RNA–Protein interactions for RNA: ENST00000426431.2

SP1-202, Transcript of Sp1 transcription factor, humanhuman

TSL 1 (best) BASIC

Gene SP1, Length 7,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-202ENST00000426431 EPHB1P54762 984 aa10.9□□□□□ -0.66
SP1-202ENST00000426431 ITPK1Q13572 414 aa10.9□□□□□ -0.66
SP1-202ENST00000426431 LAMC2Q13753 1193 aa10.9□□□□□ -0.66
SP1-202ENST00000426431 SCARF1Q14162 830 aa10.9□□□□□ -0.66
SP1-202ENST00000426431 CENPUQ71F23 418 aa10.9□□□□□ -0.66
SP1-202ENST00000426431 CALN1Q9BXU9 219 aa10.9□□□□□ -0.66
SP1-202ENST00000426431 ANKEF1Q9NU02 776 aa10.9□□□□□ -0.66
SP1-202ENST00000426431 CD4P01730 458 aa10.9□□□□□ -0.66
SP1-202ENST00000426431 U2AF2P26368 475 aaKnown RBP eCLIP10.9□□□□□ -0.66
SP1-202ENST00000426431 MSH2P43246 934 aa10.9□□□□□ -0.66
SP1-202ENST00000426431 SH3BGRP55822 239 aaPredicted RBP10.9□□□□□ -0.66
SP1-202ENST00000426431 FKBP1AP62942 108 aaKnown RBP10.9□□□□□ -0.66
SP1-202ENST00000426431 BANK1Q8NDB2 785 aa10.9□□□□□ -0.66
SP1-202ENST00000426431 PIGOQ8TEQ8 1089 aa10.9□□□□□ -0.66
SP1-202ENST00000426431 GPRASP2Q96D09 838 aa10.9□□□□□ -0.66
SP1-202ENST00000426431 KIF9Q9HAQ2 790 aa10.9□□□□□ -0.66
SP1-202ENST00000426431 ADARB2Q9NS39 739 aaKnown RBP10.9□□□□□ -0.66
SP1-202ENST00000426431 RYBPQ8N488 228 aaPredicted RBP10.9□□□□□ -0.66
SP1-202ENST00000426431 VCX3AQ9NNX9 186 aa10.9□□□□□ -0.66
SP1-202ENST00000426431 IP6K2Q9UHH9 426 aa10.9□□□□□ -0.66
SP1-202ENST00000426431 POTEMA6NI47 508 aa10.9□□□□□ -0.66
SP1-202ENST00000426431 CPT1AP50416 773 aa10.9□□□□□ -0.66
SP1-202ENST00000426431 CACNB1Q02641 598 aaPredicted RBP10.9□□□□□ -0.66
SP1-202ENST00000426431 CLEC17AQ6ZS10 378 aa10.9□□□□□ -0.66
SP1-202ENST00000426431 MICAL1Q8TDZ2 1067 aa10.9□□□□□ -0.66
SP1-202ENST00000426431 BAG5Q9UL15 447 aa10.9□□□□□ -0.66
SP1-202ENST00000426431 DPYSL4O14531 572 aa10.9□□□□□ -0.66
SP1-202ENST00000426431 RALAP11233 206 aa10.9□□□□□ -0.66
SP1-202ENST00000426431 STX1BP61266 288 aa10.9□□□□□ -0.66
SP1-202ENST00000426431 ITPRIPL1Q6GPH6 555 aa10.9□□□□□ -0.66
SP1-202ENST00000426431 C11orf57Q6ZUT1 292 aaPredicted RBP10.9□□□□□ -0.66
SP1-202ENST00000426431 RHPN2Q8IUC4 686 aa10.9□□□□□ -0.66
SP1-202ENST00000426431 PAPOLAP51003 745 aaKnown RBP10.9□□□□□ -0.67
SP1-202ENST00000426431 RAD51Q06609 339 aa10.9□□□□□ -0.67
SP1-202ENST00000426431 MKRN3Q13064 507 aaKnown RBP10.9□□□□□ -0.67
SP1-202ENST00000426431 R3HDM1Q15032 1099 aaKnown RBP10.9□□□□□ -0.67
SP1-202ENST00000426431 ALS2CLQ60I27 953 aa10.9□□□□□ -0.67
SP1-202ENST00000426431 PHLDB3Q6NSJ2 640 aa10.9□□□□□ -0.67
SP1-202ENST00000426431 SCYL3Q8IZE3 742 aa10.9□□□□□ -0.67
SP1-202ENST00000426431 ZDHHC15Q96MV8 337 aa10.9□□□□□ -0.67
SP1-202ENST00000426431 AGO2Q9UKV8 859 aaKnown RBP10.9□□□□□ -0.67
SP1-202ENST00000426431 SYNJ2BP-COX16A0A087WUM0 186 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 GPC4O75487 556 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 ALDH1A1P00352 501 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 CD58P19256 250 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 SDC4P31431 198 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 YWHABP31946 246 aaKnown RBP10.89□□□□□ -0.67
SP1-202ENST00000426431 GUCY2DQ02846 1103 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 SLC35F6Q8N357 371 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 PHF20Q9BVI0 1012 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 COX16Q9P0S2 106 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 SYNPO2Q9UMS6 1093 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 LARGE1O95461 756 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 GMPSP49915 693 aaPredicted RBP10.89□□□□□ -0.67
SP1-202ENST00000426431 IQCB1Q15051 598 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 TTC31Q49AM3 519 aaPredicted RBP10.89□□□□□ -0.67
SP1-202ENST00000426431 FMR1NBQ8N0W7 255 aaPredicted RBP10.89□□□□□ -0.67
SP1-202ENST00000426431 DAGLBQ8NCG7 672 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 ELP3Q9H9T3 547 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 GGA3Q9NZ52 723 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 PITPNM2Q9BZ72 1349 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 NWD1Q149M9 1564 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 KIF28PB7ZC32 967 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 PSMD14O00487 310 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 EIF3DO15371 548 aaKnown RBP eCLIP10.89□□□□□ -0.67
SP1-202ENST00000426431 P4HA2O15460 535 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 HBP1O60381 514 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 KPNA6O60684 536 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 ZNF157P51786 506 aaPredicted RBP10.89□□□□□ -0.67
SP1-202ENST00000426431 FBXL13Q8NEE6 735 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 ARHGEF2Q92974 986 aaKnown RBP10.89□□□□□ -0.67
SP1-202ENST00000426431 MROH8Q9H579 483 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 IQANK1A0A1B0GTG1 560 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 CARNS1A5YM72 827 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 ZRANB2O95218 330 aaKnown RBP eCLIP10.89□□□□□ -0.67
SP1-202ENST00000426431 APOEP02649 317 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 KCNJ6P48051 423 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 KIAA1755Q5JYT7 1200 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 ANGEL2Q5VTE6 544 aaKnown RBP10.89□□□□□ -0.67
SP1-202ENST00000426431 HAUS6Q7Z4H7 955 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 SMYD4Q8IYR2 804 aaPredicted RBP10.89□□□□□ -0.67
SP1-202ENST00000426431 AIFM3Q96NN9 605 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 NUDT12Q9BQG2 462 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 SAMSN1Q9NSI8 373 aaKnown RBP10.89□□□□□ -0.67
SP1-202ENST00000426431 KCNH2Q12809 1159 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 LAMB3Q13751 1172 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 RUBCNQ92622 972 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 DPH5Q9H2P9 285 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 RBAKQ9NYW8 714 aaPredicted RBP10.89□□□□□ -0.67
SP1-202ENST00000426431 POTEB3A0JP26 581 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 POTECB2RU33 542 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 GUCY2FP51841 1108 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 OSTNP61366 133 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 SNX17Q15036 470 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 EDRF1Q3B7T1 1238 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 POTEBQ6S5H4 581 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 FAM83AQ86UY5 434 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 FAN1Q9Y2M0 1017 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 SALL1Q9NSC2 1324 aa10.89□□□□□ -0.67
SP1-202ENST00000426431 SLC16A4O15374 487 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms