 1135 aa11.31□□□□□ -0.6
GACAT3-201ENST00000426539 MOXD1Q6UVY6 613 aa11.31□□□□□ -0.6
GACAT3-201ENST00000426539 HFE2Q6ZVN8 426 aa11.31□□□□□ -0.6
GACAT3-201ENST00000426539 ZNF710Q8N1W2 664 aa11.31□□□□□ -0.6
GACAT3-201ENST00000426539 SUSD6Q92537 303 aa11.31□□□□□ -0.6
GACAT3-201ENST00000426539 C22orf23Q9BZE7 217 aa11.31□□□□□ -0.6
GACAT3-201ENST00000426539 S1PR5Q9H228 398 aa11.31□□□□□ -0.6
GACAT3-201ENST00000426539 SEPT9Q9UHD8 586 aaPredicted RBP11.31□□□□□ -0.6
GACAT3-201ENST00000426539 KCNJ14Q9UNX9 436 aa11.31□□□□□ -0.6
GACAT3-201ENST00000426539 A0A087WZ62 844 aa11.3□□□□□ -0.6
GACAT3-201ENST00000426539 CPLX1O14810 134 aa11.3□□□□□ -0.6
GACAT3-201ENST00000426539 HOXA2O43364 376 aa11.3□□□□□ -0.6
GACAT3-201ENST00000426539 SCRN1Q12765 414 aa11.3□□□□□ -0.6
GACAT3-201ENST00000426539 NONOQ15233 471 aaKnown RBP eCLIP11.3□□□□□ -0.6
GACAT3-201ENST00000426539 PDE12Q6L8Q7 609 aaKnown RBP11.3□□□□□ -0.6
GACAT3-201ENST00000426539 SYCE2Q6PIF2 218 aa11.3□□□□□ -0.6
GACAT3-201ENST00000426539 TMEM184AQ6ZMB5 413 aa11.3□□□□□ -0.6
GACAT3-201ENST00000426539 ANO5Q75V66 913 aa11.3□□□□□ -0.6
GACAT3-201ENST00000426539 SLC39A11Q8N1S5 342 aa11.3□□□□□ -0.6
GACAT3-201ENST00000426539 LRRC43Q8N309 656 aa11.3□□□□□ -0.6
GACAT3-201ENST00000426539 RNF169Q8NCN4 708 aa11.3□□□□□ -0.6
GACAT3-201ENST00000426539 HELQQ8TDG4 1101 aa11.3□□□□□ -0.6
GACAT3-201ENST00000426539 NLRP7Q8WX94 980 aa11.3□□□□□ -0.6
GACAT3-201ENST00000426539 ZNF558Q96NG5 402 aa11.3□□□□□ -0.6
GACAT3-201ENST00000426539 CDCA3Q99618 268 aaPredicted RBP11.3□□□□□ -0.6
GACAT3-201ENST00000426539 TCF25Q9BQ70 676 aa11.3□□□□□ -0.6
GACAT3-201ENST00000426539 FDXACB1Q9BRP7 624 aaPredicted RBP11.3□□□□□ -0.6
GACAT3-201ENST00000426539 PHF20Q9BVI0 1012 aa11.3□□□□□ -0.6
GACAT3-201ENST00000426539 GJB4Q9NTQ9 266 aa11.3□□□□□ -0.6
GACAT3-201ENST00000426539 PDRG1Q9NUG6 133 aa11.3□□□□□ -0.6
GACAT3-201ENST00000426539 WRAP73Q9P2S5 460 aaPredicted RBP11.3□□□□□ -0.6
GACAT3-201ENST00000426539 DDX25Q9UHL0 483 aaKnown RBP11.3□□□□□ -0.6
GACAT3-201ENST00000426539 VAV3Q9UKW4 847 aa11.3□□□□□ -0.6
GACAT3-201ENST00000426539 MEIS3P2A8K0S8 358 aa11.29□□□□□ -0.6
GACAT3-201ENST00000426539 DDX11L8A8MPP1 907 aa11.29□□□□□ -0.6
GACAT3-201ENST00000426539 MAFO75444 373 aaPredicted RBP11.29□□□□□ -0.6
GACAT3-201ENST00000426539 EOMESO95936 686 aa11.29□□□□□ -0.6
GACAT3-201ENST00000426539 EARS2Q5JPH6 523 aaKnown RBP11.29□□□□□ -0.6
GACAT3-201ENST00000426539 PLA2G4FQ68DD2 849 aa11.29□□□□□ -0.6
GACAT3-201ENST00000426539 GALNT17Q6IS24 598 aa11.29□□□□□ -0.6
GACAT3-201ENST00000426539 ANKRD54Q6NXT1 300 aa11.29□□□□□ -0.6
GACAT3-201ENST00000426539 KRT25Q7Z3Z0 450 aa11.29□□□□□ -0.6
GACAT3-201ENST00000426539 KSR1Q8IVT5 923 aa11.29□□□□□ -0.6
GACAT3-201ENST00000426539 ABI1Q8IZP0 508 aa11.29□□□□□ -0.6
GACAT3-201ENST00000426539 FAM177A1Q8N128 213 aaPredicted RBP11.29□□□□□ -0.6
GACAT3-201ENST00000426539 OXER1Q8TDS5 423 aa11.29□□□□□ -0.6
GACAT3-201ENST00000426539 EDAQ92838 391 aa11.29□□□□□ -0.6
GACAT3-201ENST00000426539 SCLT1Q96NL6 688 aa11.29□□□□□ -0.6
GACAT3-201ENST00000426539 TRAIPQ9BWF2 469 aa11.29□□□□□ -0.6
GACAT3-201ENST00000426539 PHF7Q9BWX1 381 aaPredicted RBP11.29□□□□□ -0.6
GACAT3-201ENST00000426539 GCOM2Q9BZD3 368 aaPredicted RBP11.29□□□□□ -0.6
GACAT3-201ENST00000426539 KCNMB3Q9NPA1 279 aa11.29□□□□□ -0.6
GACAT3-201ENST00000426539 SPG21Q9NZD8 308 aa11.29□□□□□ -0.6
GACAT3-201ENST00000426539 SUCLA2Q9P2R7 463 aaPredicted RBP11.29□□□□□ -0.6
GACAT3-201ENST00000426539 TPCN1Q9ULQ1 816 aa11.29□□□□□ -0.6
GACAT3-201ENST00000426539 MYH9P35579 1960 aaKnown RBP11.28□□□□□ -0.6
GACAT3-201ENST00000426539 NT5C1B-RDH14C9J2C7 533 aa11.28□□□□□ -0.6
GACAT3-201ENST00000426539 CTDNEP1O95476 244 aa11.28□□□□□ -0.6
GACAT3-201ENST00000426539 TECP42680 631 aa11.28□□□□□ -0.6
GACAT3-201ENST00000426539 PHKA2P46019 1235 aa11.28□□□□□ -0.6
GACAT3-201ENST00000426539 NPEPPSP55786 919 aa11.28□□□□□ -0.6
GACAT3-201ENST00000426539 PSMC5P62195 406 aa11.28□□□□□ -0.6
GACAT3-201ENST00000426539 PPP2R5CQ13362 524 aa11.28□□□□□ -0.6
GACAT3-201ENST00000426539 LETM2Q2VYF4 491 aa11.28□□□□□ -0.6
GACAT3-201ENST00000426539 IER5LQ5T953 404 aa11.28□□□□□ -0.6
GACAT3-201ENST00000426539 LLGL2Q6P1M3 1020 aa11.28□□□□□ -0.6
GACAT3-201ENST00000426539 TMEM173Q86WV6 379 aaPredicted RBP11.28□□□□□ -0.6
GACAT3-201ENST00000426539 HAS1Q92839 578 aa11.28□□□□□ -0.6
GACAT3-201ENST00000426539 LPPQ93052 612 aa11.28□□□□□ -0.6
GACAT3-201ENST00000426539 FBXL18Q96ME1 805 aa11.28□□□□□ -0.6
GACAT3-201ENST00000426539 APOL5Q9BWW9 433 aa11.28□□□□□ -0.6
GACAT3-201ENST00000426539 NGRNQ9NPE2 291 aaKnown RBP11.28□□□□□ -0.6
GACAT3-201ENST00000426539 ENTPD7Q9NQZ7 604 aa11.28□□□□□ -0.6
GACAT3-201ENST00000426539 CHST12Q9NRB3 414 aa11.28□□□□□ -0.6
GACAT3-201ENST00000426539 PUF60Q9UHX1 559 aaKnown RBP11.28□□□□□ -0.6
GACAT3-201ENST00000426539 CDH22Q9UJ99 828 aa11.28□□□□□ -0.6
GACAT3-201ENST00000426539 TECTAO75443 2155 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms